KEGG   Monodelphis domestica (gray short-tailed opossum): 100025637
Entry
100025637         CDS       T01031                                 
Symbol
KATNB1
Name
(RefSeq) katanin regulatory subunit B1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mdo04812]
    100025637 (KATNB1)
Cytoskeleton proteins [BR:mdo04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     100025637 (KATNB1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Katanin_con80 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_RIG_1st Beta-prop_RIG_2nd WD40_RFWD3 RMC1_N Beta-prop_WDR19_1st WDR54 eIF2A Beta-prop_IP5PC_F Beta-prop_NWD2_C Beta-prop_LRRK2 PROPPIN Beta-prop_WDR35_TULP_N VPS8_N Beta-prop_VPS8 F-protein Myc_target_1
Other DBs
NCBI-GeneID: 100025637
NCBI-ProteinID: XP_016283565
Ensembl: ENSMODG00000014037
LinkDB
Position
1:complement(710422632..710444497)
AA seq 663 aa
MATPVVTKTAWKLQEIVAHASNVSSLVLGKGSGRLLATGGDDCRVNLWSVNKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYKGHTQAVRCLRFSPDGKWLASAADDHSVKLWDLTAGK
MMSEFLGHTGPVSVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFN
PDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLTTCNNQLIGVSFAQSNVSSYVV
DLNRVTRSGTVVQDPVQDSRPLAQPTLSGPTIRRGYERPATACSKPQRVKQNSESERRSP
SSEDDRDERESRAEIQNADDYNEIFQPKNNISRTPPQRSEPFPAPPEDDLAIAKEALKPS
QAMDVQLPLPNRGSSDFVPRLPVATSTPMPKAEPAVIPATRNEPIGLKASDFLPAVKMPN
QSEMVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKARRSPWTPGPSWEPLN
FFRQGPRAGHSPSPRRSLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPL
ITDILAAPPSVGVDITREERLHKCRLCYKQLKNISHLIKNKSGLSGRHGSAFRELHLLMA
PLD
NT seq 1992 nt   +upstreamnt  +downstreamnt
atggcaacccctgttgttaccaagacagcatggaagctacaggaaatcgtggcccatgcc
agcaatgtgtcttctctggtgttgggcaaaggctcagggcggctcttggcaacaggagga
gatgattgtcgggtcaacctgtggtcagtgaacaagcccaattgcattatgagcttaact
ggccacacatcccctgtagagagtgttcgactcaacacccccgaggagctcatcgtggct
ggatcccagtcaggctccatccgcgtttgggacctggaagctgccaaaattcttcgtact
ttaatgggacacaaagccaacatctgcagcctggacttccatccctatggggaatttgtg
gcctctgggtctcaggatacaaatatcaagctctgggacatacggagaaaaggctgtgta
ttccggtataagggccatactcaagctgtaagatgtcttcggtttagccctgatgggaag
tggttagcgtccgctgcagatgaccacagcgtaaagctttgggatctgaccgctgggaag
atgatgtctgagttcttaggacacacggggcctgtcagtgtggtggagtttcaccctaat
gagtacctcctggcttctggcagctctgacaggacaatccgcttctgggatctggagaag
ttccaagtggtcagctgcatcgaaggggagcctgggcctgtcaggagtatcctgttcaac
cctgatggctgctgcctatacagtgggtgtcaagactctcttcgagtgtacggctgggag
cctgagcgctgcttcgatgtggtcctggtgaactggggcaaggtggccgacctgaccacc
tgcaacaaccagctgatcggggtttcctttgcccaaagcaatgtttcctcttatgtggtg
gatctgaaccgggtcacgaggtctgggacggttgtgcaggacccggtacaggacagcagg
cctctggctcagcctacactctctggtcccaccatccgccgaggctacgagaggccggcc
acagcctgtagcaagccccagagggtaaagcagaactctgagagtgagaggcgcagcccc
agcagcgaggatgaccgggatgagcgcgagtcccgagccgagatccagaacgctgatgac
tacaacgagatctttcagcctaagaacaacatcagtcggaccccaccccagaggagtgag
ccattccccgccccccctgaggacgacttggccatagcaaaggaggcgctgaagcccagc
caggccatggacgtccagctcccgctgccaaacagaggaagttctgactttgtgcccagg
cttcctgtcgccacctccaccccgatgcccaaagccgagcctgccgtcatccccgccacc
agaaatgagcccattggactcaaagcctccgacttcctacctgctgtgaagatgcccaac
caatcagagatggtggatgaagacgccatgtctcagatccgaaagggccacgataccatg
tgtgtggtgctgaccagccgtcacaagaacctggatacggtgcgggccgtctggaccaca
ggggacatcaaggcaaggagaagcccctggacacccggaccctcttgggagcccttaaac
tttttccggcaggggcccagagccggccactctccctctccccgcaggtctctctggaag
ctggacctctgtaccactgtcctcccacagatcgagaagctgcttcagagcaaatatgag
agctatgtgcagacgggctgcacctccttaaagctgatcctgcagcgatttctgcctctg
atcaccgacatcctagcagcacccccttctgtgggggtggacatcacccgggaggagaga
ctccacaagtgcaggctgtgctataagcagctgaagaacatcagccacctcatcaagaac
aagtccggcctcagcggccgccacggcagtgccttccgggagctgcacctgctcatggcc
cccttggactga

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