Monodelphis domestica (gray short-tailed opossum): 100022113
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Entry
100022113 CDS
T01031
Symbol
RAD23B
Name
(RefSeq) RAD23 homolog B, nucleotide excision repair protein
KO
K10839
UV excision repair protein RAD23
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03420
Nucleotide excision repair
mdo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100022113 (RAD23B)
09124 Replication and repair
03420 Nucleotide excision repair
100022113 (RAD23B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mdo03051
]
100022113 (RAD23B)
03400 DNA repair and recombination proteins [BR:
mdo03400
]
100022113 (RAD23B)
Proteasome [BR:
mdo03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
100022113 (RAD23B)
DNA repair and recombination proteins [BR:
mdo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
100022113 (RAD23B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
ubiquitin
XPC-binding
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
UBA_3
New_glue
Dsc3_N
Ubiquitin_2
UBA_2
DUF1421
UBA_9
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
100022113
NCBI-ProteinID:
XP_007499697
Ensembl:
ENSMODG00000014579
LinkDB
All DBs
Position
6:186199334..186286759
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AA seq
426 aa
AA seq
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MASGGGGDTMQITLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGK
ILNDDTALKEYKIDEKNFVVVMVTKPKAAATSAPSPATTQQSIPATTSTVSSSTAASVAQ
APTPSPALAPTPTPTSVTPTPAAAVCEPIPTSAPKEEKPAEKPVEAPIGVSPTSSDSTLG
DSSRSNLFEDATSALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGI
PGDRENQSVVDPPQAASTGAAQSSAVAAAAATTTATTTTTTTSGGHPLEFLRNQPQFQQM
RQIIQQNPSLLPALLQQIGRENPQLLQSSNAPQQISQHQEHFIQMLNEPVQESGGQGGGG
GGSGGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQ
QNFDED
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgggggcggcggcgacaccatgcagatcactctgaagaccctccagcaacag
accttcaagatcgacatcgaccctgaggagacggttaaggcactgaaagagaagattgaa
tctgaaaagggcaaggatgcctttccagtagcaggccaaaaattaatttatgcaggcaaa
atcctcaatgatgatactgctctcaaagaatacaaaattgatgagaagaactttgtggtg
gttatggtgacaaaacccaaagcagcagccacatcagcaccatcaccagctacaactcaa
caatcaattcctgctaccacttctactgttagttcatctacagcagcatctgtggctcaa
gccccaactccttcccctgccttggctcccacccccacacctacatctgtcactccaaca
ccagctgcagcagtatgtgaacctatacctactagtgctcctaaggaagagaaaccagca
gagaagccagtagaagctcctattggtgttagcccaacatcatctgacagtaccctgggt
gactcctctcggtcaaacctttttgaagatgcaacaagtgctcttgtgacgggccaatca
tatgaaaatatggtgactgagatcatgtcaatgggctatgagcgagagcaagtaattgca
gcactgagagccagtttcaacaaccctgatagagcagtggaatatcttttaatgggtatc
ccaggagatagagaaaatcagtctgtggtggatccccctcaggctgccagcacaggggct
gctcagtcttcagcagtggcagcagctgcagccacaacaacagcaacaactactactact
actacttctggaggacatccacttgaatttttacggaaccagcctcagttccagcagatg
agacaaattattcaacagaatccttcccttctgccagccttgttacagcaaataggacga
gaaaatccacagttattgcagtcctccaatgcaccacagcaaatcagccaacatcaagag
cattttattcagatgctgaatgaaccagttcaagaatctggtggtcaaggaggaggtggg
ggtggcagtggaggaatagctgaagctggaagtggtcacatgaactacattcaagtaaca
cctcaggaaaaagaagctatagaaaggttaaaggcattaggattccctgaaggacttgtg
atacaggcttattttgcttgtgagaagaatgaaaatttggctgccaattttcttctacag
cagaactttgatgaagattga
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