KEGG   Monodelphis domestica (gray short-tailed opossum): 100021566
Entry
100021566         CDS       T01031                                 
Symbol
NLE1
Name
(RefSeq) notchless homolog 1
  KO
K14855  ribosome assembly protein 4
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mdo03009]
    100021566 (NLE1)
Ribosome biogenesis [BR:mdo03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    100021566 (NLE1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_Gbeta EIF3I Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd WDR55 DSE1_N WDR90_beta-prop_4th Beta-prop_Aladin ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st ASA1 Beta-prop_WDR41 NLE WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st NBCH_WD40 CFAP251_N Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_NOL10_N Beta-prop_DCAF12 PAC11 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 WD40_RFWD3 Ge1_WD40 Tricorn_2nd eIF2A RMC1_N PD40 Beta-prop_RIG_1st TRM82_WD Beta-prop_NWD2_C Beta-prop_WDR75_2nd Cytochrom_D1 KNTC1_N FAD_binding_9
Other DBs
NCBI-GeneID: 100021566
NCBI-ProteinID: XP_016285133
Ensembl: ENSMODG00000019137
LinkDB
Position
2:499516815..499527724
AA seq 585 aa
MHREIDFEFLVHTICVTVGKLPRILESPHPELIRPALSQLQQRLTRDPAAPPGGRVRPGR
VWRRSAGSALGLRSRFTPRGDSGWRRKLQRSHAFHECPWQDEGCRRGEGLRGDVQRLLVQ
FQDEGGQLLGSPFDVPVDITPDKLQLVCNALLGKEDPLPLAFYIHDSEIVTSLEKTLESK
PVETEKVLDIIYQPQAVFRVRAVARCTSSLEGHSEAVISVAFSPTGKYLASGSGDSTVRF
WDLSTETPHFTSRGHRHWVLSIAWSPDGKKLASGCKNGQILLWDPNTGQQLGRGLAGHSK
WITGLSWEPLHMNPECRYVASSSKDGSVRIWDTSMGRCDRILTGHTQSVTCVRWGGDGLL
YSASQDRTIKVWRPHDGVLCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEASINAQDVRG
SLQELKQRALDRYNQIRGLGPERLVSGSDDFTLFLWSPAEDKKPLQRMTGHQALINEVLF
SPDARIIASASFDKSVKLWDSKTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKV
WDVKTRKLAVDLPGHADEVFAVDWSPDGQRVASGGKDKCLRIWRR
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgcatcgagagatagacttcgaattcctggtccatactatttgtgtgaccgtgggcaag
ttgcctcggattctggagtctccccacccagagctgatacgccccgccctctctcagtta
cagcaaaggctgacgcgagatcccgccgctccaccagggggcagagtgcgccctgggagg
gtatggaggcgcagtgcaggcagcgctctaggcctccggtctcgtttcactccacgtggg
gactcgggatggcggcggaagctacagcgctctcacgctttccacgagtgtccgtggcag
gacgaaggctgcaggaggggcgaggggctgcgtggggatgtgcagaggctgctggtccag
ttccaagatgagggcgggcagctgctgggctcgcccttcgacgtgcccgtggacatcacc
ccagacaagctccagctcgtctgtaatgcgctgctgggcaaggaggatccgctccccttg
gccttttacatccacgattcggaaatcgtcacctctctggagaagacgctggagtccaag
ccggtggagacggagaaggtcctcgacatcatttaccagccgcaggcggtgttccgggtg
cgagctgtggcacgctgcaccagctccctggagggtcactccgaggccgtcatctctgtg
gccttcagccccactggaaagtacctggccagcggctccggagacagcaccgtgcgcttc
tgggacctctctacagagacgccgcacttcacgtccagggggcacagacactgggtcctc
agcatcgcctggtccccggatggcaagaagctggcctcgggctgtaagaacggccaaatt
ctcctgtgggacccaaacacggggcagcagttgggcaggggcctcgctggacatagcaag
tggatcacagggctcagctgggagcccttgcacatgaaccctgaatgtcgctacgtggcc
agcagctccaaggatggcagcgtccggatctgggacacgtccatgggccggtgcgaccgc
atcctcactggacacactcagtctgtcacctgcgtcagatggggaggggatggccttctc
tactcggcctcccaagaccggaccatcaaagtgtggcgacctcacgacggggtgctctgc
aggaccctccagggccatgctcactgggtaaacaccatggccctcagcactgactatgtc
ctccgaacgggggccttcgagccagcggaggcctccatcaatgcccaggatgtccggggc
tccttgcaggagctgaagcagagagcgctggaccggtacaaccagattagggggctgggg
ccagagaggttggtttcgggttccgatgacttcacgctgttcctgtggtcacccgccgag
gacaagaagcccctccagcggatgacgggacaccaagccctcatcaatgaggtgctcttc
tcccctgatgctcggatcatcgccagcgcctcctttgacaagtcggtcaagttgtgggac
agcaagacgggcaagtacctggcctccctccgaggccacgtggcagccgtgtaccagatc
gcctggtccgcagacagccggctcctggtgagcgggagcagcgacagtaccctcaaggtg
tgggatgtgaagactcggaagttggccgtggacctccctggtcatgctgatgaggtgttt
gctgtggactggagtccagatggccagcgggtagcaagtggtgggaaggacaaatgtctc
cgcatatggaggaggtga

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