Monodelphis domestica (gray short-tailed opossum): 100023705
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Entry
100023705 CDS
T01031
Symbol
COL4A1
Name
(RefSeq) collagen type IV alpha 1 chain
KO
K06237
collagen type IV alpha
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04151
PI3K-Akt signaling pathway
mdo04382
Cornified envelope formation
mdo04510
Focal adhesion
mdo04512
ECM-receptor interaction
mdo04518
Integrin signaling
mdo04820
Cytoskeleton in muscle cells
mdo04926
Relaxin signaling pathway
mdo04933
AGE-RAGE signaling pathway in diabetic complications
mdo04974
Protein digestion and absorption
mdo05146
Amoebiasis
mdo05165
Human papillomavirus infection
mdo05200
Pathways in cancer
mdo05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100023705 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100023705 (COL4A1)
04518 Integrin signaling
100023705 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100023705 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100023705 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100023705 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
100023705 (COL4A1)
09158 Development and regeneration
04382 Cornified envelope formation
100023705 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100023705 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
100023705 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100023705 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
100023705 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100023705 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdo04147
]
100023705 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
mdo00536
]
100023705 (COL4A1)
Exosome [BR:
mdo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100023705 (COL4A1)
Glycosaminoglycan binding proteins [BR:
mdo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100023705 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100023705
NCBI-ProteinID:
XP_007501357
Ensembl:
ENSMODG00000004766
LinkDB
All DBs
Position
7:82530192..82622016
Genome browser
AA seq
1670 aa
AA seq
DB search
MYNILNRNNFRTAALPSTFCIFKDIGEKTFEGKLVPISILHITDLHFLIFQGERGFPGLQ
GVIGFPGMQGPEGPHGPPGNKGDAGEPGLPGTKGTRGPPGSSGYPGNPGLPGIPGQDGPP
GPPGIPGCNGTKGDRGPAGSPGLPGFSGIAGPPGLPGMKGDPGEILNLIPGMPLKGERGF
PGPPGPMGPRGNPGLPGMDGPPGYSGPPGPPGPPGLPGEKGQMGLSFQGPKGDKGEQGVS
GPPGEPGQAQVGKKGDFITQGQKGQKGEPGAPGLPGEREKGEPGKPGPRGKPGKDGEKGE
RGSPGFPGEAGFPGIPGRDGPKGDKGQTGPPGPPGSVISTQPGGEKGEKGYPGAPGLQGE
PGQKGVPGPPGPPGYPVPGQIGAPGFPGERGEKGDPGPPGQSLPGPSGRDGVPGLPGPPG
APGLPGHTNGIVECQPGPRGDQGPPGSPGRPGLAGEMGEKGDKGQKCLTCDVEPGRPGLP
GPRGPQGEIGFPGQPGAKGDRGLPGHNGLAGMTGPPGLPGQRGVPGAKGEPGEIFFDAKL
KGDKGEPGFPGQPGIPGRAGTPGRDGHPGLQGPKGSPGSVGPKGERGPPGGVGFPGSPGD
IGFPGPPGFGLPGPVGDKGQSGFPGNPGPPGVPGAKGEAGKVVPLPGPPGAAGLPGPPGF
PGPQGDRGFPGSPGRQGPPGEKGAVGQPGIGFPGPPGPKGVDGLPGAIGQPGNPGRPGFD
GLPGNPGIPGQKGEPGVGLPGPKGSSGLPGIPGLPGEKGNVGGPGIPGEHGLIGPPGLQG
LRGDPGAQGIQGPKGAPGVPGIGPPGVMGPPGGQGPPGLAGPPGIKGEKGYPGFPGSDMP
GPKGDKGSTGLPGLTGQAGLPGPPGAQGNPGYPGSSGPKGEMGVMGTPGQPGPPGPAGSP
GFQGVKGDQGFPGTTGPRGDPGFKGDKGDAGLPGKPGSMDSVDRDSMKGQKGDPGEKGQA
GPTGDKGARGDPGTPGVPGKDGQAGTPGQPGPKGDQGLGGSPGAPGQPGPKGSVGGMGMP
GSPGEKGAPGIPGSQGIPGVPGLKGEKGAKGEAGRPGIGTPGLPGEKGDPGPSGFPGIPG
EKGEKGSPGMPGMPGPPGPGGLPGNVGYPGSPGIPGEKGDKGLPGLDGVPGVKGDAGQPG
HPGPAGPAGQKGEPGGDGIPGSSGEKGEPGPPGIGRQGLPGSKGDKGSKGELGFPGSAGS
PGIPGSKGEPGFMGPPGPPGHPGSPGVPGRAVEGPKGDRGPQGQPGTPGVPGPMGPPGLP
GLDGAKGEKGNPGWPGSPGAQGAKGDPGFQGMPGIGGTPGITGSKGDMGPPGVPGFQGAK
GFPGIQGLKGDQGDQGLPGSKGLQGPPGPPGPYSIIKGDPGIPGPEGPAGLKGLPGPPGP
KGQQGVTGSVGTPGPPGIPGFDGAPGQKGEQGPFGPPGPRGLTGPPGPEGLPGSMGPPGT
PSVDHGFLVTRHSQTTDDPPCPPGTKIIYNGYSLLYVQGNERAHGQDLGTAGSCLRKFST
MPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPISGDNIRPFISRCAVCEAPAMVMA
VHSQTIQIPQCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGR
GTCNYYANAYSFWLATIERNEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatatattaaacagaaacaacttcagaacagcagcactgccttcaactttctgc
atttttaaggatattggagaaaaaacatttgagggaaaacttgttccaataagcattttg
catatcacagacttgcattttttaatttttcagggtgaacgaggttttccaggattacaa
ggtgtcattgggtttcctggaatgcagggtcctgaaggtccacatgggcctcctggaaat
aagggagatgctggagaaccaggactaccaggaactaaaggaacaagagggccaccaggc
tcgtctggctaccctggaaacccaggacttcctggtatcccaggccaagatggtccacct
ggtcctcctggtatcccaggatgcaatggaacaaagggggatagaggtccagcaggttct
cctggcttgcctggattttctggaatagcaggtccccccggattgccaggaatgaaggga
gacccaggtgaaattcttaatctaattcctggcatgccattgaaaggtgaaagaggattt
cctggaccccctggaccaatgggtccaagaggaaatccaggattaccaggcatggatggt
ccaccaggctactcaggaccacctggtccaccaggccctccaggacttccaggtgaaaag
ggtcaaatgggtttgagttttcaaggacccaaaggtgacaagggtgagcaaggagtcagt
ggacctccaggtgaaccagggcaagctcaagtaggaaaaaagggagattttattactcaa
ggacaaaaaggtcaaaaaggagaacctggagctcctgggttgccaggtgaaagagagaaa
ggtgaacctggtaaacctgggcctcgagggaaaccgggaaaagatggtgaaaaaggagaa
agggggagccctgggtttccaggtgaagcaggattcccaggaataccaggtcgagatggt
cctaagggagacaaaggacaaactggccctccaggtccaccaggctctgttataagcaca
caaccaggaggcgaaaagggagagaagggatatccaggtgctccaggattacaaggtgaa
ccaggtcaaaaaggtgtcccaggtccaccaggtcctccaggctacccagtcccagggcaa
attggtgctcctggatttccgggagaaagaggagaaaaaggtgacccgggtcctccagga
caatcattgcctggaccaagtggaagagatggggttccaggacttcctgggcctcctgga
gctcctggtttaccaggccatacaaatggaattgtggaatgccagcctggaccacgtgga
gatcaaggtccaccaggaagtcctgggcgaccaggattggcaggggagatgggagagaaa
ggtgacaaaggtcaaaaatgcctaacgtgtgatgtagaaccaggacgacctggacttcca
ggtcctcgaggaccacaaggagaaataggttttccaggacagccaggtgccaagggagac
agaggtttacctggacataatggtcttgcagggatgactgggcctccaggtttgccagga
cagagaggtgttccaggagcaaagggagagcctggagagatattttttgatgcaaaactc
aaaggtgataagggagaaccaggttttccaggacaaccaggtatccccggaagggcagga
acacctggaagagatggccatcctggtcttcagggtcctaaaggctcaccgggttcagta
ggaccaaaaggagaacgaggtccccctggaggagttgggtttcctgggagtcctggtgat
ataggctttcctggcccaccaggatttggcctacctggcccagttggtgacaaaggacaa
tcaggttttccaggaaaccctgggccaccaggtgtcccaggtgctaagggtgaagcagga
aaagtggttcctctacctggtcccccaggagcagcaggacttccaggacccccaggtttc
ccaggtccccaaggtgacagaggttttcctggcagtccgggtagacaaggacctccagga
gaaaaaggtgctgttggccaaccaggaataggatttccaggacccccaggaccaaaaggt
gttgatggcttgccgggagctataggtcagccaggaaatccaggtcgtccaggatttgat
ggtttaccaggaaatcctggtataccaggccagaagggtgagcctggagtgggtctacca
ggtcccaaaggatcatcaggtcttcctggcattccaggccttcctggtgaaaagggtaat
gttggtggaccaggcatcccaggagaacatggacttattgggccacctgggctacaagga
ctcagaggtgacccaggggcacaaggaatccaaggcccaaaaggtgctcctggtgttccg
ggaataggccctcctggagttatgggaccacctggaggacaagggccaccaggattagca
ggtcctcctggaatcaaaggagagaagggttaccctggatttccgggatcagatatgcca
gggcccaaaggagataagggaagtactggtcttcctggcttaacaggccaagcagggtta
cctgggcctcctggggcacaaggaaatcctggatatccaggttcatcaggtcccaaagga
gagatgggagtaatgggaacccctggtcagccaggtcctcctggaccagcaggttctcca
ggattccagggagtaaaaggtgaccaaggtttcccaggtacaacaggacctaggggtgat
ccaggtttcaaaggtgataaaggtgatgctggtctcccgggaaagccaggatctatggat
tcagtggacagggacagtatgaagggccagaaaggagatccaggagaaaaaggacaagct
gggccaactggagataaaggggcgagaggagatcctggtactccaggagtacccgggaag
gatggacaagcaggaactcctggccagccaggtcctaaaggtgaccaaggtcttggggga
tctccaggtgctccaggacaaccaggaccaaagggttctgttggtggaatgggcatgcca
gggtcacctggagaaaaaggagcaccaggaatcccaggctctcaaggtatccctggtgtc
cctggattaaaaggagagaaaggagcaaaaggagaagcaggtcgcccaggcattgggact
cctggacttcctggtgaaaagggagatcctggaccttcaggtttcccaggaatacctgga
gagaagggagaaaaaggaagcccagggatgccaggaatgcccggtcccccaggtcctgga
ggactacctgggaatgtaggctatccagggagtcctggaatacctggtgagaaaggtgac
aaaggacttcctggtttggatggtgtccctggagttaaaggagatgcaggtcaacctggc
catccaggtccagcaggtccagctggccaaaaaggtgaaccaggtggcgatggaattccg
ggatcatctggggagaaaggtgaaccaggtcctccaggaataggacgtcaaggacttcca
ggttccaaaggagataaaggttccaagggcgagttgggtttcccaggatcagcagggagc
ccaggaattcctggatccaaaggagaacctggatttatgggtcccccaggtcccccaggg
catccgggatcacctggagtacctggtcgtgctgtggagggtcctaaaggagataggggt
ccacaaggtcaacctggcacacctggtgttcctggaccaatgggccctccaggtctccca
ggacttgatggagcaaaaggagaaaaaggaaatccaggttggccaggatccccaggtgct
caaggagccaaaggagaccccggatttcagggaatgcctggtattggtggtacaccagga
atcactggttctaagggtgatatgggacctccaggtgttccaggatttcaaggtgccaag
ggttttcctggaatccagggactcaagggagatcaaggagatcaggggctccctggttca
aaaggtcttcaaggaccacctggtcccccaggtccttacagcataatcaaaggagatcca
ggtattcctggcccagaggggccagcagggcttaaaggtcttccaggccctccaggccct
aaggggcaacaaggtgtaacaggatctgtgggtactcctggaccacctggcatcccaggt
tttgatggtgcacctggacaaaaaggagaacaggggccttttggtcctccagggccaaga
ggtcttactggtccaccaggtccagaggggttgccaggttcaatgggtcctccaggtact
ccttctgtcgatcatggattccttgttactaggcatagtcaaactacagatgatccacca
tgtccccctgggaccaaaataatctacaatggctattccttgctctatgtacaggggaat
gaacgagctcatggccaggacttgggtacagctggaagttgtctacgcaaattcagtacc
atgcccttccttttctgcaatattaataatgtttgcaactttgcatcaagaaatgactac
tcttattggttgtctactcctgagcctatgccaatgtcaatggcacccatttccggtgac
aacattaggccatttattagcaggtgtgctgtatgtgaggctcctgccatggtgatggcg
gttcacagccaaacaatccaaataccacagtgtcctaatggatggtcatcactttggatt
ggctattcttttgttatgcacaccagcgctggtgccgaaggttctggccaggccctagca
tccccaggttcctgtctagaagaatttcgaagtgcaccattcattgaatgccatggtcgt
gggacctgtaattattatgcaaatgcttatagcttctggcttgctactatagaaagaaat
gagatgttcaagaaacctactccatcgactttgaaagcaggagaactacgcacacacgtt
agccgctgccaagtctgtatgagaagaacataa
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