Monodelphis domestica (gray short-tailed opossum): 100022757
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Entry
100022757 CDS
T01031
Name
(RefSeq) transcription factor SOX-17-like
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100022757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100022757
Transcription factors [BR:
mdo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100022757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
100022757
NCBI-ProteinID:
XP_001368625
Ensembl:
ENSMODG00000025612
LinkDB
All DBs
Position
3:complement(186009130..186023441)
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AA seq
406 aa
AA seq
DB search
MSSPDAGYASDDQSQARCALPLMMAGMGPCPWVESLSPLGEMKIKSESGSGLGTGGSGTV
AVVGASGRGKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLAE
KRPFVEEAERLRVQHMQDYPNYKYRPRRRKQVKRLKRMESGFLHGLPEQLGSGLGPEGRV
CVDSPGLLFHEQAYHQGQGVLPPQMGHYRDCQNLGPAPLQFDSYNLPTPEASPMDGMEPD
AAFFTSSLQGDCQTVPYSYPVSSEYSVHAEPHSGPMHHRHMQEPMAHSLQGLMGASNPLH
MYYGPMGSPQAGGSVRGFQMQHQSGSSQPSPPPEALNCRDGLDGSQPTEVQEAGIHTEFE
QYLHHLCKAELGLVSSGHDGDHNPSTISSVMSDASSTVYYHNYQNI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgccgggtacgccagtgacgaccagagccaagccaggtgcgcgctg
cccttgatgatggccgggatgggcccctgcccttgggtagaatctctgagccccctaggg
gagatgaagatcaagagcgagtccgggtcgggcttagggacgggaggcagcgggaccgtt
gcagttgtgggcgcttctggccgcggtaaaggggagtcccgcatccggcggcccatgaac
gcgtttatggtttgggccaaggacgagcgcaagcgtctagcgcagcagaatcccgaccta
cacaatgccgagctgagcaagatgctggggaagtcctggaaggctttatctctggctgag
aagaggccctttgtggaggaggctgagcgactacgtgtccagcacatgcaggactacccc
aattacaaataccggcctcggaggaggaagcaggtgaagaggctgaaacgaatggagagc
ggcttcctccatggtctccccgagcagctagggtctggcctgggtccggagggcagagtg
tgtgtggacagcccgggactgctgttccatgagcaggcctaccaccaaggccagggagtg
ctccctcctcagatgggccactaccgggactgccagaacctgggtccagctccccttcag
tttgacagctacaacctgcctacccctgaggcttctcccatggatggcatggaaccagat
gcagctttcttcacctcttctctccaaggagactgccagacagtgccctacagctatcct
gtgtcctctgagtactctgtgcatgctgagcctcactcgggtcctatgcaccacagacac
atgcaggaacctatggcccattcgttgcagggtctgatgggcgcctccaaccctctgcat
atgtactatggtcccatgggctctccccaggctgggggcagtgtccgaggcttccagatg
cagcatcagtcaggatctagtcagccctctcctcctccagaggctttgaactgcagggat
ggcctggatggcagccagcccacagaggtccaagaagctgggatccacacagaatttgaa
cagtatcttcaccacctatgtaaagcagagttggggcttgtctcttcaggccatgatggt
gaccataacccttccactatctcctctgtcatgtcagatgccagttccacagtctattac
cataactaccaaaacatatga
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