KEGG   Monodelphis domestica (gray short-tailed opossum): 100023921
Entry
100023921         CDS       T01031                                 
Symbol
KDM4B
Name
(RefSeq) lysine demethylase 4B
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mdo03036]
    100023921 (KDM4B)
Enzymes [BR:mdo01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     100023921 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     100023921 (KDM4B)
Chromosome and associated proteins [BR:mdo03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100023921 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD LBR_tudor SLX1_C DUF7141
Other DBs
NCBI-GeneID: 100023921
NCBI-ProteinID: XP_001375335
Ensembl: ENSMODG00000001130
UniProt: F7EPQ5
LinkDB
Position
3:441844238..442150379
AA seq 1227 aa
MRRCGLPGGPANPCPKSLLTHLFAGQGAGPCLVDRRSGGGGAELSAVANGRAGVGAGANG
GRGGAGPSRIELLLRRGRVLAERASKGARSQRRSQRLLAQPPRDGVTELTRRAVAIRFGT
EPLGIMGSENPSPQNPSCKIMTFRPTVEEFQDFGKYVAYIESQGAHRAGLAKVIPPKEWK
PRKTYDDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGDYRRLANSEKYCTPRHQDF
EDLERKYWKNLTFVSPIYGADISGSLYDADVEEWNIGNLNTLLDMVEHECGIIIEGVNTP
YLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGC
DAFLRHKMTLISPSILKKYSIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATL
RWIDYGKMATQCTCRKDMVKISMDVFVRVLQPERYELWKQGKDITALDHMKPTALTSPEL
MAWNETKAVLKAKLLRRSHRKKSQPRRHKTEDQKSLGEVMAAETLLEESKVKEEPKHGPD
LEEEEQHKAPEGGEGDGKTKIRAPRAKSDKKKKHHHHHHHHHHHHPPQPPQLLSPPPQIC
TDEDVPPPLPPILEPPILAPVSTATEEIFPLAAPLNIVHPSEVPSEEDDFKPRPIIPMLY
VVPRTNKVVFDKERVSCQQTLEHFAQKGQIWREQTVPMELTVKEEERIETEQVEVNPKAS
EVQAPSTFSKLKMEIKKSRRHPLGKPPTRSPLSVVKQEGSSDEEAFPFSGEEDVSDPEAL
KSLLSLQWKNKVHNFQAERKFNAAAALVEPYCAVCTLFYPYNQALQTDKETSPASLGETS
SLLPLSKCGQKTKPLIPEMCFTSSGENIEPLPANSYIGDDGTSLLIACAKCYLQVHASCY
GIRPDLVNEGWTCSRCTANAWTAECCLCNLRGGALQMTTDRRWIHVICAIAVPEVRFLNV
IERHPVDISAIPEQRWKLKCVYCRKRMKKISGACIQCSYEHCSTSFHVTCAHAAGVLMEP
DDWPYVVSITCFKHKAGSQGVQFLREVSLGQTVITKNRNGLYYRCKVIGTTTQTFYEVNF
DDGSYSDNLYPESIISRDCIQLGPPPEGEFVQLRWTDGNIYKAKFISAVISHIYQVEFED
GSQLMVKRGDIYTLEEELPKRVKSRLSVSTGAPQEKVSLGEEVKAAKRPRVGNARNSEDY
GQNPDYLAFMENLLQSQYQPGAQSHMF
NT seq 3684 nt   +upstreamnt  +downstreamnt
atgaggaggtgcggcctccctggaggcccggccaatccgtgcccgaagtcccttctaacc
cacctctttgctggccaaggggccgggccttgccttgttgatcggcggagcggaggggga
ggggcggagctgtcagccgtggccaatgggcgggcgggtgtgggtgctggggccaatggc
ggccggggcggtgcgggcccatcgcggatagagcttctgctgcggaggggtcgagtgctg
gccgagcgagcgagcaaaggggcccggtcccagcgaaggagccagaggctgctggcccag
ccaccccgcgacggagtgacggagctgacgcgccgggcggtggccatcagatttggtact
gaaccacttggaatcatggggtccgagaatccaagtccacaaaaccctagctgtaagatc
atgaccttccgccctacagttgaggaatttcaggactttgggaaatatgtggcctacatt
gaatcccaaggagctcacagagcaggacttgctaaggtgatcccacccaaggagtggaaa
cctaggaaaacttatgatgacattgatgacatggtgattccagctcccattcagcaggtg
gtgacaggacaatccggtttatttacccaatataatatacagaagaaacccatgacagtg
ggagattatcggcgcttggccaacagcgagaagtattgtactcctcgacatcaagacttt
gaagatctggagcgtaaatactggaagaacctgacttttgtatcaccaatctatggagct
gatatcagtggttctttatatgatgcagatgtagaggagtggaatattgggaatttgaac
acccttttggacatggtggaacatgaatgtgggattatcatagaaggagtgaacactccc
tacttgtacttcggaatgtggaaaaccacctttgcttggcacaccgaagatatggatctc
tatagtatcaactacctgcactttggggagcccaaatcttggtatgccatacctccagaa
catggcaagcgtctagaacgcctggcaaaagggtttttccctggaagttctcagggatgt
gatgcctttctccgtcacaagatgactctcatttctccctccattttgaagaaatacagc
attccttttgatcggataactcaggaggctggagagtttatgattacttttccctatgga
taccatgcaggattcaatcatggcttcaactgtgctgagtcaaccaattttgccacactg
cggtggattgattatggcaagatggctactcagtgcacctgccgaaaggacatggtgaaa
atttcaatggatgttttcgtgagagtgctacagccagagcgctatgaactgtggaaacaa
ggaaaagatattactgctttggaccacatgaaaccaactgcactaactagccccgagctg
atggcttggaatgagaccaaggctgtgctgaaagctaagctccttcgaaggtcccacagg
aaaaaaagccagcctagacggcataagacagaagaccagaagtctttgggagaggtcatg
gctgcagaaactcttttggaggagagcaaagtaaaggaagagcccaaacatggacctgac
ctagaggaagaagagcagcacaaagcccctgagggtggtgaaggggatggtaagaccaag
atccgtgctcccagggccaaaagtgataagaagaagaagcaccaccaccaccaccaccat
caccaccatcaccacccacctcagccgcctcagttgttgtcacctccaccccagatctgt
acagatgaagatgtccccccaccgctgcctcccatattggaaccccctatattagcacca
gtatctactgccacagaagaaatttttcccttagctgcccccctcaacattgttcaccct
tcggaggtgcccagtgaagaggatgactttaagcctcgacctatcattcctatgctttat
gtggttccacggaccaataaggtggtatttgacaaagagcgtgtatcttgccagcagaca
cttgagcactttgctcagaagggccagatttggagggaacagactgtccccatggagctc
acagtgaaggaagaagaaaggattgaaactgagcaggtggaggtcaatcccaaagccagt
gaggttcaggccccatctacattttctaaattgaaaatggagatcaagaagagccggcgt
catcctctgggtaaaccaccaactcgatccccactgtctgttgtcaaacaagaaggctca
agtgatgaggaagcgtttcccttctctggagaagaggatgtgagtgaccctgaggccttg
aagtctttactttccctccagtggaaaaataaagtgcataacttccaggcagagaggaag
ttcaatgcggctgcagccctagtagagccatattgtgctgtctgtactctcttctaccca
tataaccaggccttacagacagataaagagacttctccagcctctcttggggagacttcc
tcacttcttccactttccaaatgtggacagaagaccaagcccttgatcccagaaatgtgt
tttacttcaagcggtgagaatattgagcctctccctgcaaattcttatattggtgacgat
ggaaccagcctcctcattgcctgtgccaaatgctacttgcaagttcatgccagttgctac
ggaatccgtcctgatctggtaaatgaaggttggacctgttcccggtgcacagccaatgcc
tggacagcggaatgctgtttgtgtaacctcaggggaggagctcttcagatgacaactgat
agaaggtggatccatgtgatctgtgctattgctgtcccagaagtacgatttcttaatgta
atagagcgtcaccctgtggatatcagtgcaatcccagagcaacgatggaaattgaaatgt
gtttattgtcgaaagcggatgaagaaaatatccggagcttgtatccagtgttcctacgaa
cattgctctacttcttttcatgtgacctgtgcccacgcagcaggggtcctgatggaacct
gacgattggccatatgttgtgtctatcacttgctttaagcataaagcaggcagccaaggt
gtccaatttctaagggaagtgtcattgggtcagacagttatcacaaagaatcgcaatggc
ctctattatcggtgcaaagtaattggcacaaccacacagacattctatgaagtgaacttt
gacgacggttcctacagtgacaacttgtacccagagagcattattagcagagattgtatc
cagctgggaccgcctcctgaaggggagtttgttcagctccggtggactgatggaaatatc
tataaagccaagttcatttcagctgtgatcagtcacatttatcaggtggagtttgaagat
ggttcccagctgatggtgaagcgtggtgatatttatacccttgaggaggagctcccgaag
agagtcaaatctagactgtctgtcagtactggtgctccacaagagaaggtatcattagga
gaggaggtgaaggcagcaaagcgcccaagggtgggcaatgctcgaaattctgaggactat
ggacagaatcccgattacctggcctttatggagaacctactgcagtcacaataccagcct
ggagctcagagccacatgttttag

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