Monodelphis domestica (gray short-tailed opossum): 100021775
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Entry
100021775 CDS
T01031
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100021775 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdo03400
]
100021775 (LIG3)
Enzymes [BR:
mdo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
100021775 (LIG3)
DNA repair and recombination proteins [BR:
mdo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
100021775 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
RNA_ligase
BRCT_2
mRNA_cap_enzyme
DUF3802
Motif
Other DBs
NCBI-GeneID:
100021775
NCBI-ProteinID:
XP_007485596
Ensembl:
ENSMODG00000019147
UniProt:
A0A5F8H947
LinkDB
All DBs
Position
2:complement(499654501..499677002)
Genome browser
AA seq
1005 aa
AA seq
DB search
MTLSLTVLFQQACRVLGQRKVSHLLREPFHWQLSNWLFSVSGAGHCHGSWLLVKKRPSLW
FKGSSPRPSTARFTFLPVSHVGFCTGASEMAEQRYCVDYAKRGTAGCKKCKEKIVKGTCR
IGKVMPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELQDAEKDQIN
EHIAALSSKAASTPTKRATVQAKLTTTGQVISPHKGSSSVINTNPRKFSGYTAKPSTSKG
PVSYLTPKPTLSARKCDPKHKDCLLREFRKLCAMVADKPSYNVKTQIIHDFLQKGSGGDG
FHGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCSQDDMIRDLEQGDVSETVRVFF
EQSRSFPPATKSLLTIQEVDAFLLQLSKLTKEDDQQNVLQDIASRCTANDLKCIIRLIKH
DLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLANQQESEKVPGMKRTLNVQASLM
TPVQPMLAEACKSIDYAMKKCPNGMFSEIKYDGERVQVHKNGDQFSYFSRSLKPVLPHKV
AHFKDYIPQAFPGGHSMILDAEVLLIDTKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCI
YFNDVSLMDRPLCERRKFLHDNMVQIPNRILFSEMKHVTKASHLANMINRVIREGLEGLV
LKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGNKGGMMSIFLMGCYDP
SSKKWCTVTKCSGGHDDATLARLQNELDMVKISKDPSKIPSWLKINKNYYPDFIVPDPKK
APVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYHLSKEKADF
MVVATDEGSSVTSGSSGENEGTSASSTPQRASKASPSQASAQARKAEIKRNGSPGPADYK
PSGRPSPGKASEKQGEKRKAPEEDSSQKTLLDIFTGVRLYLPPSTQDFGRLRRYFVAFDG
DLVQEFDAASATHVMGGGGENPEALRVSPEWIWACIRKRRLVAPC
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgactttgtctttgactgtcctcttccagcaagcttgcagagttcttggccaaaggaaa
gtatcacatttgctccgagagccattccattggcagctaagtaactggctcttcagtgtg
tcaggagcaggtcactgtcatggctcctggctccttgtgaagaagaggccttctctctgg
ttcaaggggagcagcccaagaccatctactgctcgatttaccttcctgccagtgtcacat
gtggggttctgcacaggtgcttctgagatggctgaacaacggtattgtgtggactacgcc
aagcgtggtacagctggctgcaagaaatgcaaggagaagattgtgaagggtacgtgccga
ataggcaaagtgatgcccaaccccttctcagaatctgggggtgacatgaaggaatggtac
catatcaagtgcatgttcgagaagctggaaagggcccgggctaccaccaagaagattgaa
gacctgactgaacttgagggctgggaagagctccaggatgcagagaaggatcagatcaat
gagcacattgcagcactctcctcaaaggcagcaagcacaccaacaaagagagccacagtc
caggccaagctgacaaccactggccaggtgatttctccacacaaaggatcctcctcagtc
attaataccaatccccggaaattctctggttacacagctaagccaagcacctctaaggga
cctgtctcatacctcacccccaagcccactctgtcagctagaaagtgtgacccaaagcac
aaagactgcttgttgagggagtttcggaaactgtgtgccatggtggctgacaaacccagc
tacaatgtgaagacccagatcatccatgacttcctgcagaaaggatcaggcggtgatggt
ttccatggtgatgtgtacctgacagtgaagctactcctgccaggtgtcattaaaagtgtt
tacaacctgaatgacaaacagattgtgaagcttttcagtcggatttttaactgcagtcag
gatgacatgatccgggacttagagcagggagatgtgtcagagactgtgcgcgtgttcttc
gagcagagcaggtcctttcccccagcaaccaagagcctcctcaccatacaagaagtagat
gcattccttcttcagttgtccaaactcacaaaagaggatgaccagcaaaatgtgctacag
gacattgcctccaggtgtactgccaatgacctcaagtgtatcatcaggctcatcaagcat
gatctcaagatgaattcgggggctaagcatgtgctggatgccctggatcctaatgcttat
gaagctttcaaggcctcaaggaacctccaggacgtggtagagcgtgtcctagcaaaccag
caagaatcggagaaggtgccaggcatgaagcggacactcaacgtccaggcatctcttatg
acccctgtgcagcccatgctggctgaagcctgcaaatccattgactatgcaatgaagaag
tgtcctaatgggatgttctctgagatcaagtatgatggtgagcgggtacaggtacacaag
aatggggaccagttcagctactttagccgcagcctcaagccagtcctgcctcacaaagtg
gcccattttaaggactacatcccacaagctttcccaggtggccacagcatgatcctagat
gctgaggttcttctgatcgacaccaaaacaggcaaacctctgccctttgggactctgggt
gtgcataagaaagctgctttccaggatgccaacgtttgcttatttgtgtttgactgcatc
tacttcaatgatgtcagcctgatggacagaccattgtgtgaacgacggaagtttctccat
gataacatggttcagatccccaatcggatcctgttctctgaaatgaagcacgtaacaaaa
gcttcacatttagccaatatgatcaaccgtgtcatccgggaagggctagaaggactggtg
ctaaaagatgtgaagggaacctatgagccagggaagcggcactggctgaaagtgaagaag
gattacttgaatgagggggccatggcagacacagcagatctggtggtccttggggccttc
tatggacaaggaaataaaggtggcatgatgtctatcttcctaatgggatgctatgaccct
agcagcaagaagtggtgcacagttaccaagtgttctggaggccacgatgatgccacactt
gcccgcctgcagaacgaactggatatggtgaagatcagcaaggatcccagtaagattccc
agctggctgaaaatcaataagaactactaccccgacttcatcgttccggatccaaagaaa
gctcctgtttgggagatcacaggagctgaattctccaaagctgaggcccatacagccgat
ggcatctcaatccgtttcccccgctgtacacgaattcgtgatgataaagattggaaatca
gccaccaacctcccacagcttaaggagctgtaccatctttctaaggaaaaagctgacttc
atggtggtggctacagatgagggtagttctgtgactagtggcagcagtggagagaatgag
ggcacctcagcatcttctacccctcaaagagcctccaaagcttctcccagtcaggcctct
gcccaggccagaaaggcagaaataaagaggaatggctccccgggccctgcagactacaaa
ccatctgggagaccttcccctgggaaagcgagcgagaagcagggggagaaaaggaaggcc
cccgaggaagactccagccaaaagacgctgctggacatcttcacgggcgtgcggctctat
ctgccgccctccacgcaggacttcggcaggctccgccgctacttcgtggcgtttgacggg
gatctggtccaggagtttgacgcggcctcggctacgcacgtgatgggtggtggcggcgag
aaccccgaggccctgcgggtttcccccgaatggatctgggcgtgtatccgcaaaaggagg
ctggtggcgccatgctag
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