Monodelphis domestica (gray short-tailed opossum): 100025527
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Entry
100025527 CDS
T01031
Symbol
LRBA
Name
(RefSeq) LPS responsive beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100025527 (LRBA)
Membrane trafficking [BR:
mdo04131
]
Endosome - Lysosome transport
Others
Others
100025527 (LRBA)
Endosome - Golgi transport
100025527 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
100025527 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
WDR55
WDR90_beta-prop_4th
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
SUKH_6
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
100025527
NCBI-ProteinID:
XP_016278662
Ensembl:
ENSMODG00000000916
LinkDB
All DBs
Position
5:127122077..127799550
Genome browser
AA seq
2492 aa
AA seq
DB search
MTAVYLFSEALNAAQIFAVYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAFT
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPLF
AQLDYKQYSSDQTDTSVCSTLLAFIMELLKNSIAMQEQMLSSKGFLVIGYSLEKSSKCHV
SRAVLELCLAFSKYLSSLHNGVPLLKQLCDHILLNPAIWIHTPAKVQLTLYTYLSTEFIG
TVNIYNAIRRVGTVLLIMHTLKYYYWTVNPQDRSGISPKGLDGPRPNQKEILSLRALLLM
FIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPSSMIPAFDQRNG
LRVIYKLLASTSEGIRVQALKALGYFLKHLPSKRKAEVMLGHGLFSLLAERLMLQTSFIT
MTTYNVLFEILIEQICTQVIHKQHPDPDSSVKIQNPQVLKVIATLLRNSPQCPESMEVRR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSEEQKITEMVYAIFRILLYH
AVKYEWGGWRVWVDTLSITHSKVTFEMHKESLANIFREYQGKVGEEIGPGPSSPVQSISG
VSKDVEFSESDPQLEVKEDSSSIHITSNDDGESVRDIVESNMDRQNHILSNKERKAAGEK
GLNEVVLEGILTKETECKDNLQITPGGEEATSVSSDSAEVSGKDTIIGVLSIPSGEDTSD
VPEILDKSIVEDDEEDYVELKVESSPPVEHQEENKPSLKLSEESMLPLELQQNEFSSVVS
DASEKADSEILVEALPVSDASIEDTSSKIIAQSEINQMLEEGKKMTDHADETRAVNNGHT
NNLETNIASEKKIAKLDVSNVATDTERLELKASTSTETSQPHRPNPEISRQQEQIGQETP
QAITPSNEQRRDSRSTMFRIPEFKWSQMHQRLLTDLLFSIETDIQMWRSHSTKTVMDFVN
SSDNVIFVHNTIHLISQVMDNMVMSCGGILPLLSAATSATHELENIEPTQGLTIETSVTF
LQRLISLVDVLIFASSLGFTEIEAEKNMSSGGILRQCLRLVCAVAVRNCLECQQHSQLIP
SRDPAKGHRMMHSLTTTGKSAAKSPVDIVTGGISPVRDLDRLLQDMDINRLRAVVFRDIE
DSKQAQFLALAVVYFVSVLMVSKYRDILEPQNEMRQPQSDESLKESGNESGDVTSTDLEF
TTEASSPLPPTTVEDLANVASVGKRNYGGGEESASAVGSNMAEAIPAGSQCVSAGPDAIS
EVLCTLSLEVNKSQDARKNDGPRELDTKTAPSVPATKNVNVKDILRSLVNMPADGVTVDP
AFLPPACLGTLSDLSVEQPVQFRSFDRSVIVATKKPTLSPSPANPNMPTNAVSVVSSVDS
NQASDLVGASPGSGSSNAKLPAVPVVSSVPEDSASNMSITERLEHALEKAAPLLREIFVD
FAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIEL
VNEGRLLSQTMKDHLVRVANEAEFILSRQRAENIHRHAEFESLCAQYSADKREEEKMCDH
LIRAAKYRDHVTATQLIQKIINILTDKHGAWGNSAPSRPREFWRLDYWEDDLRRRRRFVR
NPLGSTHPEATLKTAVEHGQCKNCFLPIAAASDEDILTKGKQSIKSQALGNQNSESEILL
DGDDDTLSSVEEKDLENLTGPVSLSTPAQLVAPSVVVKGTLSITSSELYFEVDEEESNFK
KIDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQNTALEIFMANRVAVMFNFPDPATVKKV
VNCLPRVGIGTSFGLPQTRRISLANPRQLFKASSMTQRWQHREISNFEYLMFLNTVAGRT
YNDLNQYPVFPWVLTNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFAERYESWEDDQV
PKFHYGTHYSTASFVLAWLLRMEPFTTYFLNLQGGKFDHADRTFSSISRAWRNSQRDTSD
IKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWAKSSEEFVRINRLALESEFV
SCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYEGAVNLSSITDPILREAVEAQIRSFGQ
TPSQLLIEPHPPRSSAMQVYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVTHVAANTQPGL
ATPAVITVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGMHRRQITDLLD
QSIQVHSQCFVITSDNRFILVCGFWDKSFRVYSTDTGKLIQVVFGHWDVVTCLARSESYI
GGNCYILSGSRDATLLLWYWNGKSNGIGDNPGSEMTTPRVILTGHDYEITCATVCAELGL
VISGSKEGPCLIHSMNGDLLRTLEGPENCLRPKLIQASREGHCVIYYENGTFCVFSVNGK
LQATMETDDNIRAIQLSRDGQYLLTGGDNGVVMVWQVCDLRQLFAYPGCDAGIRSMALSY
DQRCVMTGMASGSIVVFHNDFNRWHHEYQTRY
NT seq
7479 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgtttaccttttcagtgaagctctcaatgctgctcagatttttgctgtctat
caactagggttgggatacaagggaacatttaaattcaaagcagaaagtgacctcttcctt
gctgaacatcacaaacttttgctttatgatggtaaactctccagtgctattgcattcaca
tacaatccgcgggccactgatgcccagctttgtcttgaatcatcacccaaggataaccct
tctatatttgttcattcacctcatgctcttatgctccaggatgtgaaagcagttttgact
cattctatccaaagcgctatgcactcaattggaggggtgcaggtgcttttccctctcttt
gcacagctggactataaacagtattcatctgaccagactgatacatctgtttgctctacc
ctgttggcttttatcatggagttgttgaaaaactccattgctatgcaagaacagatgctt
tcctctaagggcttcctggtcataggatacagccttgaaaagtcttccaaatgccatgtc
agtagagctgtgcttgaactttgtctggcattttcaaaatacctgagtagtctgcataat
ggagtgccacttctgaaacaattgtgtgatcatatccttctcaatcctgcaatatggatt
cataccccagccaaggttcagttaacactgtatacttatctatccacggagttcattggt
acagttaacatatataatgcaattcggagagttggaacagtgcttctcatcatgcataca
ctgaaatactattactggacagtcaatcctcaggatcgtagtggcatttctccaaaaggc
ctagatggacctcgacctaatcaaaaggaaattctttctctccgggccctattattgatg
ttcattaagcaattagtgatgaaggattctggggtgaaagaagatgaactacaagccatt
ctcaattatctacttactatgcatgaggatgacaatctaatggatgtcctacagttgttg
gttgcattaatgtcagaacatcctagctctatgattcctgcctttgaccagaggaatggt
ttacgagtgatctacaaacttttggcatccacaagtgaagggatcagagtacaggctctc
aaagcattgggttactttttgaaacatctgccttcaaaaaggaaagctgaagttatgctt
ggacatggtttgttctcattgctggctgaaagactgatgcttcaaacaagttttatcacc
atgaccacatacaatgttctcttcgagattttgatagaacagatttgcactcaggtaata
cataaacaacatccagatccagattcttcagtgaagatacaaaatcctcaggttctaaaa
gtaattgctactctgctgcgaaattctccccagtgtccagagagtatggaggttcgaaga
gcctttctttctgacatgattaaactttttaataacagcagagaaaaccgaaggagcttg
ctgcagtgctctgtgtggcaggaatggatgctttcactttgctattttaatcccaagaat
tcagaagagcagaagataacagagatggtatatgctatttttcgaattctactttaccat
gcagtcaaatatgagtggggtggctggcgtgtatgggtggataccctgtcaattacacat
tcaaaggttacttttgaaatgcacaaagaaagcctagctaacatattcagagaataccaa
gggaaagttggtgaagaaataggaccaggtccatcaagtccagtccaatcaatctctggt
gttagcaaggatgttgaattttcagaaagtgatccacaattagaagtaaaggaagattct
tcttctattcatattaccagtaatgatgatggagagtcagttagagacattgtagaatct
aatatggatcggcaaaatcacatactatctaataaagaaagaaaagctgcaggagaaaaa
ggactcaatgaagtagttttggaaggaatactgacaaaggaaacagaatgtaaagacaat
ttacaaataactcctgggggagaagaagccacgagtgtctcttctgattctgctgaagta
agtgggaaagatactataattggtgtcctaagtattccttcaggagaagatacttcagat
gttccagaaattttggacaagtcaatagtggaagatgatgaagaggattatgttgaactt
aaagtagaaagtagtccccctgttgaacaccaagaggaaaacaaaccatctcttaaactc
tcagaagaaagtatgttacctcttgaacttcagcaaaatgagttctcatctgttgtatct
gatgccagtgaaaaagctgattctgaaatattggttgaggcattgcctgtttcagatgcc
tcgatagaagatacttcttccaaaatcatagctcaatcagaaatcaaccagatgttagag
gaaggaaagaaaatgactgaccatgctgatgaaactagagcagttaataacggacatacc
aacaatttagaaactaatattgcttctgagaagaagattgccaagttggatgtttctaat
gtagctacagatactgagagactggaattaaaggctagtacaagcacagaaacttctcaa
cctcatcgacccaatcctgagatatcaagacaacaggaacaaataggacaagagacaccc
caagctataaccccaagcaatgaacaaagaagagattccagatcaactatgtttcgtatt
ccggaattcaagtggtcccaaatgcaccagcgtttactcacagacttgttgttttccata
gaaacagatatacagatgtggagaagccattcaacaaagacagttatggacttcgtgaat
agtagcgataatgtcatctttgtacataacacaattcatctcatctctcaagtaatggac
aatatggtcatgtcttgtggaggtatattgccattgctttcagctgctacatctgcaact
catgagttggaaaatattgaaccaactcaaggccttacaatagagacctctgtgacattt
ttgcagaggttaattagccttgttgatgtgttaatttttgcaagttctcttggctttacg
gaaattgaagctgagaaaaatatgtcatctggaggaattttgagacagtgcctcaggttg
gtttgtgcggtggcagtaagaaattgtttagaatgtcagcagcattcacaactaatacct
agtagagacccagcaaaaggacatagaatgatgcatagtttgacaaccactggaaagtct
gcagcaaagagtccagtggatattgtaactggtggcatatctccagtgagagaccttgat
agacttctgcaagacatggatattaaccggcttagggcagttgtcttcagagacatagag
gatagcaaacaagctcaattcttggctttggctgtggtatactttgtctctgttctcatg
gtgtccaagtacagagacattctggaacctcagaatgaaatgcggcaacctcagagtgat
gaatctttgaaagagtctggcaatgaaagtggtgatgtaacatcaactgatttagaattc
acaacagaagccagcagtccattacctccaacaacagtggaagaccttgcaaatgtggca
tctgttggaaagagaaattatggaggtggggaagaatcagcttcagctgttggaagtaac
atggccgaggctattcctgcagggtctcagtgtgttagtgcgggtcctgatgccatcagt
gaagtactgtgcacactctctttagaagtgaataaatctcaggatgccagaaaaaatgat
ggacccagagagttagataccaagactgcaccctctgtcccagctacaaaaaatgttaat
gtgaaagacattctcagaagcttggttaacatgccagcagatggagtaactgtggatcct
gcctttcttccaccagcctgccttggcactcttagtgatctttctgttgagcaacctgtg
cagttccgatcctttgacaggagtgtcattgttgcaaccaagaaacctaccctttcacct
tctcctgctaatccaaatatgcctaccaatgctgttagtgtggtttcttcagttgactct
aatcaggcctcagacttagtgggagcatctcctggtagtggatcatctaatgcaaaatta
cctgctgtcccagtagtttcttcagttccagaagactctgcttcaaacatgagtattaca
gagagacttgaacatgctctggaaaaagctgctcctcttcttcgagaaatatttgtggat
tttgctccttttctttctcgtacacttttgggtagccatggacaagagttgcttatagaa
ggaacaagtctagtctgcatgaagtctagtagctctgttgttgaactggtcatgctcctc
tgttctcaggaatggcaaaactcgatccagaagaatgcaggccttgcttttattgaactt
gtcaatgaaggaaggttattgagccaaaccatgaaagatcacctagtaagagtcgcaaat
gaagctgaattcattctgagcagacagagagcagagaatattcacagacatgcagaattt
gagtcattgtgtgctcagtattctgccgataaacgagaggaggaaaagatgtgtgatcac
ttaataagagcagcaaagtaccgggaccatgtgacagcgactcagctaatccagaaaatt
atcaatatactgacggacaaacatggagcctggggaaattctgcaccaagtcgtcctcgt
gagttctggcgccttgactactgggaagatgacttgcggcgccggcgacgatttgtgcgt
aaccctcttggatcgacacatcctgaagcgacactaaaaacagccgtggaacatggtcag
tgtaaaaactgcttcttgcccatagcagcagcttcagatgaagatatccttactaaagga
aaacagtccatcaagagtcaggctttaggaaatcagaactcagaaagtgagattctcctg
gacggcgatgatgataccctgtcatctgtggaggagaaagacttagagaatcttactggt
cctgtcagcttgagcacaccagctcaacttgtggccccttctgtggtggtgaagggcact
ctttccatcacttcctctgaactctattttgaagtggatgaagaagagtcaaacttcaag
aaaattgaccccaagatcctggcatatacagaaggactgcatggaaaatggctgttcaca
gaaattcgatcaatattttcccggcgctatcttctacagaatacggcactggagatcttc
atggcaaatagagttgctgtcatgttcaactttccagaccctgctacagtaaagaaagtg
gtcaattgtctacctcgtgttggcattggaactagttttgggttgcctcaaaccagacgc
atttcattagcaaacccacgtcagctttttaaggcttccagtatgactcaacgatggcag
caccgggagatttctaattttgagtatttaatgtttcttaacactgttgcaggacgtacc
tataatgacttgaatcagtatcctgtattcccttgggtgttaactaactatgaatcagaa
gagcttgacctaacactgccaagcaacttcagggatttgtccaagcccataggagctctg
aatcccaaaagagcagcattctttgcagagcgttatgaatcatgggaagatgatcaagtt
ccaaagttccactatggcactcattactcaactgcaagctttgtgcttgcatggttgcta
agaatggagccttttacaacttatttcctaaatttgcaaggtggaaaatttgatcatgca
gatagaaccttttcatctatttcaagagcatggcgtaatagtcaacgtgacacatctgat
atcaaggagttgatccctgaattttattatcttcctgagatgtttgtcaacttcaataat
tataatcttggagtgatggatgatgggacagtggtatctgatgttgaacttccaccatgg
gctaaaagctcagaagaatttgttcgcataaacagattggccttagagagtgaatttgtt
tcctgccagcttcaccagtggatcgatctcatttttggctataaacagcaagggccagag
gcagtccgagctcttaatgtattctattacctgacctatgagggagctgtcaatctgagt
tcaataacagatcctatattgagagaggctgttgaagctcaaatccgaagttttggacaa
actccttcccagctcctcatagagccacatcctcccagaagttctgccatgcaggtgtat
ctcctcctgcagagtccattgatgttcacagaccaagctcagcaggatgttatcatggtc
ctaaagtttccatccaactcccctgtcactcatgtagcagccaacacccagcctggtttg
gcaacacctgctgtgatcacagtcactgctaacaggctatttgctgtgaacaagtggcac
aaccttcctgctcatcaaggtgctgtacaggaccagccataccagctgccagtggaaatc
gatcctctcatagctagcaatactggaatgcacaggaggcaaatcactgaccttttagac
caaagtattcaagtccactcccagtgctttgtcatcacttctgataaccgctttattctt
gtctgtggcttctgggataagagtttccgagtctattctacagacacaggaaaattgata
caagtggtatttggacactgggatgttgtcacttgccttgcccgatccgagtcatacatt
gggggaaattgttacattctctctgggtctcgagatgcaacactccttctctggtattgg
aatgggaaaagcaatggaattggagataacccaggcagtgagatgaccactccccgagtt
attttgactggtcacgactatgagatcacttgtgctacagtttgtgctgaacttggccta
gtaataagtggttctaaagaaggaccgtgcctcatacattctatgaatggagacctatta
agaaccctggagggtcctgaaaactgcttgagaccaaaactgatacaggcttcaagagag
ggtcactgtgtcatatactacgaaaatggcaccttctgtgtattcagtgtgaacggaaaa
cttcaggccaccatggagacagatgacaatattagggcgatccagctaagccgggatggc
cagtatttgctcacaggaggagataatggagttgtcatggtgtggcaggtgtgcgacctc
agacagctctttgcttaccccggctgtgatgctggaattcggtccatggcattgtcttac
gatcagaggtgtgtcatgactggcatggcgtctggaagcatagtggttttccacaatgac
tttaaccgatggcatcatgaataccaaacccgatactga
DBGET
integrated database retrieval system
