Monodelphis domestica (gray short-tailed opossum): 100024739
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Entry
100024739 CDS
T01031
Symbol
VPS11
Name
(RefSeq) VPS11, CORVET/HOPS core subunit
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04140
Autophagy - animal
mdo04148
Efferocytosis
mdo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100024739 (VPS11)
04148 Efferocytosis
100024739 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100024739 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100024739 (VPS11)
Membrane trafficking [BR:
mdo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100024739 (VPS11)
Hops complex
100024739 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
TPR_GEMI5
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
zf-RING_11
Paralemmin
zf-ANAPC11
zf-C3HC4_3
DLP_helical
zf_RING_Vps8_fungal
zf-RING-like
DUF1993
Motif
Other DBs
NCBI-GeneID:
100024739
NCBI-ProteinID:
XP_001370567
Ensembl:
ENSMODG00000013300
UniProt:
F6ZJC0
LinkDB
All DBs
Position
4:complement(230886253..230899973)
Genome browser
AA seq
939 aa
AA seq
DB search
MAAYLQWRRFVFFDKELVKDSAGGDGTGPGPAPGSGATKPLSLPPGITVCDSGRGSLVFG
DMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKVWNLEKRD
GGNPLCTRIFPAIPGSEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQIL
HKGSYPVTGLAFRQAGKTTHLFVVTTENVQSYTLSGKDYPRIELDTHGCGLRCSALSDPS
QDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKISPKSEFTNRD
SQSSDKQILNIYDLCNKFIAYSSVFEDVVDVLAEWGSLYVLTRDGRVHVLQEKDTQTKLE
MLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEPSY
VIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSESEV
HFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKVQLEDIKNYQEALQYIGKLPFEQAE
SNMKRYGKILMHHVPEQTTQLLKVLCTDYRPCAEAAADVDGPGCRANSEEFIPIFANNPR
ELKAFLEHMTEVQADSSQGVYDTLLELRLQNWAHEKDSQVKEKLHGEALSLLKSGHFSSV
FDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVIAVCERHGEQEPCLWEQ
ALSYFARKEEDCKEYVAAVLKHIESKNLMPPLLVVQTLAHNSTATLSVIKDYLVQKLQKQ
SQQIEKDELRVRRYREETTRIRQEIQELKTSPKIFQKTKCSICTSALELPSVHFLCGHSF
HQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKYSNDSFSVIADYF
GRGVFNKLTLLTDPPVGRVGTSLEAGLQRDLLMHSKRGT
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttacttgcaatggcgccgcttcgtattttttgacaaggaactagtaaaggat
tctgcgggtggcgatgggaccggacctggacccgcgcctggatcgggggcaacaaaacct
ctcagtctcccgccaggcatcactgtctgcgattcaggcagggggagcttggtctttggg
gacatggaaggacagatctggttcctgccccgctccctgcagctcacgggctttcaggca
tacaaactccgggtaacccacctatatcagctgaaacagcacaatatcctggcatctgtg
ggagaggacgaagaggggatcaatcctttggtgaaagtctggaatctggagaagagagat
ggtgggaatcccctctgcactcgaatcttccctgccattccagggtcagagccaactgta
gtgtcctgtttgacagttcatgaaaatctcaatttcatggctattggctttacagatggt
agtgttacccttaataaaggtgatatcacaagggaccggcatagcaagacccagattttg
cacaagggtagctatcctgtcactgggctggccttccgacaggcaggcaagactacccac
ttatttgtggtgacaacagagaatgtgcagtcttatactctgtctggaaaggactaccct
cggatagagttagatacccatggctgtggcctgcgctgctcagccctaagtgatccttcc
caggacctgcagtttattgttgctggggatgagtgtgtttacttatatcagcctgatgag
cgtggcccttgctttgcctttgagggccataagctcattgcccactggttccgtggctac
cttgttattgtttcccgggaccgcaagatttcacccaagtcagagttcacgaacagggat
tcccagagctctgacaagcaaatcctcaacatctatgatctttgcaacaagttcattgcc
tacagctctgtctttgaggatgtggtagatgtgctggctgagtggggctctttatacgtg
ctgactcgggatgggcgagtccatgtgcttcaggaaaaggacactcagactaaactggag
atgttgttcaaaaagaatctgtttgagatggcaatcaacttggccaaaagccagcacctt
gatagtgatggactggcacagattttcatgcagtatggagaccacctctacagcaaaggc
aaccatgatggtgctgtccagcagtatatccgaaccattggaaagttggagccatcctat
gtgatccgaaaattcttagatgctcagcgcatccacaatcttactgcctatctacaaacc
ctgcaccggcagtcactggctaatgctgaccataccaccctgttgcttaattgctacacg
aagctcaaggacagttccaagctagaggaattcataaagacgaagagtgaaagtgaagta
cactttgatgtagaaacagctatcaaggtccttcggcaggctggctactactcccatgcc
ctgtacttggctgagaaccatgctcatcatgagtggtacctgaaggtccagctagaggac
atcaagaactaccaggaagcattgcagtatatcggaaagctgccctttgagcaagcagaa
agcaacatgaagcggtacggcaagattctcatgcatcatgtcccagaacaaaccacccag
ctgctaaaggtcctgtgtactgactatcggccctgtgcagaggctgctgctgatgttgat
gggcctggctgcagggccaattcagaggaattcattcctatttttgccaacaacccccgg
gaactgaaggccttcctagagcatatgactgaagtacaggctgactcttcccagggtgtc
tatgatactctactagagctgagactgcagaattgggcacatgagaaggactctcaggtt
aaggagaagctgcatggggaggcgctctctctcctgaagagtggccacttttccagtgtc
ttcgataaggctttggttctctgccagatgcatgatttccaagatggggtcctatacctg
tatgagcagggaaagctgtttcagcaaattatgcattaccacatgcagcatgaacagtat
cgacaagtgatcgctgtctgtgaaaggcatggggagcaggagccctgtctgtgggagcag
gctctcagctactttgccagaaaggaggaagactgcaaggaatatgttgctgctgtcctc
aaacacattgagagcaagaacctcatgccaccccttttagtggtgcagaccttggctcac
aattctacagctaccttgtctgtcatcaaagactatttggtacagaaacttcaaaagcag
agtcagcagattgagaaagatgagcttcgggttcgaaggtaccgggaagaaactactcga
atacgccaggagatccaggagctgaagaccagcccaaagatcttccagaaaaccaagtgc
agtatatgtaccagtgccctggagctaccctctgtccacttcctgtgtggccattcattc
caccaacactgttttgagagctactcagaaagtgatgctgactgccccacctgcctccct
gagaaccgcaaagttatggacatgatccgagcccaagagcaaaagcgggatttgcacgat
caatttcagcatcagctcaagtactctaatgacagcttctctgttattgctgactacttt
ggacgtggtgttttcaacaagttgactctgctgactgatccaccagtgggcagagtgggc
accagcctggaggctggactgcagcgagatctgctcatgcactcaaaacggggtacctaa
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integrated database retrieval system
