Monodelphis domestica (gray short-tailed opossum): 100022232
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Entry
100022232 CDS
T01031
Symbol
COL17A1
Name
(RefSeq) collagen type XVII alpha 1 chain
KO
K07603
collagen type XVII alpha
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04382
Cornified envelope formation
mdo04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100022232 (COL17A1)
09158 Development and regeneration
04382 Cornified envelope formation
100022232 (COL17A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
DUF2868
Motif
Other DBs
NCBI-GeneID:
100022232
NCBI-ProteinID:
XP_007479137
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Position
1:107824941..107889922
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AA seq
1513 aa
AA seq
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MDGTKKGRREGSEVTERVITETVTTRLTSLPPKGGTSNGYAKTSSLSGGSRLEKQSLTHG
SSGYINSSGSLRGNASTSSYRRAQSPASTLPNSPGSTFERKSHVTRHATYEGSSSGNSSP
EYPRKEFGSSSTRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASASPTRNS
SNTLPIPKKATVETKMVTESSQSVSGTYDTTIVDANLPSYMWSSTLPAGSSMGAYHNNMA
AQSSSLLNTNAYSTGSVFGVPNNMASCSPTLHPGLSTCSSVFGVQNNLAPSSSTLAHGTT
TTTTSTVYGVKKNVQAPTVVSTGVSTSAGTTSSHTDDLLRKDCKFLLLEKENVPAKKEME
LLIMTKDSGKVFTASTTGLSTTSFSEDTLKKDKQAMSSSYVSDSCLKSEANGGLKVASMK
DKATYAEIQGDDRGVGGAGGGGGGGGGGAGFGAAPAWCPCGSCCSWWKWLLGLLLAWLLL
LGLLFGLIALAEEVRKLRARVDDLEQINTSMLQDREKIYKDRAIAVSHVGGGTSELDSHS
QEALWLFVKNRLLIEQEKGNLRGNPGPKGDMGIQGPKGERGFIGVPGVPGTMGHPGPEGP
KGQKGSLGESGPEGPMGQRGREGPTGPRGEPGPPGFGEKGDRGAAGDPGPQGPPGVPGSV
GPKGSVGSPGPQGPSGPSGLQGFRGEAGSPGPKGEKGPMGPPGPKGDAGEKGPRGLTGEP
GSRGLPGPTGEPGAKGAVGPAGPDGHQGPRGEQGLTGMPGIRGPPGPAGEGGKPGLTGPQ
GPPGLPGTPGRQGVKGDTGTPGRIVTSEGTSTVTVPGPPGPPGAMGPPGPPGIPGPAGPA
GLPGQQGPRGERGIAGESIIGSSSSAGLNSAPHTAQLQGPPGPPGPPGPPGASITGPPGP
RGPAGEGLPGPPGPPGSFLTNSETFFSGPPGPPGPPGPKGDQGSPGPRGYQGDPGLPGLS
VSGSDTLGVTLRGPPGPPGDQGLPGPKGDKGDPGVPGAPGIPGSPSRGGSSSSRGPPGPP
GPPGPPGSISSSRREIQQYISDYMQSDSIRSHLSGVQGPPGPPGPPGPVTTIGGETFDYT
ELASRVMSYLRTSGYNVGSFSSISSEDILLVLQREEVRQYLRQYLMGPRGPPGPPGASGD
GSMLTLDYEELTNRILSYMRSSGISVGSPGPPGPPGLPGTSYQDLLSLLQGSEYSGIVGP
PGPPGPPGPSGSSWSSLSMEELSSYLQSAGFSSVSGPPGPPGPPGPRGPPGVSAALATYA
AENSDSFRSELISYLTSPDVRSFIVGPPGPPGPQGPPGDGRLREADGSYSRGSSNSYGSS
TSRSTSYSSSLGLGGANGGASLGGGGAYGATLGDGGPYGTDVGGGYGTAAGEGGMYGPEG
RAFGAGFAADLDYSELAVRVSETLHRQGLLQGMAYTVQGPPGQPGPQGPPGVSKVFATYS
NVTEDLMDFFRTYGTIPGPKGDTGFPGPRGERGPAGNPGRPGPPGPRGHKGDKGDKGEQV
YVGRRRRSIAAKP
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atggatggtaccaagaaaggcaggagagaaggctctgaagtcacagaaagagttatcact
gaaacagtaaccacaagacttacatccttgccaccaaaaggagggacaagtaatggatat
gccaaaacatcatctctcagtggagggagccggctggagaagcagagtttaacccatggc
agcagtggctacataaactccagtggaagtttaagaggaaatgcctccacctccagttat
aggagggcccagtctcctgcttctactctccccaattcaccaggctcaacctttgaaagg
aaaagtcatgtcacccgccatgcaacatatgaagggagctcaagtgggaattcttctcca
gaataccctcggaaggaatttggatcttcttccaccagaggacggagccagactcgagag
agtgaaattcgtgttcgtctacagagtgcttccccatctacccgatggacagaattagat
gatgtgaaacgtttgctcaaggggagcagatcagccagtgcaagtcctacccggaactct
tccaacacactccccatccccaagaaggctactgtggaaaccaagatggtgacagagagt
tctcagtcagtatcaggtacttacgacacaaccatcgtagatgctaacctcccctcctac
atgtggtcctctaccttgcctgctggttcatctatgggagcttatcacaacaacatggca
gcccagagctcatcccttctcaataccaatgcttactcaacgggatcggtgtttggtgtt
cccaacaatatggcttcctgctcacctaccctacaccctgggctcagcacctgctcctca
gtttttggcgtccaaaacaacttggctcccagctcttccaccctggctcatggcacaacc
accaccaccacatccacagtatatggtgtaaagaaaaacgtccaggcccccactgttgtc
agtacaggcgtgagcacctctgcaggcaccaccagttcccacactgatgatctgctgcgc
aaggactgtaagttcttgctgttggagaaggagaatgttccagccaagaaagagatggag
ctgttgatcatgaccaaggacagtgggaaggtcttcaccgcttccaccactgggctcagt
acaacttcattctcagaagacactctgaaaaaagacaagcaagcgatgtcttcctcctac
gtctctgactcctgtctcaaatctgaagctaacggaggtctgaaggttgcatccatgaag
gacaaagccacctatgcagaaatacaaggagatgaccgtggtgtcggtggtgcaggagga
ggaggaggtggaggtggcggcggtgcaggttttggggctgcccccgcctggtgtccctgt
ggctcctgctgtagttggtggaagtggcttttaggtctgctcctggcctggctgttgctt
cttggattgcttttcggactcattgctttggcggaggaggtgaggaagctgagagctcgt
gtggatgacctggagcaaatcaacactagtatgttacaggacagggagaagatctacaaa
gatcgagccattgctgtctcccatgttggtggagggaccagtgaacttgacagccacagt
caagaggctctctggttatttgtgaaaaacaggctgctgatagaacaggaaaagggaaat
ctacgaggaaatcctggaccaaaaggtgatatgggaattcaaggtccaaaaggagaaaga
gggtttattggagttccaggtgttccagggactatgggccatccaggcccagaaggacca
aagggacagaaaggcagtttgggagaatctggtccagagggacccatgggtcagagagga
cgagaaggccccacagggcctcgcggtgaaccgggcccccctggttttggagagaaggga
gacagaggtgctgctggagatccaggtcctcaaggcccccctggtgtccctggttctgtt
ggtcccaaaggttctgttggttccccaggaccccagggcccctcaggtccttctggcctc
caaggcttcagaggtgaagctggttcccctggtcccaaaggggagaaaggaccaatggga
cccccaggacccaaaggtgatgcgggtgagaaaggacctcgaggtcttacaggagaacct
ggatcaagaggtcttcctggtccaactggtgaacctggtgctaaaggagctgtgggtcca
gctggtccagatggacaccaaggcccaagaggtgaacaaggtcttacagggatgcctgga
atccgtggcccaccaggacctgcaggagaaggagggaaaccaggcctcacaggaccccaa
ggacctccaggacttcctgggactccaggcagacagggggttaaaggtgacactggaact
ccaggcaggattgtaacttcagagggaacatcaacagtgactgtaccaggacctccagga
ccaccaggagccatggggcccccaggaccaccaggcattccaggacctgccggcccagct
ggtcttccaggacaacaaggtccccgaggggagagaggcatcgcaggggaatcgattatt
ggaagcagctcttctgctgggctcaattctgctcctcacactgctcaattgcaaggcccc
cctggaccaccaggaccaccaggaccaccaggagcttccatcacaggccctccaggaccc
cgaggcccagcaggggaaggcctaccaggacctcctggaccacctggaagtttccttaca
aactcagaaacattcttctctggtccccctggcccacctggacctcctggccccaaagga
gatcaaggctctccgggaccccgaggataccaaggagaccctggcctcccaggactctct
gtttcaggttcggacacgctgggagtcaccctacgaggtccacctggcccacctggtgat
cagggacttccaggacccaaaggtgacaaaggtgatcctggtgtccctggtgctcctgga
atccctgggagcccctctcgaggaggctcatcaagttctcgaggacccccaggaccacct
ggccctcctggtcctcctggctccatcagcagctccagacgggagattcaacagtacatc
tctgattacatgcagagtgacagcatcagaagtcacctctctggagttcagggtccccct
ggccccccagggcctccaggacctgtcaccaccattggtggggaaactttcgactacact
gagctggcgagccgagtcatgagctacttacggacttctgggtacaatgtgggctccttt
tcctcgatttcttctgaagacatcctacttgttctgcaaagggaagaagtgcgccaatat
ctccggcaatatctgatgggtcctcgaggaccgcctgggccaccaggagccagcggggat
gggtccatgctgactctggactatgaagagttgaccaaccgcatcctaagctacatgaga
agttctgggatcagtgttggttcccctggtccccctggtcccccaggtctgccaggaaca
tcctaccaggacctgttgtctttgctccaagggtctgaatacagtggcatcgttgggcct
cctggaccccctggacctccagggccttcaggcagctcctggtctagcctcagtatggag
gaactttcatcttaccttcaaagtgcaggcttctcttcggtctcgggtcctcccggtccc
ccagggcctccaggcccccgcggcccccctggggtttcggcagctttggcaacctatgcg
gctgaaaacagcgacagtttccggagtgagctgattagctaccttacaagtcctgatgtc
cgaagcttcatcgtgggacctccgggccccccggggcctcagggtccgccgggagatggc
cggctacgggaagcggacggctcctacagccggggaagcagtaactcctacggctcttcg
accagccgcagtacttcctacagctcctcgctgggattgggaggagccaacggaggagcg
tccctgggtggagggggagcctacggcgcaactctgggagatggtggcccctacggcaca
gatgttggtggaggctacgggacggcagcgggagaagggggcatgtatggccctgagggc
agagctttcggtgcaggcttcgccgcggacctggattacagtgaactggctgttcgggtg
tcggagaccttgcaccgtcagggtctgctccaaggcatggcttacaccgtgcaaggcccg
ccaggccagcctgggccccagggtcctcctggtgtcagcaaggtattcgcaacctacagc
aacgtgaccgaggacctcatggacttcttccggacttatgggacaattccaggaccaaag
ggagacacaggctttccaggacccagaggtgaaaggggaccagctggaaatccgggtaga
cctggacctccaggccccagaggacacaaaggagacaaaggagacaaaggtgaacaagtc
tatgttggcaggaggaggagaagcattgctgcaaaaccataa
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integrated database retrieval system
