Monodelphis domestica (gray short-tailed opossum): 100024513
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Entry
100024513 CDS
T01031
Symbol
SPATA13
Name
(RefSeq) spermatogenesis associated 13
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100024513 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100024513 (SPATA13)
Membrane trafficking [BR:
mdo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100024513 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
100024513
NCBI-ProteinID:
XP_001375757
UniProt:
A0A5F8H0V5
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All DBs
Position
4:complement(294145204..294305594)
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AA seq
1270 aa
AA seq
DB search
MTAVQNGFGNSPTTTYVVMEPTESRTIINSACQNGVCKSSNNNDSETQEDKLSPSKFMRL
FSATRKRSSCNAERPRSMILMSNSSTWNALSSFRKMGSFKKLKSSVLQGIQGREDPDALS
EDASENDLGKHIPNGAVTGVQTNRYSYAGQLNDFHKDLDGGVSDCSDPEENDDTFLRNTH
RSRSIRRAYGVGRINLLDSDKHPGPQHSARPLSPIMQEPQICEILVKNSENNRIIYRRSK
STDNLNFLRKSSFKRKSTSNLTDLKVTNEKQEIQRTLSSPADSNKTGGLERRSKRWKSPI
RAKDFDRVLKLVSNVADAAWKRETPKNGTLSPSEPNQRIQLNSQLHDDYSRRVSTNTEHD
RKRCTSPVCNVESSFTVIPSLSSTVSQGTDTNIETKLFPLKAKPPQTSGCVPQSAESSLL
SPTALKAFVKDSDKPKNASQFTCESVPPSTPPWPTAPKPQSPVSENAKYNINFRCPNTHS
TLSLSSMESEERAEVAALKGKSPVSFQESVKTVYYDDGNEDSGISSHSQLSLNLATGPEE
RKEEVVTDEQWRKASSQDEEKAEPQKVTRRRWGSGKRSRPRPLSDYSQLTSRSFSIPEDS
VAMETQKLDCLDGGNQQSVASPETSDQNASLGYPRGCRKRRPISVIGGVSFYGNNQTEEI
ENLLTQPVTRPPVPAHQVPPYKAVSARFRPFTFSQSTPIGLDRVGRRRQMRTSNISTDGA
TESSALVDDNGSEEDYSYEELCQASPRYLQPGGEQLAINELISDGNVVCAEALWDHVTMD
DQELGFKAGDVIQVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEELSENSSSTQGEEQ
DSDTGKHRQKHSENKDQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTVAQL
GTIFGNIEEIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGAC
LELSNLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHS
DYNNIKAAYETMKNVACLINERKRKLESIDKIARWQVSIVGWEGLNILDRSSELIHSGEL
TKITKQGKSQQRTFFLFDHQLVFCKKDLLRRDMLYYKGRIDMDEMELMDIEDGRDKDYNI
NVKNAFKIINKSTDEVYLFCAKKQEDKGRWLQACADERRRVQEDKEMGMEISESQKKLAM
LNAQKPGHGKSKGYNGCSLPPPHQSLHPIHQRHITVPTSIPQQQVFALAEPKRKPSLFWH
TFNKLTPFKK
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggtgcaaaatggctttggaaatagccctactaccacctatgtagttatggaa
ccaactgagtccagaacaatcattaattctgcttgtcagaatggggtgtgcaagagtagt
aacaacaatgattcagaaacccaggaagacaaactcagcccttccaaattcatgcgtctt
ttttctgctactagaaagagaagtagctgcaatgcagaaaggccccgctcgatgattctc
atgagcaattcctcaacctggaatgctctatcttcctttaggaaaatgggatcatttaaa
aaactgaagtcttcagttctgcaaggaattcagggtcgggaggacccagatgccttaagt
gaggatgcttccgaaaatgacttgggaaaacacattcccaatggtgctgtgacaggagtc
caaacaaacaggtattcttatgcagggcaattgaatgatttccacaaggacttggatggg
ggagtatcagattgctctgacccagaagaaaatgatgataccttcctaaggaatactcac
aggtcaaggagtatcaggagagcatatggtgttggacgaataaacttattggactctgat
aagcatcctggcccccagcactctgcgaggcctctgtcacctatcatgcaggagccccaa
atctgtgaaattctggtgaaaaactctgaaaacaaccgtattatctacaggagaagcaag
agtactgacaacttgaactttttaaggaaaagttctttcaagaggaagtccacctccaac
ctcactgacctcaaagtgacaaatgagaaacaagaaattcaaaggacattaagttctcct
gctgactccaataaaaccggtgggttggagaggaggtcaaaacgctggaagagtccaata
agagccaaggattttgatagagttttgaaactcgtaagtaatgttgctgatgctgcttgg
aagagagagactcctaagaatgggacactgtctccgagtgaaccaaaccaaagaatacag
ctcaacagccaactccatgacgattactcccgccgtgtttctaccaatacggaacatgac
cgaaagagatgtacatccccagtatgcaatgtagagtcttcctttacagtaattcctagc
ctcagttcaactgtttctcagggcactgatacaaatattgaaacaaagctgtttcctctc
aaagccaaacccccccagacatcaggatgtgtccctcagtctgctgaaagttccttgttg
agccccactgccctgaaagcatttgtcaaagactctgataaaccaaaaaatgctagccag
tttacatgtgaatcggtgccccccagcacgcctccttggcccactgcccccaaacctcaa
agtcctgtttcagaaaatgccaagtacaatattaatttccgttgtccaaacacccatagc
acattgtcactgagctcgatggaaagtgaagaaagagcagaggtggctgccctgaagggg
aaaagtccagtgtccttccaggagtcagtgaaaaccgtgtattatgatgatggtaatgaa
gacagtggcatcagcagccattctcagctgagcctcaatttagccactggtccggaggag
agaaaggaggaggttgttactgatgaacagtggaggaaggcttcatctcaggatgaagaa
aaggcagagccacaaaaagtcacaagaaggagatggggttctggaaaaagatctcgacct
aggcccctctctgattacagtcagttgacaagcagaagtttctccattcctgaggattcg
gttgccatggaaacccagaaactggactgcctggatggaggaaatcagcagagtgtggcc
tcccctgagacttctgaccaaaatgcttctttgggctacccaagaggatgccgaaaaaga
agacccatctctgtgataggcggggttagcttctatgggaacaaccagacggaagaaata
gaaaatctcctgacccaaccagtaacaaggcccccagttcctgctcatcaagtgccacca
tataaagctgtttctgcccggttccgacctttcacattttcccaaagcacgcccattggg
ctggaccgagttggacgcagacgacagatgagaacatctaatatttcaacagatggagcc
acagagtcatctgccttagttgatgataatggcagtgaggaagattacagttatgaagag
ctctgtcaagccagccccagatacttacagcccgggggagaacagctagccatcaacgag
ctgatcagcgatggcaatgtggtctgtgcagaagctctgtgggatcatgtgaccatggac
gatcaggaactgggcttcaaagccggagatgtcatccaagtactggaggcctcaaataag
gactggtggtggggcagaaatgaggataaggaagcctggtttcctgctagttttgtcagg
ttaagagtcaatcaggaagaactctcagagaattccagcagtactcagggtgaagagcaa
gattcagacactgggaagcaccgccagaaacattcagaaaacaaagaccagatgaggacc
aatgttatacaggagatcatgaacaccgagcgcgtctatatcaagcatctcaaagacatc
tgtgagggctatattcgtcagtgtcgaaaacatacaggaatgttcactgttgcccaactg
ggtactatttttggaaacattgaagagatttacaaattccaaaggaagttcttgaaagat
cttgagaagcaatacaataaagaggaacctcatctgagtgaaataggatcttgctttctt
caacatcaagaaggctttgccatctattctgaatactgtaacaaccatcctggggcctgc
ctggagctctctaacctgatgaagcagggcaagtacaggcatttctttgaagcttgtcgc
ctgcttcagcagatgattgacatagccattgatgggtttctccttactcctgttcagaag
atttgcaaataccctctgcagctagctgagctactaaagtacaccactcaagaacacagc
gattacaacaatataaaggcagcgtatgagaccatgaagaatgtagcctgcttaatcaat
gagcgtaaaaggaagttggagagtatagacaagatagcacgctggcaagtgtccattgtg
ggctgggaggggctcaatattttagaccggagttcagaactgatccattcaggagaactg
accaaaatcacaaaacaaggaaagagccagcagaggactttcttcctctttgaccaccag
cttgttttctgcaagaaggacctactaaggcgagacatgttatactacaaaggccgaatt
gacatggatgagatggagttgatggacatagaggatgggagggacaaggactataatatc
aatgtaaagaatgccttcaaaatcatcaataaatcaacagatgaggtgtacttattttgt
gccaaaaagcaagaggataaaggcaggtggctacaagcctgtgctgatgaaaggaggcga
gtacaagaagacaaagaaatgggaatggaaatatcagaatctcaaaagaaacttgctatg
ttaaatgctcaaaaaccaggccatggaaagtcaaaaggttataatgggtgttccctacct
cccccccatcaaagtttgcatcctattcatcaacgccacatcacagtgcctaccagcatt
cctcaacaacaagtttttgccctggcagaacctaagagaaagccatctcttttttggcac
accttcaataaactcacccctttcaagaaatga
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