Monodelphis domestica (gray short-tailed opossum): 100025589
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Entry
100025589 CDS
T01031
Symbol
CIITA
Name
(RefSeq) class II major histocompatibility complex transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04612
Antigen processing and presentation
mdo05145
Toxoplasmosis
mdo05152
Tuberculosis
mdo05164
Influenza A
mdo05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
100025589 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100025589 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
100025589 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100025589 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
100025589 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mdo01001
]
100025589 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mdo04054
]
100025589 (CIITA)
Enzymes [BR:
mdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
100025589 (CIITA)
Protein kinases [BR:
mdo01001
]
Serine/threonine kinases: Other
TAF1 family
100025589 (CIITA)
Pattern recognition receptors [BR:
mdo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100025589 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
NLRC4_HD2
LRR_8
LRR_9
NB-ARC
Motif
Other DBs
NCBI-GeneID:
100025589
NCBI-ProteinID:
XP_016279485
Ensembl:
ENSMODG00000005234
LinkDB
All DBs
Position
6:complement(110570415..110684612)
Genome browser
AA seq
1213 aa
AA seq
DB search
MDQFQAILPQVRALLSSAWPAQVRRFLDGLLEKDLLSKEYHQALLRESDGEALARKVSLS
LLEKWDLCIGTLIQCVGCSGNKLQTPGMDGVSLSKSRASGQCTAMESGPLSEGSYLGLLQ
SEIDPLQLFHFYDQPLPGEEEIEFTSDPDTDTINCDQVDRLWNAIENEGAGEAYDRIAAL
AEYMFSDPHPETEGIFGNIDPDEVVNENIDALAEVPQKSQKSQKRLFMDKPEPQSDTWET
KRRKPETSPAIPLVTNNLVTASSNDNLVLKDSLSPLPGQVAKPSLPSMKEAFLVPMSSAS
PVFTCLNFNGGPIQLIPTFPTLPQGVFQFTVENGVSNIFFYPASSGDDAIIQSLPVSPDR
PGSTSPLVPSAADMPNMPEASALTLQSRKTDVHLEQSLEQLATIVVDSNLAPKQPESVEG
FCRALQKAYGDVPKGQSSYYIDIELTRTQVEKNSKYQEKDLAIQDWTERQKARVGWREVF
ARPSGQKGETQVIAVLGKAGLGKSAWTREICRNWAQGQLPQYEFVFHYKCHGLNLPGNDY
CLKDLFFRLCHHSLEESEEVFKYILKHPNHILVILDSFEELEGQDGLLHYLASSSPREPQ
PIKGLLAGLFQRKLLRGCTLLITTRPKGRFIQYLAKVDSLLEVQGFSPEQVEAYFEKYFQ
SSPSDRDEALRLLRTQPYLLSHCYSPAVCLSLCQLCEKVLAAGGPAQLPSTLTGLFVSLF
CSALRAKKKGTSETWPRRCLAGLAELAWERGQRHCRVLREDQFPSKEVKEFTVSGDFMWP
LPTARDPEMVFSTFLLQNFLGALRLALSGEVRHKELPRYIALTPRKKKPYDNWLDRVPHF
LTGLLFQPLSSCLGLLGGDEQVELVCKRKKVLLSYLTRLQPGTLGPGKLLELLHCAHEAA
DRQLWEHVTAGLPSYLSFWGVRLAPPDVHVLGEALKAAGKDFSLDLRSTSIDLHGLRILV
QLGCVTCFRASLSDTVWLWESLQQSGEHELLQSSTKKFTIDPFKVKSMKDVEDLCSLVHI
QSSGNVPTEACDPLPAIRDLKKLEFALGPGLGPQGFPKLVKILAAFSSLQHLDLDTLSEN
KIGDEGVTQLSAIFPELKVLETLNLSQNCITDVGATELAKALPSLATSLVTLSLYNNCIC
DTGAKNIASVLPSMVSLRVLDVQYNKFTDAGAQQLTASLKKCPHIETLAMWNSTIPYGVQ
EHLQHLDSRISLR
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggatcagttccaggccatcctgccccaggtgagggcactgctctctagtgcttggcct
gcccaggtacggagatttctggatggcctgctagaaaaggaccttctctccaaagaatat
caccaggctctgctccgagagtctgatggagaagcactggccaggaaggtttccttgtcc
ctgttggagaagtgggatctgtgcatagggaccctgatccagtgtgtggggtgctctggg
aataagcttcagaccccagggatggatggagtctccttatcgaagagccgagctagcggt
cagtgcacagccatggaatctgggccactgtcagaaggaagctacttggggctgctccaa
agtgagattgaccccctacaacttttccatttttatgaccaacccctgcctggagaagaa
gagattgagttcacttcagatcctgatactgacacaatcaactgtgatcaagtggacagg
ctatggaatgccatagaaaatgagggggcaggagaggcctatgacaggatagctgcattg
gcagaatacatgttctcagacccacatccagagactgaaggtatttttgggaacattgac
ccagatgaagtggtgaacgaaaatatagatgcattggctgaggtgccccagaaatcacag
aaaagtcagaaaagattatttatggataagcctgagcctcagtcagacacttgggagacc
aaacgcagaaaaccagagacatccccggccattcctttggtaaccaacaatttagtgaca
gcatcttccaatgataatttggtcctgaaagactctctgtctcctctcccaggccaagtt
gccaagcccagcctgccctccatgaaagaagcctttctggtgcccatgtcctcagccagt
cctgtttttacttgcctgaatttcaacgggggacctatccaactcatccccacctttccc
actctgccacaaggcgtattccaattcacagtggaaaacggagtctccaacatcttcttt
tacccagcctcatcaggggatgatgccatcatacagagcctcccagtatcacctgacagg
cctggctccaccagtccacttgttccatcagcagcagatatgcccaacatgcctgaggct
tcagctctaactttgcaaagcagaaaaacagatgtacatttagagcagtccctggaacag
cttgcaacaattgtagtagattctaacctagctcccaaacagcctgagtctgtggaaggg
ttctgtcgtgctctacaaaaggcatatggggatgttccaaaaggtcaaagcagctattac
attgacatagaactcacaagaacccaagtggaaaaaaatagcaagtatcaagagaaagac
ctggcaatccaggactggacagagagacagaaggctcgcgtgggctggagagaagtcttt
gctcgccccagtgggcagaaaggggagacacaggtgattgcagtactaggcaaggctggc
ttgggcaaaagtgcctggactcgggagatctgtaggaactgggcccagggccagcttcct
caatatgaatttgtcttccactacaaatgccacggcctgaacttgccagggaatgactat
tgcctgaaagatctgtttttcagactctgccatcactcattggaagagagtgaggaagtc
ttcaaatatattctgaagcacccaaaccacattctggtcattctggactcctttgaggaa
ctagaaggtcaagatggcttgctgcattatctggccagctcctctcctagggagccccag
cccatcaaagggctgctggctggcctcttccaaaggaagctcctgaggggttgcacactg
ctgatcacaaccaggccaaagggaaggtttatccagtacttggccaaagtagacagcctc
ttggaggtgcagggcttctctcctgagcaggtagaggcttactttgaaaaatatttccag
agttcaccatcagacagggatgaagccttgaggctcctccggacccagccctacctgctc
agtcattgctacagccctgctgtgtgcctctccctctgtcagctgtgtgagaaggtcctg
gctgcaggaggtccagcccaactcccctccactctcactgggctctttgtcagcctcttc
tgctcagcactgagagccaagaaaaaagggacatcagaaacctggcccaggaggtgcctg
gcagggttggcagagctggcatgggagcgaggccagagacactgcagggtcctgagagag
gaccagttcccctccaaagaagtgaaggaattcactgtttctggggactttatgtggcca
ttgccaacagcgagggatccagagatggtcttctctacctttctcctacagaacttcctg
ggagctctgaggctggcactgagtggggaagtaagacacaaggagctccccaggtacata
gccctgacccctaggaagaagaaaccctatgacaactggctggaccgggtacctcacttc
ctgactgggcttcttttccaacccctgtcctcctgccttggtctccttggtggggatgag
caggttgagcttgtgtgcaagaggaagaaggtactcttgagctatctgacacggttacag
cctgggacactgggacctgggaagctccttgaactgctgcattgtgcccatgaggcagct
gacagacaactatgggagcatgtaacagctgggctaccctcctacctttccttctgggga
gttcgcctggccccaccagatgtgcatgttttgggagaggccctgaaagcggctggcaaa
gacttctccctggatctcagaagcacctccattgacctgcatgggctacggatccttgtc
caacttggctgtgtcacctgcttcagggcatctctgagtgacacagtgtggctgtgggaa
tcccttcagcaaagtggggaacatgaactactccaaagttccactaagaagttcaccatt
gatcccttcaaagtcaagtccatgaaggatgtggaggacctttgtagcctggtacacatc
caaagctccggaaatgtccctacagaggcatgtgaccctctccctgccatcagagacttg
aagaagcttgagtttgcgcttggcccaggtttgggtccccagggctttccaaaattggtt
aagatccttgcagccttttcctcccttcagcatttggacctggataccctaagtgagaac
aagattggggatgaaggtgtaactcagctctctgccatctttccagagttaaaggtcttg
gaaaccttgaacttgtctcagaattgcatcactgatgtgggagccacagagttggccaag
gctctgccatcactggcaacatcccttgttaccttgagcctatacaacaactgcatctgt
gatactggagccaagaacatcgctagtgtgcttcccagtatggtgtccttgagagtcctg
gatgtccagtacaacaagttcacagatgcaggagcccagcagctcacagccagtctgaag
aaatgtccacatatcgagacactggcgatgtggaactccactattccttatggagttcaa
gaacacctacagcatctagactcccgaataagtttgcggtag
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integrated database retrieval system
