Monodelphis domestica (gray short-tailed opossum): 100026021
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Entry
100026021 CDS
T01031
Symbol
GABPB1, GABPAP
Name
(RefSeq) GA binding protein transcription factor beta subunit 1
KO
K09454
GA-binding protein transcription factor, beta
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100026021 (GABPB1)
03029 Mitochondrial biogenesis [BR:
mdo03029
]
100026021 (GABPB1)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
100026021 (GABPB1)
Mitochondrial biogenesis [BR:
mdo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
100026021 (GABPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
ANK_LRRK2
CCDC84
LAMTOR5
Motif
Other DBs
NCBI-GeneID:
100026021
NCBI-ProteinID:
XP_001369969
Ensembl:
ENSMODG00000002253
LinkDB
All DBs
Position
1:complement(180978634..181050377)
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AA seq
395 aa
AA seq
DB search
MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
ELLIKYGADVHTQSKFCKTALDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
MPDGQQVLTVPATDIAEETVISEEPPVKRQCIEIIENRVESAEIEEREALQKQLDEANRE
AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtccctggtagatttgggaaagaagcttttagaagcagcacgagcaggtcaggatgat
gaagttcggattttgatggcaaatggagcaccttttactacagattggttgggtacatct
ccacttcatctagctgcacaatatgggcattattcaaccacagaagtattactccgagct
ggtgtaagccgagatgccagaactaaagtggaccgaactccattacacatggcagcatct
gaaggccatgcaagcatagtagaagttttacttaagcatggcgctgatgtcaatgcaaaa
gacatgctaaaaatgacagcactacactgggctacagaacataatcatcaagaggtggtt
gaacttttaattaaatatggtgctgatgtccacacacaaagtaaattttgtaagactgct
ttggatatttcaatagacaatggaaatgaagatttggcagaaatattacagattgcaatg
cagaaccaaataaatacaaaccctgagagccctgacactgtgacgatccatgctgcaaca
ccacagtttatcattggacctggaggggtggtgaacctaacaggtctggtatcctcagaa
aattcatccaaggcaacagatgaaactggagtatctgctgttcagtttggaaactcatct
acgtcagtattagctacattagctgctttagctgaagcttctgctccattgtccaattct
tcagaaaccccagtagtggctactgaggaggtggtgacagcagaatcagtagatggtgca
atccaacaagttgttagctctgggggtcagcaagttattacaatagttacagatggaatt
caacttggtaatttgcactctattccaaccagtggaataggccagcccatcattgtaacc
atgccagatggacaacaagtattaacagtaccagcaacagatatagctgaagaaactgtt
ataagtgaagaaccaccagtcaagagacaatgtattgaaattatagaaaatcgggtggaa
tctgcagaaatagaagagagggaagcacttcagaaacagctggatgaggcaaatcgagaa
gcacaaaaatataggcagcaacttctaaagaaagaacaggaagcagaagcctataggcag
aaattagaggccatgacccgtctccagactaacaaagaagccgtgtaa
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