Monodelphis domestica (gray short-tailed opossum): 100023010
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Entry
100023010 CDS
T01031
Symbol
COPA
Name
(RefSeq) coatomer protein complex subunit alpha
KO
K05236
coatomer subunit alpha
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100023010 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdo04147
]
100023010 (COPA)
Membrane trafficking [BR:
mdo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100023010 (COPA)
Exosome [BR:
mdo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100023010 (COPA)
Exosomal proteins of bladder cancer cells
100023010 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
100023010
NCBI-ProteinID:
XP_001369624
Ensembl:
ENSMODG00000009549
LinkDB
All DBs
Position
2:165363568..165408398
Genome browser
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNARLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEASEGFGDEVLAKGQEEGGGWDVEEDLDLPPELDVSPGAAG
GAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFL
QTYARGRTTYQALPCLPTMYSYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTAG
KFEEAVEKFRFILLSVPLLVVDNKQEITEAQQLIAICREYIVGLSMEIERKKLPKESLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVSQQ
TRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYCPEFQGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaaattcgagaccaagagcgcgcgagtcaaaggactcagctttcaccccaaa
cgaccctggatcttgactagtcttcacaatggagttatccagctgtgggattaccgaatg
tgtaccctaattgacaaatttgatgagcatgatggtcctgtacgaggcattgacttccac
aaacagcaaccactgtttgtctctggaggagatgattataagatcaaggtctggaattac
aaacttcggcgctgtctgttcacgttgcttggacacctagattatatccgtaccacattt
tttcatcatgaatatccttggattctgagtgcctcagatgatcagactatccgtgtgtgg
aactggcagtccaggacctgtgtctgtgtgctaacaggacacaaccactatgtgatgtgt
gctcagtttcacccttcagaagaccttgtggtatcagctagcctggaccagactgttcgt
gtttgggatatttctggtctgaggaagaagaacctttcccctggagctgtggagtcagat
gtgaggggaataacaggggttgatctctttgggacaacggatgcagtcgtaaaacatgtt
ttggagggccatgatcgtggagttaactgggctgccttccaccctactatgcctctcatt
gtatctggggcagatgaccgtcaagtaaagatttggcgtatgaatgaatctaaggcttgg
gaagtagatacttgccgaggtcactacaacaatgtctcctgtgctgtcttccaccctcga
caagaactcatccttagtaattctgaagataaaagtatccgggtgtgggatatgtcaaaa
cggactggagttcagaccttccgtagagaccatgaccgtttctgggtcctagctgcccat
cccaacctcaacctctttgctgcaggtcatgatggtggcatgattgtctttaaactggag
cgggagcgaccagcttatgctgttcatggaaacatgctacactatgtcaaagatcgattc
ttgcgccagttagattttaatagctctaaagacgtcgctgtcatgcagttgaggagtggt
tccaagtttccagtattcaatatgtcatataacccagcagagaatgcagtcctactatgt
acaagagctagcaacctagaaaatagcacctatgacttatataccattcctaaggatgct
gactctcagaatcctgatgcccctgaagggaaacgttcttctggtctgacagctgtatgg
gttgcccgaaatcggtttgctgttctagatcgtatgcattcgcttctgatcaagaacttg
aagaatgaaatcaccaagaaagtgcaggtccccaattgtgatgagatcttttatgcaggc
acagggaacctgctacttcgagatgctgattccattacactttttgatgtgcaacagaag
cgaactctggcatcagtgaaaatttccaaagtgaagtatgtcatttggtcagcagatatg
tcccatgtagccctgctagccaaacatgccatcatgatctgcaatcgtaaactagaatca
ctttgtaacatccatgagaatattcgagtcaagagtggagcctgggatgagagtggtgtg
tttatatataccaccagcaaccacatcaaatatgctgtcactactggggaccatgggata
atccgtacccttgacttgccaatctatgtcacccgggtgaaaggcaacaatgtgtactgc
cttgaccgggagtgtcgtccacgagtgcttaccattgatcccactgagtttaaatttaaa
ctagccttaatcaacaggaaatatgatgaggtactgcacatggtgaggaatgccaagttg
gtgggccagtccatcattgcctatcttcagaagaaggggtatcctgaagtggcgttgcac
tttgttaaggatgagaagactcgattcagtctggccctggaatgtggaaatattgagatt
gccctagaagcagccaaagccctagatgataagaattgctgggaaaagctaggagaagtg
gccctactccaaggaaaccatcagattgtggagatgtgctaccaacgtaccaagaacttt
gataagctttccttcctatatctcatcactggcaaccttgagaaacttcgcaagatgatg
aagattgctgagatcagaaaagacatgagcggccattaccagaatgctctgtacttgggt
gatgtttcagaacgtgtgcgcatcctaaagaattgtgggcagaaatctctggcctacctt
acagctgctactcatggtctggatgaggaagcagagagcctcaaggaaacatttgaccca
gagaaggagacaattccagacattgaccctaatgccaggctactccagccacctgcaccc
atcatgccattggacacaaactggcccttgttaactgtttccaaaggcttctttgagggt
tctattgccagcaagggaaaaggaggcgcactagctgctgatattgacattgatactgtt
ggcaccgaaggctggggagaagatgcagagctgcaactggatgaagatggctttgtggaa
gcatcagagggtttcggcgatgaagtgcttgctaaaggacaggaagaaggaggtggctgg
gatgtggaggaagacttggatctcccacctgaactagatgtttcccctggggcagccgga
ggcgctgaagatgggttctttgtcccccccaccaagggaacaagtcctacccagatctgg
tgcaataattcccagctgccagttgaccatatcctggcaggctcctttgagacagctatg
cggctccttcacgaccaggttggggtaacccaatttggtccctataaacagttatttctc
caaacatatgcccggggccggaccacataccaggctctgccatgcctacctacaatgtat
agttacccaaaccgaaattggaaggatgcagggctgaagaatggtgtgccagctgtgggg
ctgaagcttaatgacctgatccaacgcctgcaactatgctaccagctcactacagcgggc
aagtttgaggaggcagtggagaaattccgttttatcctgcttagtgttccactccttgta
gtggacaataagcaagaaataactgaggcccagcagctcattgccatctgtcgtgagtac
attgtgggtttgtccatggaaattgagaggaagaagttgcctaaggaaagcctagaacag
cagaagcgcatctgcgagatggcagcttacttcacccactccaatttgcagcccgtgcat
atgatcctggtacttcgaacagctcttaatctcttctttaaactcaagaacttcaagaca
gctgctacctttgcacggcgactgttagagctgggtcccaagcctgaggtgtcccagcag
actcgaaaaatcttgtctgcctgtgagaagaatccaacagatgcctaccagctcaattat
gacatgcacaacccttttgacatctgtgctgcatcctatcgacctatttaccgtggcaag
ccagtggagaagtgtccactcagtggagcttgttattgtcctgaatttcagggccagatc
tgccgtgtcaccacagtgacagaaattggcaaagatgtgattggtctaagaattagtcct
ctgcagttccgctga
DBGET
integrated database retrieval system
