Monodelphis domestica (gray short-tailed opossum): 100021743
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Entry
100021743 CDS
T01031
Symbol
TRPM1
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdo04040
]
100021743 (TRPM1)
Ion channels [BR:
mdo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100021743 (TRPM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
YVC1_C
LSDAT_prok
Glutaredoxin2_C
EBNA2_Core
RedAm-like_C
Motif
Other DBs
NCBI-GeneID:
100021743
NCBI-ProteinID:
XP_016284003
Ensembl:
ENSMODG00000011776
LinkDB
All DBs
Position
1:complement(142406362..142604719)
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AA seq
1685 aa
AA seq
DB search
MGTKKGKGGKLAGSLRRMSGSFKHTSLRSSASGSQKGQKAWIEKTFSKRECIYTIVSSKD
PNRCCCGLLISQHIPPLPSSTPNKNAEENKQVEAAQPEKWSISKHTQLYPTDSYGMLEFQ
GGGHSNKAMYIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQNFEMQPKLKQIFGK
GLIKAAMTTGAWIFTGGVSTGVISHVGDALKDHSSKSRGRICAIGIAPWGIVENKEDLIG
KDVTRVYQTMSNPLSKLSVLNNSHTHFILADNGTLGKYGAEVKLRRQLEKHISLQKINTR
LGQGVPVVGVIVEGGPNVISIVLECLREDPPIPVVICDGSGRASDILSFAHKYCEEGGII
NESLKDQLLVTIQKTFNYNKIQSHQLFLIIMECMKKKELVTVFRMGSEGQQDIEMSILTA
LLKGTNASAPDQLSLALAWNRVDIARSQIFVFGPHWPPLGSLAPPDVKATEKEKKSPPAP
AKGGRGKGKGKKKGKIKEEVEEETDPRKIELLNWVNSLEQAMLDALVLDRVDFVKLLIEN
GVNMQHFLTIPRLEELYNTTFILTIITVNFGSAWRLGPPNSLHLLVRDVKKGNLPPDYHI
SLIDIGLVLEYLMGGAYRCNYTRKSFRTLYNNLFGPKRPKALKLLGMEDDEPPTKGKKKK
KKKKEEEIDIDVDDPAVSRFQYPFHELMVWAVLMKRQKMAVFLWQRGEESMAKALVACKL
YKSMAHESSESELVDDISQDLDNNSKDFGQLAVELLDQSYKHDEQIAMKLLTYELKNWSN
STCLKLAVAAKHRDFIAHTCSQMLLTDMWMGRLRMRKNPGLKVIMGILFPPTILFLEFRT
YDDFSYQTSKENEDGKEKEEENMDANADTGSRKGDEENGNKKQRSIPIGTKICEFYNAPI
VKFWFYTISYLGYLLLFNYIILVRMERWPSVQEWIVISYIVTLALEKIREILMSEPGKLS
QKVKVWLQEYWNITDLVAISVFMIGAVLRLQNQPYMGYGRVIYCVDIIFWYIRVLDIFGV
NKYLGPYVMMIGKMMIDMLYFVVIMLVVLMSFGVARQAILHPDEEPSWRLARNIFYMPYW
MIYGEVFADQIDRKSRIHTPCGENLFDEDGKRLPPCIPGAWLTPAIMACYLLVANILLVN
LLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHDRPVLPPPMIILSHLYIIIMRLSGKCR
KKREGDQDERDRGLKLFLNDEELKKLHEFEEQCVEEYFQEKEDEQQSSNDERIRVTTERV
ENMSMRLEEVNEREHFMKTSLQTVDLRLSQLEELSSRMVNALEKLAGIDKSELVPTRSRA
SSECDATFLLRQSSINSSDGYSMYRYHFNGEELFYEDSIIPLSPGPGLRKKTCSFRLKEE
KDGQESRMHLVPECQESLCMISNTNISKTQDCCKITLGDIQNDLPNSGPNIGISAEEDEK
FGNSKNDEIISQGLSQTDIINGQARPDFQNTQLKVDKTKLEGAISYPLDKTKVTRYYPDE
TLKTTMKSRSFVFSHERKLIGGVNNWSTDYSSIMDQVCPTTVEQWTTEWKYQIEKKISQS
HSTDFPLNVSEAAMQAEQKEHLTDTEDEIDVTEAVPKASRSSLAVIGRTATTTENLLSVK
PHRPGGFQSVRSKSLHAHSRTAKSIQDKLDRPGHASSVTNLVVVSDSKVETQKAKQEKAS
TETEC
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgggaactaaaaaggggaaaggaggaaagctcgcaggctccttaaggaggatgagtggt
tccttcaagcacacttcactcaggagttcagcatctggatcccaaaagggacaaaaagct
tggatagagaagaccttttccaaaagagaatgcatctacacaattgtcagcagtaaagat
cctaacaggtgttgctgtggcctgcttatttcccaacatattccacctcttccaagtagc
actcccaacaaaaatgcagaggaaaataaacaagtggaggcagcacagccagagaaatgg
tctatcagtaaacatacccaactctatccaacagattcttatgggatgctggaatttcag
ggtggtggacattcaaacaaagcaatgtatatccgtgtgtcatatgacaccaaaccggat
tcacttcttcatcttatggtgaaagactggcaactagaacttcccaagcttttaatctct
gttcatgggggactccagaactttgagatgcagcccaagctgaagcagatatttggaaaa
ggactaatcaaagctgccatgacaacaggagcctggattttcactggaggtgtcagtact
ggtgtcattagccatgtaggtgatgccttgaaagaccattcttcaaagtccaggggcagg
atttgtgccataggaattgctccatggggcattgtggaaaacaaggaagacctcattgga
aaggatgtaacaagggtttatcaaaccatgtcaaaccctttaagtaaactttctgtacta
aacaactctcatactcacttcatcttggcggataatggcacacttggcaaatatggagca
gaagtgaagctccggcggcaattggaaaaacatatctctttacaaaagattaacacacga
ctgggacaaggtgttcctgttgttggtgttatcgttgaagggggtcctaatgtgatttcc
attgtcctggaatgtcttcgagaagatccccctattcctgttgtgatttgtgatggcagt
gggcgagcatcagacattttgtcttttgcacacaaatactgtgaagaaggagggataata
aatgaatccctcaaggatcaacttctagttaccattcagaaaacatttaactacaacaag
attcaatctcatcagctctttttaattatcatggagtgtatgaaaaagaaagaacttgtt
actgtgtttcgaatgggttcagaaggtcaacaagatattgaaatgtcaattttaactgct
ctgctaaagggtacaaatgcatcagctcctgatcagctgagtctggctcttgcctggaac
cgtgttgacattgcacgaagtcagatctttgtctttggaccccattggccgcctttagga
agcctggcacctcctgatgtcaaagcaactgagaaggaaaagaaatctccacctgcacca
gccaaggggggcagaggaaaaggaaaaggaaaaaagaaaggaaaaatcaaagaagaagta
gaagaagaaactgatccacgaaagattgagctcctaaactgggtgaattctctagagcaa
gctatgttggatgctttggtcttagatcgggttgactttgtaaaacttcttattgaaaat
ggagtcaacatgcaacactttcttactattccacggctagaggaactttataatacaact
tttattctcaccattatcacagttaactttggcagtgcatggaggcttggcccaccaaac
tcacttcatttgcttgtgagggacgtgaaaaagggaaacctcccaccagattatcacatt
agcctgatagatataggtcttgttctagaatacctcatgggtggggcctaccgctgcaac
tacactcggaagagttttcggaccttgtacaacaacttgtttggaccaaagaggcctaag
gctcttaaacttctcgggatggaggatgatgagccacctaccaaagggaaaaagaagaag
aagaagaaaaaggaagaggagatagacattgatgtggatgaccctgcagtcagtcgtttc
caatatcccttccatgagcttatggtgtgggctgtactgatgaagcgccaaaagatggca
gtattcttgtggcagcgaggggaagagtccatggccaaggccctagtggcatgtaaactc
tataaatccatggcccatgaatcatcagagagtgagctagttgatgacatttctcaggat
ttggacaacaattcaaaagactttggccagctagctgttgagctcttagaccaatcttat
aaacatgatgaacagattgccatgaaactcctgacctatgagctaaaaaactggagcaac
tccacctgcttgaaattggctgtggcagccaaacacagagatttcatcgcccacacctgt
agccaaatgctattaacagatatgtggatgggaaggctccggatgaggaaaaacccaggc
cttaaggttataatggggattcttttcccccctacaattttgttcttggaatttcgtacc
tatgatgacttttcatatcaaacatcaaaggaaaatgaagatggcaaagaaaaagaagag
gagaacatggatgcaaatgctgatactggttcaagaaaaggggatgaggagaatgggaac
aaaaaacaaaggagtattcctattggaactaagatttgtgaattctataatgcccctatt
gtcaaattttggttttacacaatatcctatctgggctacctgctgctatttaattatatt
attttggtgagaatggaaagatggccctctgtccaagaatggattgttatctcctatatt
gtgacccttgctttagagaaaataagagagatattaatgtcagaaccaggaaaactcagt
cagaaagtgaaagtctggcttcaggaatactggaatattactgaccttgtggccatctca
gtgttcatgattggggcagttcttcgccttcagaaccagccatacatgggctatggcaga
gtaatctattgtgtggatatcatcttctggtacatcagagtcctggatatctttggtgta
aacaaatacctgggcccctatgttatgatgattggaaagatgatgattgacatgctctat
tttgtggtcatcatgctggttgtcctgatgagctttggagtagcccgacaagccatttta
catccagatgaagaaccttcttggagactagcccgtaacatcttctacatgccctactgg
atgatctatggagaggtgtttgcagaccagatagaccgtaagagtagaattcatactcct
tgtggagaaaacctgtttgatgaagatggtaaaagacttcctccctgcattccgggggcc
tggctcacccctgctatcatggcttgttatctcttggtagctaatattctcttggtcaat
ctgttaatagctgttttcaacaataccttttttgaggtaaagtcaatatcgaatcaagtt
tggaaatttcagagatatcagctgatcatgacatttcatgacaggccagtcttacctcca
cctatgattatcttgagccacctctacataatcatcatgcgcctcagtggcaaatgtaga
aaaaagagagaaggggaccaagatgaacgagatcggggattgaagttatttcttaatgat
gaagaacttaagaagctgcatgaatttgaggaacaatgtgtagaggaatactttcaagaa
aaagaagatgagcagcagtcatccaatgatgagaggatccgagttacaactgaaagagtt
gaaaacatgtcaatgaggttagaagaagtaaatgaaagagaacattttatgaaaacttca
ctacaaactgtggaccttcgactctctcaactggaagaactatcaagtagaatggtgaat
gctcttgaaaagcttgcgggaattgataaatctgagctggtaccaacacgttccagagca
tcttcagaatgtgatgcaacttttcttctaagacaaagtagtatcaatagttctgatggc
tatagcatgtatcgatatcatttcaatggagaagagttattttatgaggatagcatcatt
cctctgtcaccaggtcctggattgcgtaaaaaaacctgttcatttcgcctaaaggaagag
aaggatggtcaggaatcaaggatgcatttggtaccagaatgtcaggaaagcctttgtatg
atatccaacacaaatatatcaaagacacaagattgctgtaagatcacattaggcgatata
cagaatgatttaccaaactctggtccaaatattggtatttcagctgaagaagatgaaaaa
tttggaaattcaaaaaatgatgaaattatttcccaaggcttaagtcaaacagatattata
aatggacaggccagaccagattttcagaacactcagttaaaagtagacaagacaaagtta
gaaggagcaatttcttacccattagacaaaacaaaagtaacacgttactaccctgatgaa
actttaaagacaactatgaagtctagaagctttgttttttcccatgaaagaaagctaatt
ggaggggttaataactggagtacagattatagttcaattatggatcaagtatgccctaca
acagttgaacagtggactacagaatggaaataccaaatagaaaagaaaatttctcaatcc
catagtacagatttccctttaaatgtttctgaagctgcaatgcaagcagaacaaaaagag
cacttaacagacacagaagatgaaattgatgttacagaagcagttcccaaagcctctcgt
tcttctctagctgttattggcagaactgcaactaccacagaaaacttattgtctgtgaaa
ccacacaggcctggtggattccaatctgtaaggtccaaaagtttacatgctcattctcgg
actgctaagtccattcaggacaaattggacagaccagggcatgccagcagtgtaactaac
ctagtagttgtgtctgatagtaaagtagaaacacaaaaagctaaacaagagaaagcctcc
acagagactgaatgttaa
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