Monodelphis domestica (gray short-tailed opossum): 100022426
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Entry
100022426 CDS
T01031
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03082
ATP-dependent chromatin remodeling
mdo03250
Viral life cycle - HIV-1
mdo04714
Thermogenesis
mdo05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100022426 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100022426 (SMARCB1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100022426 (SMARCB1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100022426 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mdo01009
]
100022426 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdo03021
]
100022426 (SMARCB1)
03036 Chromosome and associated proteins [BR:
mdo03036
]
100022426 (SMARCB1)
Protein phosphatases and associated proteins [BR:
mdo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100022426 (SMARCB1)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100022426 (SMARCB1)
SWI/SNF complex
100022426 (SMARCB1)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100022426 (SMARCB1)
PBAF complex
100022426 (SMARCB1)
SWI/SNF complex
100022426 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
100022426
NCBI-ProteinID:
XP_007506077
LinkDB
All DBs
Position
Un
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AA seq
329 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHGKKSKPSAKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYL
REQKAKRNNQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA
SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA
IRQQIESYPTDSLLEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE
LGLGGEFVTTIAYSIRGQLSWHQKTYAFR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggccttgagcaagacgttcgggcagaagcccgtgaagttccagctggag
gaagacggcgaattctacatgattgggtccgaggtggggaactacttgcgcatgttccgg
gggtccctgtacaagaggtacccctccctgtggaggcgcctcgccaccgtggaggagagg
aagaaaattgtggcgtcgtcccatggtaaaaaatccaaacctagcgccaaggatcacggc
tacaccaccctggccaccagcgtgaccctgctgaaggcctccgaggtcgaggagatcctg
gacggcaacgacgagaagtacaaggccgtgtccatcagcacggagcctcccacctacctc
agggagcagaaggccaagaggaacaaccagtgggtccccaccttgcccaacagctcccac
catctggacgccgtgccctgctccaccaccattaacaggaaccgcatgggccgggacaag
aagcgcacgttcccgctctgctttgatgaccacgaccctgcagtgatccatgaaaatgca
tcccagcccgaggttctggttcctattagactggacatggagatcgacgggcagaaactc
agagatgctttcacatggaacatgaatgagaaactgatgaccccagaaatgttctcagaa
atcctctgtgatgacttggatctgaatcctctgacctttgtccctgccatcgcttcggcc
atccggcagcagatcgagtcctatccgacggacagcctcctggaggaccagtcagaccag
cgtgtcatcatcaagttgaacatccatgtgggcaacatctctctggtggaccagtttgag
tgggacatgtctgagaaggagaactctccagagaagttcgccttgaaactgtgctcagag
ctcggcctcggcggggaatttgtcaccaccatcgcttacagcattcggggccagctcagt
tggcatcagaagacttacgctttcaggtag
DBGET
integrated database retrieval system
