Monodelphis domestica (gray short-tailed opossum): 100021379
Help
Entry
100021379 CDS
T01031
Symbol
CTR9
Name
(RefSeq) CTR9 homolog, Paf1/RNA polymerase II complex component
KO
K15176
RNA polymerase-associated protein CTR9
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdo03021
]
100021379 (CTR9)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
100021379 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
MG280
Motif
Other DBs
NCBI-GeneID:
100021379
NCBI-ProteinID:
XP_001367572
Ensembl:
ENSMODG00000008303
UniProt:
A0A5F8GAC2
LinkDB
All DBs
Position
5:250578133..250606819
Genome browser
AA seq
1168 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQDKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEAEGTKE
KKRGGGGGGGRRSKKGGEFDEFVNDDTDEDMPVSKKKKKRKGSGSEQEGEEEEGERKKKK
RRRPPKGDDGSDEEETENGPRPKKRRTPRVEKKKAPKPERLPPSMKGKIKSKAIISSSDD
SSDEDKLKIADEGHARNSNSDSDDGDLRKKRVMSESDSDENPNQSGSEAGSPRRSSMQQS
EEDSDSDRSAPKRRRSVSEQSDNESVQSGRSHSAGSDNESRPASPSADSDRESERASDNE
ASARGSGNDSEPEASNNEASERGSDDSD
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgagggtccattgagattcccctccgggacactgacgaggtcattgaacttgac
tttgatcagttaccggagggggatgaagttatcagtattctgaaacaggaacatactcag
ctacacatatggattgccttagcgctggaatattataagcaaggcaaaacagaagatttt
gtgaagctgttggaagcagcacgaatagatggcaacctggattatagagaccatgaaaaa
gaccagatgacttgcctagatacgttggcagcctactatgtacagcaggccaggaaagaa
aaaaacaaggacaacaagaaagagctcatcacacaggcaaccttgttgtatacaatggct
gacaaaattatcatgtatgatcagaaccatttattaggaagagcctgcttttgtcttttg
gaaggtgacaaaatggaccaagctgatgcacaatttcattttgtacttaatcagtctcca
aataatataccagcccttcttggtaaagcttgtatttcattcaataagaaagattataga
ggagcccttgcatattataaaaaagctctacgtaccaacccaggatgtccagcggaagtt
cgcctaggtatgggacattgctttgtgaagctaaacaaactggagaaagctcgtctggca
ttcagcagggccctggagctcaactccaagtgtgtgggagcattagttggattggctgtc
ctagaacttaataataaagaggctgactctatcaaaaatggcgtccagcttctttcccga
gcttacacaatagatcctagcaatcctatggtactaaaccatttggcaaatcactttttc
ttcaaaaaggattatagcaaagtccagcacttggctctccatgctttccataacacagag
gtggaagctatgcaggcagaaagctgttatcagctggccaggtccttccatgttcaggaa
gactatgatcaagctttccagtactactatcaagccacccagtttgcctcgtcctctttt
gtactaccctttttcggtttaggtcagatgtatatttaccgaggtgacaaggagaatgcg
tctcagtgctttgagaaagttttgaaagcctatcccaataattatgagacgatgaaaatt
cttggctctctctatgctgcctctgaagatcaagacaaacgagacattgccaagggccac
ttgaagaaagtcacagagcaatatccagatgatgttgaggcttggattgaactggcacaa
atcctagagcagaccgacatacaaggtgccctctcagcatatggaacagcaacacgaatc
ctacaagagaaggtacaggccgacgtcccaccagagattctgaataatgtgggtgccctc
cattttaggcttggaaacttaggggaggcaaagaaatattttttggcatctttggatcgt
gccaaggcagaagctgagcatgatgaacattactataatgctatctcagttacaacgtcg
tacaatctggccaggctttatgaggcaatgtgtgaattccacgaagcagaaaaattgtat
aaaaatatactacgagagcatcctaattatgttgactgctatttgcgtttaggagcaatg
gctagagataaaggaaacttttatgaggcttcagattggtttaaggaagcccttcagatc
aaccaggaccatccagatgcttggtctctgattggcaatcttcatttggccaagcaagaa
tggggtccaggtcagaagaaatttgaaagaatattaaagcaaccatcaactcaaaatgac
acatattcaatgctggcccttggcaatgtttggctacagactttgcatcaacccaccaga
gaccgagagaaggaaaaacgacatcaggatcgtgcactagccatctacaagcaagtcctc
agaaatgatcctaagaacctctatgctgccaatggcataggtgctgtgctggcccacaaa
ggatatttccgtgaggctcgtgatgtatttgcccaagtaagagaggcaactgcagatatc
agtgacgtgtggctaaatttagcacacatatatgtagagcagaagcagtatatcagtgct
gttcagatgtatgaaaactgcctccggaagttctacaaacaccagaacacagaggttgtt
ctgtatttggcccgggcccttttcaagtgtggcaagctgcaggagtgcaaacagactttg
cttaaggctagacatgtggcccccagtgatacagttctcatgttcaatgtggctctggta
cttcagaggctagcgacttctgtccttaaggatgaaaagagtaatctcaaggaagtgctt
aatgcagttaaagaactggaacttgcccacaggtattttagttatttgagcaaagtagga
gacaaaatgagatttgacttggcccttgctgctacagaagccaggcaatgctctgattta
ctgagccaggctcagtaccatgtggctcgagcacgcaaacaggatgaagaggaaagagag
cttcgggccaaacaggagcaagagaaggaactattacggcaaaaactgctgaaggaacag
gaagagaaacgccttcgagagaaagaagagcagaagaaactccttgagcagcgagcccag
tatgtggagaagaccaagaacatcctcatgttcacaggagaagccgaagggacgaaggaa
aaaaagagaggtggcggcggcggtgggggcaggcgttctaaaaagggaggtgagtttgat
gaatttgttaatgatgacactgatgaagatatgcctgtgtccaagaagaagaaaaagagg
aagggcagtgggagtgaacaagaaggagaagaagaggaaggcgagagaaagaagaaaaag
cggaggagaccaccaaagggagatgatggatctgatgaggaagaaactgaaaatggcccc
aggccgaaaaaacgtcgcacacctagagtagaaaaaaagaaggctcctaagccagaacga
ttgcctccttcaatgaagggaaaaataaagtcaaaagccataatctcatcaagtgatgat
tcttcagatgaagataaacttaaaattgctgatgagggacatgctaggaacagcaatagt
gattcagatgatggtgatctgcgcaagaaacgtgtcatgtctgagagtgattctgatgag
aatccaaaccagtctgggagtgaagctggcagccctcggagatccagcatgcagcagtca
gaggaagactctgatagtgaccgatcagctccaaagagaaggcgctctgtatctgaacaa
tctgacaacgagtccgtccagtcgggaaggagccactctgcaggttcggacaatgaatcc
cggccagcttcaccaagtgctgattctgaccgggagtctgaaagagcttctgataatgag
gcttctgcaaggggctctgggaatgactcagaaccagaagcctccaacaatgaggcctca
gaacgaggttctgatgatagcgattag
DBGET
integrated database retrieval system
