Monodelphis domestica (gray short-tailed opossum): 100024748
Help
Entry
100024748 CDS
T01031
Symbol
CLSTN1
Name
(RefSeq) calsyntenin 1
KO
K22659
calsyntenin 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mdo04515
]
100024748 (CLSTN1)
Cell adhesion molecules [BR:
mdo04515
]
Cadherins
Cadherin related
100024748 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
CDC45
Laminin_G_3
Laminin_G_2
PGA2
EphA2_TM
Glyco_hydro_16
Toxin_R_bind_N
SID-1_RNA_chan
V_ATPase_I
PFF1_TM
Cadherin_C_2
Zip
Piezo_TM1-24
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
100024748
NCBI-ProteinID:
XP_003341079
Ensembl:
ENSMODG00000002944
LinkDB
All DBs
Position
4:371894457..371981449
Genome browser
AA seq
999 aa
AA seq
DB search
MLPQQPPPPESRQPQQRSHRRSPPAASSWLVTATALLGLCGGGWAARVNKHKPWIETTYH
GIVTENDNTVLLDPPLIALDKDAPLHYAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDK
STGEGIIRSKEKLDCELQKDYTFTIQAYDCGKGPDGANSKKSHKATVHIQVNDVNEYAPI
FKEKSYKATVIEGKKYDNILKVEAVDADCSPQFSQICSYEIVTPDVPFIIDKDGYIKNTE
KLSYGKESQYKLTVTAYDCGKKRATEDVLVKISIKPTCKPGWQGWNKRIEYEPGTGSLAL
FPNIHLETCDEPITSIQATVELETSHIGKGCDRDTYSEKSLHRLCGASSGTAELLPPPSS
TLNWTVGLPTDNGHDSDQVFEFNGTQAVKIPEGVVTVNLKEPFMISVWMRHGPGGRDKET
ILCNSDKTDMNRHHYSLYVHNCRLVFLFRQDPSEEKNYKPAEFHWKLNQVCDKEWHHYVL
NVEFPSVTLYVDGVSYDPFPVTEDYPLHPSKIETQLVVGACWQEYSGNENDNETEAEAVT
VTSAGGELHMAQFFRGNLAGLMIRSGKLENKKVIDCLYTCKEGLDLQVTDSKGMKVQANP
SQSVLTLEGDDIEQFEKAMQHISYLNSRQFPTPGIRRLQITSTIKCFSEDACMSVPLVDG
YVMVLQPEEPKISLSGINHFARAASEFESAEGVSLFPELRIISTITREVEQDADGDEEPT
VQESLVSEEIMHNLDTCEITVLGQELNQDEESLEVDTARLQQKGIEMSSSSVGVIITGVD
TMASYEELLHLVRYRNWHASASGLDRKFKLVCSELNGRYVSNEFKVEVSVIHTANPVEHA
NHMAAQPQFVHPVHHSFVDLSGHNLANPHPFSVVPSTATVVIVVCVSFLVFMIILGVFRI
RAAHQRTMRDQDSGKENEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEEEESEDGEEE
DDITSAESESSEEEEGERERQHHVNRQQQLEWDDSTLSY
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgcagcagccgccgccgccggagtctcggcagccgcagcagcgcagccatcgc
cgctccccgcccgccgcctcctcctggctcgtgacggccaccgcgctgctcgggctctgc
ggcgggggctgggcggcgcgagttaacaagcacaagccatggattgaaacgacatatcat
ggtatagtcacagaaaatgacaacacagtgcttttggatcctcctttgattgctctggat
aaagatgcacccctacattatgcagagagttttgaggtgacagtcaccaaagaaggtgag
atatgtggatttaagattcatgggcaaaatgttccctttgatgctgtggtggttgataaa
tccactggtgagggcataattcgctccaaagagaagctggactgtgaacttcagaaagac
tacactttcaccatccaggcctacgactgtgggaagggaccggatggagccaattcaaaa
aaatctcacaaagcaacagtacatattcaggtgaatgatgtgaatgaatatgcccctata
tttaaagaaaaatcctacaaagccacagttattgaggggaagaaatatgacaacatttta
aaagtggaagcagtggatgcagactgttcccctcagttcagccagatctgcagctatgaa
attgtaactccagatgtgcccttcatcattgataaggatggttatatcaaaaacactgag
aagttaagctatgggaaagagtctcagtataagctgacagttactgcatatgactgtggg
aagaaaagagctactgaagatgtgttggtcaagattagcattaaacctacatgcaagcct
gggtggcaaggatggaacaaaaggattgagtatgagcccggtactggttctttggctctt
ttccccaacatccacttggagacttgtgatgaacccatcacctccatccaagcaacagtg
gagttagaaaccagccacataggaaaaggctgcgatcgggacacctactctgagaagtcc
cttcatcggctctgcggtgcatcctctgggactgctgaacttcttcctcctccaagcagc
accctgaactggaccgtgggcctccccaccgataacggccacgacagcgaccaggtcttt
gaattcaacggcacccaagccgtgaagattcccgagggcgtcgtcaccgtgaacctgaaa
gagcccttcatgatctcggtgtggatgcggcacgggccggggggcagggacaaggagacg
atcctctgcaattcagataagacagatatgaaccggcatcattattctctctatgtacat
aactgccgattggttttcctcttccgtcaagacccttcagaagagaagaattacaaacct
gctgaatttcactggaaactgaaccaggtgtgtgataaagagtggcaccattacgttctc
aatgtggaattccccagtgtgacgctgtatgtcgatggcgtttcctatgatccctttcca
gtgacagaagattatcctcttcacccgtccaagatagaaactcagctggtggttggagcc
tgctggcaagagtattcaggaaatgaaaatgacaatgagactgaggctgaggcagtgact
gtgacctctgcagggggtgagctacacatggcccaatttttccgaggtaatctggctggc
ttaatgattcgctctgggaaactggaaaacaaaaaggtgatagattgtctgtacacctgc
aaggaaggactagatttgcaagtgactgacagcaaaggcatgaaggtccaagcaaacccc
agccagtcagtgctgaccttggagggagacgatatcgaacaattcgagaaggccatgcag
cacatttcctacctgaattctcgacagttccccactccgggaatccgaaggctgcagatc
accagcaccatcaaatgcttcagtgaggatgcctgcatgtcagtccctctggtggatggc
tatgtaatggttttacagcccgaggaacccaaaatcagcttgagtgggattaaccatttt
gctcgggcagcttcagaatttgaaagtgccgaaggggtttccctgttcccagagcttcgg
atcatcagtaccatcacccgggaagtcgagcaagacgcagatggagatgaggagcccaca
gttcaagagtcactggtgtccgaggaaatcatgcacaatctcgacacgtgtgagatcacg
gtgttgggccaggagcttaaccaagatgaggaaagtttggaagtggacacggctcgcctg
cagcagaagggcattgagatgagcagctccagcgtgggtgtgatcatcacaggtgtggac
accatggccagctacgaggagctgctgcatctggtgcgctaccggaactggcacgcctcc
gcatctggcttggacaggaagttcaagctggtgtgttccgaactgaacgggcgctacgtc
agcaacgaattcaaagtcgaggtgagtgtcatccacacggccaaccccgtggagcacgct
aaccatatggccgcccagcctcagtttgtccatcccgtgcatcactcctttgtcgatctg
tctggccacaatctcgcaaatccccacccgttttcagtggttcccagcacagccactgtt
gtgattgtggtgtgcgtcagcttcctggttttcatgatcatcctgggagtgttccgcatc
cgggccgcgcaccagcgcaccatgcgggatcaggactcggggaaggagaacgagatggat
tgggatgactctgccctgaccatcacagtgaaccccatggagacctatgaggaccaacac
agcagtgaagaggaagaggaggaggaggaagaagaggaaagtgaggatggggaggaagaa
gatgatatcactagtgccgagtctgaaagcagcgaggaggaagaaggggagcgagaaaga
cagcatcacgtgaatcgacagcagcagctagaatgggacgactcgaccctcagctactga
DBGET
integrated database retrieval system
