Monodelphis domestica (gray short-tailed opossum): 100023144
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Entry
100023144 CDS
T01031
Symbol
RB1CC1
Name
(RefSeq) RB1 inducible coiled-coil 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04140
Autophagy - animal
mdo04211
Longevity regulating pathway
mdo05010
Alzheimer disease
mdo05014
Amyotrophic lateral sclerosis
mdo05016
Huntington disease
mdo05017
Spinocerebellar ataxia
mdo05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100023144 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
100023144 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100023144 (RB1CC1)
05014 Amyotrophic lateral sclerosis
100023144 (RB1CC1)
05016 Huntington disease
100023144 (RB1CC1)
05017 Spinocerebellar ataxia
100023144 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
100023144 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mdo01009
]
100023144 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100023144 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
mdo03029
]
100023144 (RB1CC1)
Protein phosphatases and associated proteins [BR:
mdo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100023144 (RB1CC1)
Membrane trafficking [BR:
mdo04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100023144 (RB1CC1)
Mitochondrial biogenesis [BR:
mdo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100023144 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
100023144
NCBI-ProteinID:
XP_007487289
Ensembl:
ENSMODG00000009612
LinkDB
All DBs
Position
3:188053603..188132405
Genome browser
AA seq
1580 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQNKYKIAIHQQVLVVNGGECMASDRRVC
TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSAENDMELKVEESLMMPAVFHTVASRTQ
LAVEMHEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTFSYQKLLFTFESAYSNYLQ
SIEDIKLKLTQYLLECLTRHSYRECLGRLISSPEHEGKEAESNVTEKSSELVLYPDMPPT
NKSLLASCCKSVEHSALDNTDPENGKEIRESCQSTIQEEEISVEPKESDLPSFNVSLLDW
INVQDRPNDVESLVRKCFDSMNRLDPRFIQPFLADCQQTVAKLDNQNMKAIKGLEDRLYA
LDQMIASCGRLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQLMIMLNNHRKLL
DIKQKCTTAKQELANNLQVRLKWCCFVMLHADKEGEKLQALLRLVTELLERVKIVEALST
VPQMYCLAVVEVVRRKMFIKHYREWAGALINDGKHLYEAEKSKRESFGKLFRKSFLRNRL
FRGLDSWPPSFCTRKPRKFDGELPDISLTDLKFLQSFCPSEVQPLLRVPLLCDFEPLHQH
VLALHNLVKAAQSLDEMSQTITDLLSEQKASMSQTSPQSATTPRMESTTGITTTTSPRTP
PPLTIQDPLCPPVCPLEELSPDSIDAHTFDFETIPHPNIEQNLHQESLDLDSLAESPESD
FMSAVNEFVIEENLTSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNICSKDDSGDH
ASLNVQIEKCRAVAQESQFNLQNIKEDLCHFRTLVQKEQCDFSNSLKCTAVEIRNIIEKV
KYSLEITLKEKHQKEQQSLKNEYEAKLNALIKDSEENEKKINKLKGDLVGLEEVLQNKDN
EFALVKNEKEAVLCLQNEKDQKLIELEHAMKNQNFEIKELKQSREVVLEDLKKLHVENEE
KLHLLRAELQSLEQSHLKELEDTLQDRHSQEFEKVLSDHKVSLDNLKKENQQKLDQIQES
HIIVVQEKEQQLQELKFKLSDLSDLRCKLEVELALKEAETDEMKILLEESKAQQQETLKI
LIEKETENLRSEISMLNQKIIDNNENYQIGLAELKTLMTIEKDQCISELVSRHEEESNLL
RAELNKVTSLHQQAFEIETKLREQIVELQSKLELELSALEKQSNERLVQQEEKYEAIIHK
LEEDKEKIVMNQGQDREQLVQKLNCEKEEAVQVALKEFELQREAVEKELLEKIKHLESQI
TKSPPIEHTSEDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTN
FNTVLTREKMKKENIINDLSDKLKNTMQQQERDKDLIESLSEDRARLLEEKKKLEEEVNK
LRSSSFVPPPYLATAPELCGACAPELPGETDRLASEIADEGRTDSAMETSMMSVHENIHM
LSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIIL
DERHDNYVLFTVSPTLYFLHSESLAALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRF
KVPLGTKFYRVKAVPWNKKV
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttttggtcaacactggaactaccctaacatttgacactgaactt
acagttcaaactgtggcagaccttaagcatgcaatccaaaacaaatataagattgcaatt
caccagcaggtactggtagttaatggaggagaatgtatggcctcagatcgaagagtatgc
acttacagtgctgggacagacacaaatccaatttttctgtttaacaaagaaatgatttta
tgtgatcgtccgcctgctattcccaaaacaacattttcagcagaaaatgatatggaatta
aaagttgaagaatctcttatgatgcctgcagttttccatacagtagcttcaaggacacag
cttgctgtggaaatgcatgaggttgccaagaaactctgttccttttgtgaaggtctagtc
catgatgaacatttacaacatcaaggctgggctgcaataatggccaatttagaggattgt
acattttcctaccaaaaactgcttttcacgtttgaaagtgcttattcaaattatctacag
tccatagaagatatcaagctgaaacttacacagtatcttttggagtgcctcacaagacat
agctacagagaatgtttgggaagactgatttcttctcctgaacatgaaggaaaagaagca
gagagtaatgtgactgaaaaatcatcagaattggtgctttatcctgatatgcctccgact
aacaaatcattgttagcctcatgttgcaagtcagtggaacattcagccctggacaacaca
gatcctgaaaatggcaaagaaattagggaatcttgtcagagcactatccaggaggaagaa
atttcagtagaacctaaagaaagtgacttgccttctttcaacgtttctttattagactgg
ataaatgttcaagatagacctaatgatgtggaatctttggtcagaaagtgctttgattct
atgaataggcttgatccaaggttcattcagccctttttggcagattgtcaacaaactgtt
gccaaactggataatcagaacatgaaagccattaaaggacttgaagacaggctttatgca
ctggaccagatgatagctagctgcggccgactggtaaatgaacaaaaagaacttgctcag
ggatttttagctaatcagaagagagctgaaaatttgaaagatacttctgtgcttcctgat
ttgtgcctgagtcatgcaaatcagttgatgattatgttgaataatcatagaaaactgttg
gacattaaacagaaatgtaccactgccaaacaagaacttgcaaataatctacaagtcaga
ttgaagtggtgttgctttgttatgcttcatgctgacaaagaaggagaaaaactacaagct
ttactccgccttgtaacagagctgctagaacgagtcaagattgtagaagctcttagtaca
gtaccacagatgtactgcttagctgttgttgaagttgtaagaagaaaaatgttcataaaa
cactacagggagtgggctggtgctttaatcaatgatggaaaacatttatatgaagctgaa
aagtcaaaaagggaatcttttggaaaattgtttaggaaatcttttttaagaaatcgtctg
tttaggggtcttgactcctggcctccttccttttgtactcgaaagcctcggaaatttgat
ggtgaacttccagatatttccttaactgatttgaagtttctgcagtctttctgtccttca
gaagtacaaccattactcagggttccattactttgtgactttgaacctctacaccagcat
gtacttgcactacataatttagtgaaagcagcacaaagtttggatgaaatgtcacagacc
attacagacctactgagtgaacaaaaggcttccatgagtcaaacatccccccaatctgct
actacaccaaggatggaaagtacaacaggaattacaactactacctcacctagaactcct
cctccactcactattcaggatcctttgtgtcctccagtgtgtccattagaagaattgtct
ccagatagcattgatgctcatacatttgattttgaaacaattcctcacccaaatatagaa
caaaaccttcaccaagaatctttagatttagactccttagctgaaagccctgaatctgat
tttatgtcagcagtgaatgaatttgtaatagaagaaaatctaacatctcctaatcctata
agtgatccacaaagtccagaaatgatggtggaatcactgtattcttcagttattaatgca
attgacagcagacgcatgcaggatacaaatatctgtagtaaagatgattcaggagaccat
gcttctctaaatgttcaaatagaaaaatgcagagctgttgcccaggaatcacagttcaat
ttacaaaacattaaagaagatctctgtcacttcagaactcttgtgcaaaaagaacagtgt
gatttctctaattctttaaaatgtacagctgtagaaatccgaaatatcattgaaaaagta
aaatattccctggaaataacactaaaagaaaaacatcagaaagaacagcagtcattaaaa
aatgagtatgaagctaaactcaatgcattaataaaagatagtgaagaaaatgaaaaaaag
attaataaattaaaaggagatttagtaggtcttgaagaggttttacaaaataaagataat
gagtttgctttggttaaaaatgaaaaagaagctgtcctctgcctacaaaatgaaaaagat
caaaagctgatagagttagagcatgctatgaagaaccaaaattttgaaattaaagaactg
aagcagtcacgagaagttgtgttggaagatttgaaaaagcttcatgttgagaatgaagaa
aaattacatcttcttagggcagagcttcaaagtttggagcagagtcacctgaaggaacta
gaagatactcttcaagacaggcattctcaggaatttgaaaaagttttgagtgaccacaag
gtttctttagataatttaaaaaaggaaaatcaacaaaaactcgatcagatacaagaatcc
catataatagttgtccaagaaaaagaacagcagttacaggagttaaaatttaaactttct
gatttgtctgacctgaggtgcaagttagaggttgaacttgctttgaaagaagcagaaact
gatgaaatgaaaatattgttagaagaaagcaaagcccaacagcaagaaaccttaaagatt
ctcattgaaaaagaaacagaaaacttgagatcagagataagcatgttaaatcagaagatt
atagataataatgagaactaccaaataggcttagcagagctgaaaacgctaatgaccatt
gaaaaagatcagtgcatttcagagttggtcagtagacatgaagaagaatcaaatttattg
agagctgaactaaacaaggtaacatctttacatcaacaagcttttgaaattgaaactaaa
ttgagagaacaaatagtggaattgcagagtaagttggagttggaattgagtgctcttgaa
aaacaaagtaatgaaagattggtccaacaagaagaaaaatatgaagctattatccacaag
cttgaagaagacaaagaaaaaatagttatgaatcaaggacaagacagggaacaacttgtt
cagaagcttaattgtgaaaaagaagaagctgttcaagttgcccttaaagaatttgagtta
cagagagaagctgttgaaaaagaactgttggaaaaaattaaacatcttgaaagtcaaata
accaaaagtcctcccattgagcataccagtgaagattcatcaagtttagttgctgaactt
caggaaaaacttcaggaagagaaggccaagtttttagaacaacttgaagaacaagaaaaa
agaaagaatgaagaaatgcaaaatgttcgaacatccttgattgcagagcaacagactaat
tttaacactgttctaacaagagaaaaaatgaagaaagaaaatataataaatgatcttagt
gacaaattgaaaaatacaatgcaacaacaggaacgagataaagatttaattgaatcactt
tctgaagatcgagcacgtttacttgaggaaaagaaaaaacttgaagaagaagtaaataaa
ttgcgcagtagcagttttgttcctccaccatatttagctacagctcctgaactttgtggt
gcttgtgcacctgaactccctggtgaaacagacagattagcttcagaaatagcagatgaa
ggaagaacagattcagcaatggaaacaagcatgatgtctgtacatgaaaatattcacatg
ttgtccgaagagaaacaaaggataatgttgttagaaagaactttgcagttaaaagaagaa
gaaaacaagcggttaaatcagagactaatgtctcaaagcatgtcctcagtttcttcaagg
cattcagaaaaaatagctattagagattttcaggttggagacttggttctcattatcttg
gatgaacgtcatgacaattatgtattatttactgttagcccaactttatatttcctgcat
tcagagtctcttgctgcattggacctcaaaccagcttcaggtacatctagaagaccctgg
gtacttggaaaagtaatggaaaaggaatattgtcaagccaaaaaggcacaaaacagattt
aaagttcctctgggtaccaaattttaccgagttaaagctgtgccgtggaacaagaaagta
taa
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integrated database retrieval system
