Monodelphis domestica (gray short-tailed opossum): 100023289
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Entry
100023289 CDS
T01031
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100023289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdo03009
]
100023289
Ribosome biogenesis [BR:
mdo03009
]
Eukaryotic type
Pre-60S particles
RNases
100023289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
100023289
NCBI-ProteinID:
XP_007498154
Ensembl:
ENSMODG00000004305
LinkDB
All DBs
Position
6:complement(43987892..44028806)
Genome browser
AA seq
985 aa
AA seq
DB search
MEKLESPDKEIESVKAKIEENQKKVSKYAFKCQSTVASFLWNDSHYGKNSPENDGLPKEY
DKEEVRSNNYQSESRKYVKDHRSPAADLENDPFLDYSAGLVNTAKGKQDKIEKKLFLNST
KPGLENWKEYPKKQRSFLAPIKLEINLESDDDDLIIDEAPLVPVSRKSRIIKRYKICNMD
DNIHIPPPEEGNLINSDTGLTSLIREERELQEETNNMNPEQFEKPHKTATVIQNAGLQCI
NQGSKIENLINQDKINAFISKENTEKQVPIEMYKADYPKDENVLKRTYNGHKKPVECHHS
LKVPQISYSESFSKGKIMSMKDTHKKPDEDKVEYIQRKVSYKKMENASFAISYISKPSYL
VDLVSGKTDTLNSYDHLSNYDKNGKINCNLEESEVIVITSSESSDSDDPVEECLQVFNEF
TESTTQKEENNKQFLGKHMESSTMDLKTVLTPGPKKRIAHTAKLNVPATKRIINPFQGRN
LQVQQQAMQITTTTKRGKAFVAATSKQKKHPVAYGSSQHPSTGSHNWSEPSPAVADSTHF
NEFLSEETFLTIPSRPTLPAKNIVPLSAKPTKNKAFKRKRKPMTWEYTAKVPNEMRERYV
SFFIEEYLKICKTTDEAFHKALIEEKAIYKRSSIKNIYLNIAVNALKKLRDQVDKMASNK
IPSDLSCPESLTEYRKQEEKKALTGVILYRHLKKYLLTEDQLNENNYPQPNPEKPGCAVL
KNGITKSVMMDGLRKICCRCGKIYHVTPEGKYTSLEECNYHFGTVVRHKVPGGSETQYSC
CEGIIGSPGCQTAKLHVHNDHKENLEGFVKTSVKLPPPDGNPGVFAVDCEVCYTSKGLEL
VRVTVVDPSLQVVYDTLVKPENEIIDYNIRFSGVAEDDLKNTNVSLQDVQAILLNLFSAD
TILIGHSFEKDLLALKLIHNTVIDTSILFPHRLGLPHRRALKNLIADYLRRIIQNNVGGH
SPSEDAIACMELILWKVKDDVKGKK
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggagaaattggaaagcccagacaaagaaattgagtcagttaaggctaaaattgaagag
aatcagaagaaggtttcaaagtatgcttttaaatgtcaaagtactgttgcttctttcttg
tggaatgactctcactatggaaaaaatagtcctgaaaatgatggactcccaaaagagtat
gataaagaagaagtaagaagcaacaactatcaatcagagtccagaaaatatgtcaaagac
cacagaagtccagcagctgatcttgaaaatgatcctttcctcgattattctgcaggtttg
gttaatacagctaaaggaaagcaggataaaatagagaaaaagctatttttgaattctaca
aagcctggacttgaaaattggaaggagtaccccaagaaacaaagaagctttcttgctcct
ataaaacttgaaataaatctagagtctgatgatgatgatcttataattgatgaagcacca
cttgttcctgtttccaggaaatctagaataattaaaaggtacaaaatttgcaatatggat
gataacattcatattcctccaccagaggagggaaatcttataaatagtgatacaggctta
acttctttgatcagagaggaaagagaattacaggaagaaacaaacaacatgaacccagaa
caatttgaaaagccccataaaactgcaacagtaattcaaaatgcaggtttacaatgtatt
aaccaaggttccaaaattgaaaatcttatcaatcaagacaaaataaatgcatttatttca
aaagaaaatacagagaaacaagtcccgattgaaatgtacaaagctgactacccaaaggat
gaaaatgttttgaaaagaacctataatggtcataagaaaccagtggagtgccaccattca
ctaaaggtaccccaaatatcttactcagaaagtttttcaaagggcaaaattatgtctatg
aaagacacacacaagaaaccagatgaagataaagttgaatatatacaaagaaaagtaagc
tataaaaaaatggaaaatgcatcttttgccatatcttatatttccaaaccatcatattta
gttgatttggtttctggaaagacagataccctgaattcttatgaccatctaagtaattat
gataaaaatggaaaaatcaactgtaaccttgaagagagcgaagtaattgtgataacttct
tcagaatcttctgattcagatgacccagtggaggaatgtcttcaagttttcaatgaattt
actgaaagcacaacacagaaggaagagaataataaacagtttttaggaaaacacatggaa
tcaagtacaatggatttgaaaactgttctaactcctgggccaaagaagagaattgcacat
actgcaaaactcaatgtaccggccaccaaaagaatcatcaatccattccaaggaagaaat
cttcaggtacagcaacaagcaatgcagataacaaccactaccaaaagagggaaagcattt
gttgctgctacatctaaacagaagaaacatcctgttgcatatggatcttctcagcaccca
agtacaggttctcataactggtcagaaccttcaccagctgtggcagatagtactcatttt
aatgagttcctttcagaagaaacctttttaacaataccatctagaccaactcttcctgca
aaaaatattgttcctttgtctgctaagccaacaaaaaataaggcatttaagcgcaaaagg
aaaccaatgacatgggaatatacagccaaagtgcctaatgaaatgagagaacgctatgtg
agcttctttattgaagagtatttgaaaatttgtaaaactacagatgaggcttttcataag
gccctgatagaagaaaaggccatttataaacgctctagcatcaaaaacatatatttgaac
atagcagtaaatgctttaaagaaactaagagatcaagttgataaaatggcgtctaataaa
attccttcagatttgtcttgtcctgaaagtctgacagaatatagaaaacaagaagaaaaa
aaagctcttacaggggtgattctctacagacatcttaaaaagtatcttctgactgaggat
caattaaatgaaaacaactatccccaaccaaatcctgagaagcctggctgtgctgtatta
aagaatggaataacaaaaagtgttatgatggatggtttgaggaagatttgttgtcgatgt
gggaaaatataccatgtaactcctgaaggcaaatacacaagtttagaagaatgcaactac
cattttggcacagtggtaagacacaaagtgcctggtgggtcggaaacacaatacagctgt
tgtgaaggaataattggatcacctggatgtcagactgctaagctccatgttcacaatgac
cataaagaaaacctagagggttttgtgaaaacttctgtcaaactaccacctcctgatggt
aatcctggggtgtttgcagtggattgtgaggtgtgctataccagcaaagggttggaactt
gttcgagtgacagtggttgaccccagtcttcaggttgtctatgatactttggtcaaacca
gaaaatgaaataattgactataacattaggttttctggagtagcagaagacgacttaaag
aacactaatgtatcacttcaggatgtacaagcaatattgttaaacctgtttagtgctgat
accattttaattggacatagttttgagaaggacttgcttgctctcaagctaattcataac
actgtcatagacacatcaatcctgtttcctcatcgactaggattacctcacaggagagcc
cttaagaacctaatagctgattacctcagacgaatcattcaaaataatgttggaggccac
agccctagtgaagatgcaattgcttgcatggagttgatcctctggaaagttaaagatgat
gtaaaaggaaagaaatga
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