Monodelphis domestica (gray short-tailed opossum): 100025482
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Entry
100025482 CDS
T01031
Symbol
HBS1L
Name
(RefSeq) HBS1 like translational GTPase
KO
K14416
elongation factor 1 alpha-like protein
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03015
mRNA surveillance pathway
mdo05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100025482 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
100025482 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100025482 (HBS1L)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100025482 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
UBA_RAD5A
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
100025482
NCBI-ProteinID:
XP_007484648
Ensembl:
ENSMODG00000017499
LinkDB
All DBs
Position
2:complement(409945508..410078440)
Genome browser
AA seq
683 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPPSFVEPVEEYDY
EDTKESANSVSNHQLSGIDQARLYSCLDHMREVLGNDVSDQKLIEAVLQNKFDVQKALAM
VLDQDKKQATSEDAVSIGKATKGKAVDPLSFRNESEIVPKVTKMTVSGKKQTMGFEVPGV
TAEENGDSVHTPHKGPPSEDSNIASSGILEPVSKSALPSHTIQALEEQTTPTPVKKSNKL
KQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKK
AGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQ
ADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEI
TSKLGHFLKQAGFKESDVALIPTSGLSGENLITKSSSSDLTKWYPGQCLLEQLVNSFKPP
QRSIEKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGIMLHDEP
VDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKEPIKACTRFRARILIFNIEIPITKGFPV
LLHYQTVSEPATIRRLISILHKSTGEVTKKRPKLLTKGQNALVELQTQRPVALELYKDFK
ELGRFMLRYSGSTIAAGVVTEVQ
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggctcgacacaggaacgtccgaggctacaactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttctccatcaacagctgctcagttt
atttactcaagacgtgataaaccaccgtcatttgttgagccagtagaagaatatgactat
gaagatacaaaagaatctgcaaactctgtttctaatcaccaacttagtgggattgatcaa
gctcgtctttattcatgccttgatcacatgagagaggtacttggaaatgatgtctctgat
caaaaactgattgaagcagtgctacagaacaaatttgatgtgcagaaagccttagcaatg
gtgcttgatcaagataaaaagcaggccacaagtgaggatgctgtctccataggaaaggca
acaaaaggaaaagcagtagatcctctgtcatttcgaaatgaatctgaaattgtgccaaaa
gttaccaaaatgactgtatctggaaagaagcaaactatgggatttgaagtgcctggagtg
actgctgaagaaaatggcgatagcgtccacacacctcataaaggacctcctagtgaagat
tccaacattgcttcttctggtattcttgaaccagtttctaaatcagctcttccatcccac
accattcaggcattagaagaacagacaacgccaacaccagtgaaaaagtccaacaagctg
aagcagcaaatagatgtgaaggctgaactggagaagaggcaagggggaaagcagctgctc
aacttggtggtcattggtcatgtagacgctgggaaaagcactctgatgggtcatctgctt
tatctcctgggcaatgtaaataaaagaactatgcacaaatatgaacaagaatctaaaaag
gctggtaaagcctcctttgcttatgcatgggtcttggatgagactggagaagaaagagaa
agaggagttacaatggatgtgggtatgacaaagtttgagaccaagaccaaagtcattaca
ttaatggatgctccaggccataaggatttcattccaaatatgattacaggagctgcccag
gctgatgttgctgttttagttgtggatgccagcaggggggaatttgaagccgggtttgag
actggaggacagacacgagaacatggactcttggttcgttctcttggagtgacacagctg
gcagttgcagttaataaaatggatcaggttaattggcagcaagaaagatttcaggagatt
actagcaaacttggacacttccttaagcaggctggttttaaggaaagtgatgtggccctc
atccctacaagtggtctcagtggagaaaacctaattaccaaatcctcatccagtgaccta
acaaaatggtatccaggacagtgtttgttagaacaattggtaaattctttcaagcctcca
caaagatctattgaaaaaccttttagattatgtgtatctgatgtctttaaagatcaagga
tctggattttgtgtgactggtaaaattgaagctggttatatccagactggtgaccgattg
ctagcaatgcctcctaatgaaacttgtactgcaaaaggaatcatgctacatgatgaacca
gttgattgggcagcagcaggagatcacgttagtctcaccttggttggtatggatattatc
aaaatcaatgttggttgtattttctgtggtcccaaagaacccattaaagcctgtactcgt
ttcagagctcgaatcctcatctttaatattgaaattcccatcactaaaggattccctgtg
ctgttacactatcaaactgtaagtgaacctgctaccatcagaagattgattagcatccta
cacaaaagcactggtgaggtcacaaagaaaagacccaagttgttgactaaaggccagaat
gctttagtagaactacaaacacaaagacctgttgctcttgaattatacaaagattttaaa
gaactggggagattcatgctgcgttacagtggttctactattgctgcaggtgttgtcact
gaggtacagtaa
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