Monodelphis domestica (gray short-tailed opossum): 100025666
Help
Entry
100025666 CDS
T01031
Symbol
ATXN1
Name
(RefSeq) ataxin 1
KO
K23616
ataxin-1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04330
Notch signaling pathway
mdo05017
Spinocerebellar ataxia
mdo05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100025666 (ATXN1)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100025666 (ATXN1)
05022 Pathways of neurodegeneration - multiple diseases
100025666 (ATXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATXN-1_C
AXH
PGC7_Stella
Motif
Other DBs
NCBI-GeneID:
100025666
NCBI-ProteinID:
XP_001376526
Ensembl:
ENSMODG00000010827
LinkDB
All DBs
Position
3:323448617..323992359
Genome browser
AA seq
808 aa
AA seq
DB search
MKSNQERSNECLPPKKREIPATSRPSEEKPVVVPNDNHRAESLTWLPSTQSGQGNMGGRP
GPGGTSTADLGLQQGIGLHKSLSTGMDYSPPSAPRSVPATTTLPAVYPPPQSGTPVSPVQ
YTHLPHTFQFIGSSQYSGPYAGFIPSQLISPTANPATSGVASAAVATTPSQRSQLEAYST
LLANMGSLSQQPGHKVEQPQHLIRTPGLITAGSPPPTQQNQYVHISSSPQSAGRTMSPPA
IPVHLHPHQTMIPHTLTLGPSSQVVVQYTDSGGHFVPRESTKKTESSRLQQAIQAKEMLN
GEMEKSRRYGVPSSADLGLVKASAKTASHHYETRHVVVHSSPTDYSTRDSSGARTSVMVL
PNSNTPTTDMEVQQVTHREASPSTLNDKSSLHLGKPSHRSYALSPQQALGPEGVKATVAT
LSPHTVIQTTHSASDPLPVGLPATAFYAGTQPPVIGYLSSQQQAISYAGNLPQHLVIPGT
QPLLIPVGGADMEPSGVAPAIVTSSPQFAAVPHTFVTTTIPKSENFSAESLATQAAYPAM
VQAQIHLPVVQSIASSTAVPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISND
LKIDSSTVERIEDSPTPGIAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQ
LFDLPCSKLSVGDVCISLTLKNLKNGSVKKGQPMDSASILLKHSKNDSLVGSRHRYAEQE
NGINQGSSQMLAENGELKFPDKIGLPAAPLLTKTEPSKPVATRKRRWSAPETRKLEKSDE
EPPLTLPKPSFIPQEVKICIEGRSNVGK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaagaacggagcaacgaatgcttgcctcccaaaaaacgtgagattcct
gccactagccggccatcggaggagaagccagtggtcgtgccaaacgacaaccacagggcc
gagagcttaacatggctccccagcactcagagtggacaaggcaacatgggcgggaggcct
ggtccgggggggacctcaacagccgatcttggtttacagcagggaataggtttacacaaa
tcactgtccacagggatggattattctccgcccagtgcccccaggtctgttccagccact
accacgctccctgcggtgtaccctcccccgcagtcagggaccccagtgtcccccgtgcag
tacacacacttgccgcacactttccagttcattgggtcctcccagtacagtgggccctat
gctggcttcatcccctcccagctgatctcccctacagccaatcctgccaccagtggagtg
gcctctgccgctgtggccaccactccatcccagcgctctcaactggaggcttattccact
ctgctagccaacatgggcagcttgagccagcagccagggcacaaggttgagcagccgcag
catctgatcaggactccagggcttatcacggcagggtccccaccacccacacagcagaac
caatacgtccacatttccagctctccccaaagcgctgggcgtaccatgtcccctccggcc
atcccagtccacctgcatccccatcagacgatgatcccccacacactcacgctggggcct
tcctcccaggtggtggtgcaatacacagactctggtggtcattttgttccccgggaatcc
actaagaagaccgagagcagcaggctacaacaggccatccaggccaaggagatgctgaat
ggtgagatggagaaaagccggaggtacggcgtcccctcctctgcagacctgggcttagtg
aaggcaagcgcaaagacggcctctcaccactatgaaaccaggcacgtcgtggtccactcg
agccccactgactacagcacccgagattcctcgggggcccggacctccgtcatggtcctg
cccaacagcaacacccccaccacagacatggaagtccagcaggtcacacaccgagaagcc
tccccatccaccctcaatgacaagagcagcctccatttagggaagcccagccaccggtct
tatgctctgtccccgcagcaggctctgggtcccgagggtgtgaaggccacagtggccaca
ctgtcaccacacaccgtcatccagaccacccacagcgcttcggaccccctccccgttgga
cttccagccacggccttctatgcagggactcagccaccggtcatcggctacttgagcagc
caacagcaagcaatcagttatgccggcaacctgccacagcatctggtgatccccgggacc
cagcctctgctcatccctgtggggggcgctgacatggagccatctggggtagcccctgcg
atcgttacttcatctccacaatttgcagcagtgcctcatacatttgtcactaccaccatt
cccaagagcgagaacttcagcgccgagtccctggccactcaggcagcctacccagccatg
gtgcaggcccagatccacctccctgtggtccagtccattgcatcatccacagctgttccc
ccaacactgcccccttacttcatgaaagggtcaatcatccagttggccaacggagagctg
aagaaggttgaggacttgaaaacagaagactttatccagagtgctgagattagcaatgac
ctgaaaatagactccagcaccgtagagaggattgaagatagccctaccccaggcattgca
gtaatccagtttgcagttggagaacatcgagcacaggtcagcgttgaagtcttggtagaa
tatcctttttttgtatttggacaaggctggtcatcatgctgccccgagagaaccagccag
ctctttgatttgccatgttccaaactctcagtcggggatgtctgcatctcgctcaccctc
aaaaacctgaagaacggctctgttaaaaagggccagcccatggattcagccagcatcttg
ctgaagcactcaaagaatgacagtctagtaggaagtagacacaggtatgccgagcaggaa
aatgggattaatcagggaagttcacagatgctagcagaaaacggtgaactaaagtttcca
gacaaaataggattgcctgcagcacccttgctcaccaaaacagaacccagcaagcccgtg
gcaacaaggaagaggaggtggtctgcacccgaaacacggaaactagagaaatcagatgag
gagccgcctttgactcttcccaagccttcttttattcctcaggaggttaagatttgcatt
gaaggtcgatctaatgtaggcaagtaa
DBGET
integrated database retrieval system
