KEGG   Monodelphis domestica (gray short-tailed opossum): 100025514
Entry
100025514         CDS       T01031                                 
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04151  PI3K-Akt signaling pathway
mdo04382  Cornified envelope formation
mdo04510  Focal adhesion
mdo04512  ECM-receptor interaction
mdo04820  Cytoskeleton in muscle cells
mdo04926  Relaxin signaling pathway
mdo04933  AGE-RAGE signaling pathway in diabetic complications
mdo04974  Protein digestion and absorption
mdo05146  Amoebiasis
mdo05165  Human papillomavirus infection
mdo05200  Pathways in cancer
mdo05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    100025514
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100025514
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100025514
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100025514
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    100025514
  09154 Digestive system
   04974 Protein digestion and absorption
    100025514
  09158 Development and regeneration
   04382 Cornified envelope formation
    100025514
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100025514
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100025514
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100025514
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    100025514
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    100025514
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mdo04147]
    100025514
   00536 Glycosaminoglycan binding proteins [BR:mdo00536]
    100025514
Exosome [BR:mdo04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   100025514
Glycosaminoglycan binding proteins [BR:mdo00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100025514
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 100025514
NCBI-ProteinID: XP_007507010
LinkDB
Position
X:complement(6818529..6913836)
AA seq 630 aa
MRAAAAGTAASLLCFLGLSQWGWPADAAACHGCSSGPKCDCSGVKGEKGERGLPGLDGHP
GLPGFPGAEGPPGPPGQKGDDGAPGPAGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQ
GIPGCNGTKGERGFPGVSGAPGLLGRPGPPGAPGRKGQPGSIILSVLPGPKGDPGDPGLP
GRQGPAGATGNPGPLGSPGMPGWMGPPGPPGIQGPKGNMGLNFQGPKGEKGEQGLQGPPG
PPGQLGELKGSNDTELLKGDQGVPGDQGSPGPPGLHGPPGRPGGEKGEKGRQGEPGQKGK
AGRDGDGGLPGIRGMPGDPGSPGKPGRAGEKIAAWRYEAFVSPGCDHLNSSLQRLRAEPN
KTVMDYWPPLTVIPWRGTGEKGDLGSPGLPGEKGEQGFPGVPGPPGLPGSPGTTVTGPPG
PPGFPGERGQKGAQGLPGTAMPGQPGLDGLPGAPGPPGTPGKPGPHIPSNGEICEKGPQG
PPGSPGDRGIPGEQGMKGDKGDTCLNCIEMGLAGPPGQPGLPGPPGLTGARGFPGPNGVK
GYVGATGPVGSPGLPGAPGTPGLPGPKGNPGHTLTFPEMKGDKGDTGFPGAPGIPGLSGT
PGQDGLPGPPGIKGKAVSSFIVGVIPKIAS
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgagggcggccgccgcggggaccgccgccagcttgctctgcttcctgggcctgagccag
tggggctggcccgccgatgcggccgcttgccatgggtgttcatctggacccaagtgtgac
tgtagtggagtaaaaggagagaagggagagagaggacttccaggtctggacggccatcca
ggtttacctggatttcctggagcagaagggcctcctgggcctccaggccaaaagggtgat
gacggtgctcctgggccagcgggccccaagggaatcagggggccccctggacttcctgga
ttcccaggtacaccaggtcttcctggaatgccaggccatgatggggccccaggacctcag
ggcatcccagggtgcaatgggacaaagggagaacgtggattcccaggcgtttccggtgca
cccggtttactaggtcgcccaggtcctcctggggcaccagggaggaaggggcaaccaggg
agtataattctgtccgtgctgccgggcccaaagggggacccaggtgatccagggctccca
ggaagacaaggtccagctggtgcaacaggaaacccagggccccttggttcccctggcatg
ccaggttggatggggccgcctgggccaccaggcattcaaggaccaaaggggaatatgggc
ttgaatttccagggacccaaaggtgaaaagggtgagcaagggctgcagggcccacctgga
cccccgggacagcttggagaactgaaaggatcaaatgatacagagctactgaaaggagat
cagggtgttcctggtgaccaaggctcacctggacctcctgggctccatgggcctcctggt
cgtcctggtggtgagaagggtgagaagggccgacaaggagagccaggccagaagggtaag
gcaggcagagatggagacggtggcctcccgggcattcgaggcatgcctggtgatcccggg
agtcctggtaaacctggaagggctggagaaaagattgctgcatggcggtatgaggccttt
gtctcgccaggctgtgaccatcttaattcctcactgcagcgtctaagggctgagccaaac
aaaaccgtcatggattattggccgccgttgacggtaattccttggcgtgggactggtgag
aaaggggatttgggttcccccggtttgcctggagagaaaggagagcaaggattccctggg
gtaccaggtccacctggtcttcctgggtctccagggaccactgtcacaggccctcctgga
ccccctggctttcctggggaaaggggccagaagggagctcaaggtctgcctgggactgcc
atgcctggacagcctggacttgatggactgcctggggctcctggacccccagggactcct
ggcaaaccaggacctcacatcccttctaatggtgagatatgtgaaaagggaccccagggc
ccaccaggatctccaggagacagaggaatcccaggagagcaaggaatgaaaggtgacaag
ggagatacctgcctcaactgtattgaaatgggccttgctggacctccagggcagcctggg
ctaccaggacctccaggccttacaggagctcgtggcttccctgggccgaacggagtgaaa
gggtatgttggtgctactggtcctgtaggctccccaggccttccaggagctccaggtacc
ccgggattgccaggtccaaaaggaaatccagggcacaccctcactttcccagaaatgaag
ggtgacaaaggagacaccggattccctggggctccagggattcctggactgtctggcact
ccaggacaagatggattgcctggtcctcctggcatcaagggaaaagctgtgagttcattc
attgttggtgttatcccgaagattgctagttaa

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