Monodelphis domestica (gray short-tailed opossum): 100024333
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Entry
100024333 CDS
T01031
Name
(RefSeq) ATP-dependent RNA helicase DDX19B-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03013
Nucleocytoplasmic transport
mdo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100024333
03015 mRNA surveillance pathway
100024333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100024333
Enzymes [BR:
mdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100024333
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100024333
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100024333
NCBI-ProteinID:
XP_001375627
UniProt:
A0A5F8H758
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Position
1:708003595..708037583
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AA seq
535 aa
AA seq
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MRALARRYAWTLPSPPRKAAAASAAVASRRRRSCARLASPAPLAPLSPLLLFRAFGTMAT
DSWALAVDEQEAAAESLSSLHIKEEKIKPDANGIVKADENSGKTDEEEKEDRAAQSLLNK
LIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALP
MMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPLNKYPQCLCLSPTYELALQTGKVIEQ
MGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEA
DVMIATQGHQDQSIRIQRMLPKDCQMLLFSATFEDSVWRFAQKVVPDPNIIKLKREEETL
DTIKQYYVMCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTAGWLAAELSKEGHQVALLS
GEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYL
HRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIDRLDTDDLDEIEKIAN
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccctagcacggcgctacgcctggaccctcccctccccaccgcgtaaggccgcc
gccgcctctgctgccgtcgcttcccgccgccgccgctcgtgtgcgcgcctggccagcccc
gccccgctagccccgctatccccgctgcttcttttccgcgcttttgggacgatggccacc
gactcttgggccctggcggtggacgagcaggaggcggccgccgagtcgttgagcagcttg
catatcaaggaagagaaaatcaaaccagatgccaatggtattgtcaaagctgatgagaat
tcaggaaagacagatgaagaagagaaagaggacagagctgctcagtcactgctgaacaag
ttgattagaagcaacctcgttgataacacaaatcaggtggaagtcctgcagcgggatcca
aattcccccctctattcagtgaagtcttttgaagagcttcgactgaaacctcagcttctg
caaggggtctatgctatgggctttaaccggccatctaagatacaagagaatgccctaccc
atgatgcttgctgaacctccacagaacctgattgcccagtctcagtccggtactggtaaa
acagctgcctttgtcctggctatgctcagccaagtggaacctttgaacaaatatccccag
tgtttgtgtctctcacccacttatgagctggctcttcaaacaggaaaggtgattgaacag
atgggcaaattttatccagaacttaaacttgcttatgctgttcgaggcaataaactggaa
agaggtcagaagattagtgagcagattgtcattggcactccgggcacagttctggattgg
tgctccaaactcaaattcatcgaccccaaaaagatcaaggtgtttgtcctggatgaagct
gatgtgatgatagctacccaaggccatcaagatcagagcatacgtatccagaggatgctt
cctaaggattgtcagatgctgcttttctctgctacttttgaagattctgtgtggagattt
gctcagaaagttgtcccagacccaaacatcatcaaactaaagcgagaagaagaaacttta
gataccattaaacagtattatgtgatgtgcaataaccgagatgagaagttccaggccctt
tgtaatctctatggagccatcactattgctcaagccatgatcttctgtcatacccgcaaa
acagctggttggctggcagctgagttatccaaagaaggccaccaagtggccctcttgagt
ggtgaaatgatggtggaacagagagctgcggtgattgagcgcttccgagaaggcaaggag
aaagtgttggtgactaccaatgtgtgtgctcgaggtatcgacgtggaacaggtatctgtg
gttatcaactttgacctgccagtggacaaggatgggaatccagacaatgaaacgtacctt
catcgtattgggcgcacggggcgctttggcaaacgaggcctggctgtgaacatggtggac
agcaagcacagcatgaacattctcaacagaatccaggaacatttcaataagaagatagac
agattggacaccgatgatttggatgagattgagaaaatagccaactga
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