Monodelphis domestica (gray short-tailed opossum): 100025259
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Entry
100025259 CDS
T01031
Symbol
NHLRC1
Name
(RefSeq) NHL repeat containing E3 ubiquitin protein ligase 1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100025259 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdo04121
]
100025259 (NHLRC1)
Enzymes [BR:
mdo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100025259 (NHLRC1)
Ubiquitin system [BR:
mdo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100025259 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4
Baculo_IE-1
zf-C3HC4_4
RING_XB3-XBAT31
Prok-RING_4
zf-RING_4
zf-C3HC4_2
WD40_WDHD1_1st
FYVE_2
Motif
Other DBs
NCBI-GeneID:
100025259
NCBI-ProteinID:
XP_001376254
Ensembl:
ENSMODG00000011227
UniProt:
F6S7J7
LinkDB
All DBs
Position
3:321906486..321908845
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AA seq
405 aa
AA seq
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MSAEASEREPALRALMREAEVSLLECKVCFEKYSHEKDRRPRNLACGHVICQGCVTALTQ
PRTRTLECPFCRKASKSSETSDCLPLLQFLELLGPVLCAPPSAGAGAAREPGDPTANWVP
GALTCCHSFGGWGTLINPTAMALCPRSGRVIVVHDGRKRVKVFDSDGICSHQFGEKGEAA
QDVRYPLGVTATSDGHIVITDAGDRSVKVFDFSGHHKLVIGGRFSLPWGVQTTPQQEVLV
SDAGAGSLHLLVVDFQKGELRRVERLLAHLCNPRALAVSQLTGAIAITEHLLAQGSCPPS
TRVKVFGPGLQLLGQVDTFGLSLFIPSKIDVTAVTFDHQGNVIVADTATQAIVCLGKPEE
FPVLKPIITHGLSYPVALTYTEDNALLVLDSGVHAVKVYKTDCSF
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagaggcttccgagagagagccggctctgagggctctgatgagggaagctgag
gtcagcctgcttgagtgcaaagtgtgcttcgaaaaatacagccacgagaaagaccggagg
cccaggaacttggcctgtggccatgtgatctgccaggggtgtgtgactgccctgacgcag
ccccggactcgcactctcgagtgccccttttgcaggaaagcgagcaagagctccgagacc
agtgactgcctcccgctgctacagttcctagagctcctgggcccggtgctctgcgcaccc
ccatccgcaggggcgggggcggccagggaacctggagacccgacagccaactgggtcccg
ggggctctaacctgctgccattcctttgggggttgggggacccttatcaaccccactgcg
atggccttgtgcccaaggtccgggagggtgatcgtagtgcatgacggcaggaagagggtg
aaggtatttgactccgacggaatatgtagccatcagtttggagaaaaaggggaggccgcc
caggacgtccggtaccctctgggtgtcacagccacctctgacggccacatagtcatcacc
gatgctggggaccgttcagtgaaagtgtttgatttttcagggcatcataagctggtcatt
ggaggtcgcttctctttgccctggggtgtgcagaccaccccgcagcaggaagttctggtg
tctgatgctggggcagggtcgcttcacctcttggtggttgactttcagaaaggggagctc
aggagggtggaaaggctcctggctcatctttgcaaccccagagccctagctgtgtctcag
ctcactggggccatcgccataacggaacacctgctagcccaagggtcctgccctcccagc
accagagtgaaagtgttcggccctggcttgcagctcttgggccaggtggacacttttggc
ctgagcctcttcattccctccaaaatagatgtcactgctgtgacctttgaccaccagggg
aatgtcattgttgctgatacagctactcaagctatagtgtgcttggggaaacctgaggag
tttccagtcttgaagcctatcattacccacgggctttcttaccctgtggcattgacttac
acagaagataacgcccttcttgtcctagacagtggagtccatgctgtaaaagtctataaa
actgactgctcattctag
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