Monodelphis domestica (gray short-tailed opossum): 100021320
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Entry
100021320 CDS
T01031
Symbol
TRPC4
Name
(RefSeq) transient receptor potential cation channel subfamily C member 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04360
Axon guidance
mdo04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100021320 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
100021320 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdo04040
]
100021320 (TRPC4)
Ion channels [BR:
mdo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100021320 (TRPC4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100021320
NCBI-ProteinID:
XP_001368084
Ensembl:
ENSMODG00000010167
UniProt:
F6TA59
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All DBs
Position
4:complement(311243580..311521770)
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AA seq
975 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMLTCVIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRDSWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKELSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLLKWIWTHLCKKKIRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGSKLASLRSSKIMKEPPLEAEEKSD
SEGSDKTKKKNFSLFDITSMIHPRSAAIASERHNVSNGAALMVHETPKEKQKKVNFVADV
KHFGLFHKRSKPHSAEASANQIFSVSEEVSRQQADEEFGKHFQLEARGLATKGERSVAGL
SEPCVLSDTKRRNRETLNLPFGESLCPLESEKLVVEDTVPIIPKDMHAKEEASAKDCELK
ITETVIHEDYVTTRL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctactacaaaaggaatgtcaatgctccctacagagatcgcattcctctt
cggattgtaagagcagaatctgaactctcgccctcagaaaaagcctacttgaatgctgtg
gagaagggggattatgcaagtgtcaagaaatctctggaggaggcagaaatttattttaaa
ataaacattaattgtattgatccccttggaagaactgctcttctcattgcaattgaaaat
gagaacctggagcttattgaattgctcctaagttttaatgtgtatgttggagatgctcta
ttacatgccatcagaaaggaagttgtgggggctgtggagctgctattaaaccacaagaaa
cccagtggagagaaacaggtgcctccaatactccttgataagcagttctctgaattcaca
ccagatatcacaccaataattttggcagcccatacaaataattatgagataataaaactc
ttagtccagaaaggtgtttctgtacctagacctcatgaagttcgctgtaattgtgttgaa
tgtgtctccagttcagatgtagacagcctccgtcattctcgttctagattaaatatatac
aaagccttggcaagtccatctctgattgcattgtcaagtgaggatccatttctcacagct
tttcaactcagttgggagcttcaagaactgagcaaagtggaaaatgaatttaagtctgaa
tatgaagaactatcccgacagtgcaaacaatttgctaaggaccttctggatcagaccagg
agttccagggagttggaaatcatcctgaattatagagatgataacagcttgatagaagaa
caaagtggaaatgatcttgcaagactcaagttggctataaagtaccgacaaaaagagttt
gttgcacaaccgaactgtcagcagctccttgcatctcgctggtatgatgagtttccaggc
tggaggagaagacactgggctgtgaagatgttgacatgcgtcatcataggactgcttttc
cctgtcttctctgtatgctacctgatagcccccaaaagtccccttggactcttcatcagg
aaaccatttatcaagtttatctgccatacggcatcctatttgactttcttgttcctgctg
ctacttgcctctcaacatattgacaggtcagacttgaacaggcaggggccaccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggattcatatggggtgaaattaaacag
atgtgggatggtggacttcaagattacatccatgactggtggaatctaatggattttgta
atgaattccttatacttggcaacaatctctttgaaaatcgttgcatttgtaaagtatagt
gcactgaacccccgagattcctgggatatgtggcaccccactttggtggcagaggcttta
tttgctatcgcaaacattttcagttccctgcgtctgatctcactgtttactgccaattct
cacctgggacctctgcagatctctctaggaagaatgctgctagacattctgaagtttctg
ttcatatactgtcttgtgctactagcttttgcaaatggcttaaatcagttgtacttctat
tatgaagaaacaaaagaattaagttgcaaaggaatacggtgtgagaaacagaacaatgcc
ttttccacgttatttgagacacttcagtctctattttggtccatatttggactcattaat
ctttatgtgaccaatgtcaaggcacagcatgaatttacagagtttgttggggccaccatg
tttgggacatacaatgtcatctctctagtcgttctactcaacatgctcattgctatgatg
aataattcttatcaactcattgctgatcatgcagacattgaatggaaatttgcacggaca
aaactatggatgagttattttgaagaaggaggtactctgcctactcccttcaatgtcatc
ccaagccccaagtctctctggtatcttctcaaatggatctggacacacctatgcaagaaa
aagattagaaggaaaccagaaagttttggaacaatagggaggcgggcagctgataattta
agaagacaccatcagtaccaggaagttatgaggaacttggtgaagagatatgttgcagca
atgattagagatgctaaaactgaagaaggtctgacagaggaaaattttaaggagctaaag
caagatatttcaagctttcgttttgaagtcctgggattgctgaaaggaagcaagcttgcc
tctttacgatcttcaaaaatcatgaaggagcctccattggaggctgaggagaagagtgac
agtgaagggagcgacaagacaaagaaaaagaatttcagcctctttgatatcactagcatg
attcatccaaggtcagcagccattgcttcagaaagacataacgtgagcaatggtgctgcc
ctcatggttcatgaaacccccaaagagaagcagaagaaagtgaactttgtggcagatgtc
aaacactttgggctgtttcataaacgctcgaaaccacactctgcagaggcaagcgccaac
cagatcttctcggtttcagaggaagtttcccgacaacaggctgatgaagaatttggaaaa
cattttcaactggaagcaagaggactggccaccaaaggtgaacggagtgttgcaggactc
agtgaaccatgtgtgttatcagacacaaaaagaaggaacagagagactttgaatttacct
tttggggagagcctttgtcccttagaatcagagaagttggtggtagaggacactgtgccc
ataataccaaaggacatgcatgctaaggaagaggccagtgctaaagactgtgaattaaaa
atcacagagacagtgatacacgaagactatgtaacaacaagattgtga
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