Monodelphis domestica (gray short-tailed opossum): 100024467
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Entry
100024467 CDS
T01031
Symbol
PNN
Name
(RefSeq) pinin, desmosome associated protein
KO
K13114
pinin
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03013
Nucleocytoplasmic transport
mdo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100024467 (PNN)
03015 mRNA surveillance pathway
100024467 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100024467 (PNN)
03041 Spliceosome [BR:
mdo03041
]
100024467 (PNN)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100024467 (PNN)
Spliceosome [BR:
mdo03041
]
Complex C
Other components
EJC/TREX
100024467 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
100024467
NCBI-ProteinID:
XP_001370660
Ensembl:
ENSMODG00000011926
UniProt:
F7DZE3
LinkDB
All DBs
Position
1:complement(278264106..278274132)
Genome browser
AA seq
714 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDAEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNSKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNAMFEGRRNEFAEQINKMEARPRRQSMKEKEPQVVHN
EEQKAEQEEGKVAQREEEMEETGNQHNDVEIEDAGEEEEKEVGAVHSDAEKEQEEEHKKE
MEVKMEEENEVREKEKQQDSQPEEIMDVKEEGESVKNVDTEPEEMETNQVESLGPSENEN
SKEIGPELEGEAQPNKEYKPSSPVKESANVPEIENESEEKQEREPESQPEFVVQPQPQSQ
PQSQSHPLPSLQLQPQSLPQSETLPITLIEPPPQVVQESRHLTERKEFAIEPVKLSEVQI
EPVLTMPTESKTKTRSRSRGRARNKTSKSRSHSSSSSTSSSSSTSSSSGSSSSSGSSSSR
SSSSSSTSTSGSSSRDSSSSSTSSSESRSRSRGRGHNRDRKRRRSVDRKRRDTSGLERSH
NHKSSKGSSRDTKGSKDKSSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKRR
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcagtgagaactttgcaggagcagctggaaaaagcgaaggagagcttaaaa
aatgtggatgagaatatccggaagctcaccggccgagatccaaatgacgtgagacccatc
caagctcgattgctggccctctcaggccctggtggaggtaggggtcgtggtagtttattg
ctaaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggaggggagcgtcggacaagaagagaatcacgccaggaaagc
gacgcagaggatgatgatgttaaaaagccagcgttgcagtcttcagttgtagctacctcc
aaagagcgtacacgtcgagaccttattcaggatcaaaatatggatgaaaagggaaaacaa
aggaatcggcgtatatttggcttgttaatgggtacccttcagaaatttaaacaggagtcc
actgtagctacagaaaggcaaaagaggcgtcaagaaattgaacaaaaacttgaagtccaa
gctgaagaagaaagaaaacaagtcgaaaatgaaaggagagaactttttgaagaaaggcgt
gctaaacagacagaactgcgacttttggaacaaaaggttgaacttgctcagttgcaagaa
gaatggaatgagcataattctaagataattaaatatataagaactaagacaaagccccat
ttgttttacattcctggaagaatgtgcccagctacacaaaagctgattgaagagtcccag
agaaaaatgaacgctatgtttgaaggtaggcgcaatgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagaacctcaggtggtgcataat
gaagaacagaaggcggagcaagaagagggtaaggtggctcagcgtgaggaagagatggag
gagacaggtaatcagcacaatgatgtagaaatagaggatgcaggagaggaagaggaaaaa
gaagtaggtgcagttcatagtgatgcagagaaagaacaggaggaggagcataaaaaggaa
atggaggttaaaatggaggaggagaatgaggtgagggaaaaagagaagcagcaggatagt
cagcctgaagaaattatggatgtgaaggaggagggagaaagtgtcaaaaatgtagatact
gaaccggaggaaatggaaactaatcaagttgaaagtttagggccttcagaaaatgagaat
agcaaagaaataggcccagagttggaaggtgaggctcagccaaacaaagaatataaacct
agttctcctgtgaaggagagtgctaatgttccagaaattgaaaatgaatctgaagagaaa
caagagagagagcctgagtcccaaccagagtttgtggttcaaccccagccccaatcccaa
ccccagtcccagtctcatcccctgccctcactccagctccagccccagtccttgcctcag
tctgagactttgcccataacacttatagagccaccacctcaggtcgtgcaggaatcaagg
catctaaccgagaggaaagagtttgctatagaacctgtcaaactttctgaggtgcaaata
gagccagtcttgacaatgcctacagagagcaaaaccaaaacgaggagcagaagcaggggt
cgagccagaaacaaaactagcaagagtagaagtcatagcagtagcagtagcacctccagt
agtagttcaacaagtagtagtagcggcagcagctccagcagtggcagcagtagcagtcga
agtagttccagtagcagcactagcactagtggaagcagcagcagagacagtagcagtagc
agcactagtagcagtgagagtaggagtcgaagccgaggtcggggacataacagggataga
aagcgcaggaggagtgtggatcggaagcggagggatacatcaggactagaaagaagtcac
aatcacaagtcttcaaaaggtagtagcagagatacaaaaggatcaaaggataagagttct
cggtctgacagaaaaaggtctatatcagaaagtagtcggtcaggcaaaagatcttcaaga
agtgaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa
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