Monodelphis domestica (gray short-tailed opossum): 100026215
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Entry
100026215 CDS
T01031
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo02010
ABC transporters
mdo04145
Phagosome
mdo04612
Antigen processing and presentation
mdo05163
Human cytomegalovirus infection
mdo05168
Herpes simplex virus 1 infection
mdo05169
Epstein-Barr virus infection
mdo05170
Human immunodeficiency virus 1 infection
mdo05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100026215
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100026215
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
100026215
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100026215
05168 Herpes simplex virus 1 infection
100026215
05163 Human cytomegalovirus infection
100026215
05169 Epstein-Barr virus infection
100026215
09163 Immune disease
05340 Primary immunodeficiency
100026215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdo02000
]
100026215
Enzymes [BR:
mdo01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
100026215
Transporters [BR:
mdo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
100026215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_29
AAA_23
AAA_15
ABC_ATPase
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
100026215
NCBI-ProteinID:
XP_016286467
Ensembl:
ENSMODG00000014539
LinkDB
All DBs
Position
2:complement(269578251..269588069)
Genome browser
AA seq
714 aa
AA seq
DB search
MPLELAGASMQLLALRPWAPLLLTDLMLLWLFQPLEGVVFFPGLSGLWLEGVFRMGVLWG
VLSLLGELGKIRELLPVWCLSTPLFLSLRTLVPEALSAPPVLLASAPWAWLLVTYGGSGL
GWAVWKMLSPSEAPSSAQEKEQGQENKAMMGRLLRLSWPDLPFLAAAFFFLTTAVIGEMF
IPHYTGRVIDILGQDFDPDAFVTAIFFMCLFSLGSSFSSGCRGGLFTIILSRLKLRIRHV
LFSSLLCQDLSFFQETKTGELSSRLNSDTILMSRWLPLNANVFIRSLVKIIGLYSFMVSL
SPRLTLFSLLEVPLLVAAEKVYNARHQAMLCQIQDSVAEARQVVREAVGSLRTVRSFGAE
ENEAQRYEKALEHGRKLRWRQNREYGIYQVIKRGLQLAMWALILDYGLRQILAGKLTRGG
LLSFLLYQEHVGRLLKILVCMYGDMVSKVGAAKKVFQYLDRVPQMPPPGILAPSVLHGLV
EFRDVSFAYPSNPKYFVLKGVTFTLHPGKVTALVGPNGAGKSSVAALLQNLYQPTRGQLL
LDGEPLPQYQHQYLHSQVSVVEQEPVLFSGSVRDNIVYGLESCKDDEVMAAVRVAQADGF
IANMEHGLDTAVGEKGSQLSAGQKQRLAIARALVRNPRVLILDEATSALDVECEQALQKC
MLQGHRTVLVIAHRLQTVQAADHILVLEQGKLVEQGTHTQLMAQRGLYHHLVQQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttgagctggccggtgccagcatgcagctccttgccctgaggccttgggctccc
cttcttctgactgacctgatgttactgtggctattccagccactggaaggagttgttttc
tttccagggctctctgggctctggctggagggggtttttcggatgggagtactatggggg
gttctgagtttattgggggagcttgggaagatcagggaactactgcctgtctggtgtctg
agcaccccccttttcctgtctctgaggactctggttccagaggccctgagtgccccacct
gtgctcctagcctcagccccttgggcctggttgctggtgacttatggtgggtcaggcctg
ggctgggctgtgtggaagatgctgagcccctctgaagccccttcctcagcacaggagaag
gagcaaggccaggagaacaaagccatgatggggaggctgctgagactgtcctggcctgac
ttgcccttccttgctgctgctttcttcttcttgactacggctgtcataggtgagatgttc
atcccccactatactggccgagtgattgacatcctgggccaggactttgaccctgatgct
tttgtcactgccatcttcttcatgtgcctcttctcccttggaagttcattttcttcaggc
tgtcgaggaggcctcttcaccatcatcctctcccgactcaaactgcgcattcggcatgtg
ctcttttcctctcttttatgccaagatctcagcttcttccaggagaccaagacaggagag
ttaagctcacgcctgaactctgacaccatcctgatgagtcgctggctccctctcaatgcc
aatgtgttcattcggagcttggtgaagatcatagggctatacagcttcatggtcagcctc
tcacctaggcttaccctcttctctttgcttgaggtacccctcttggttgctgctgagaag
gtctacaatgctcgacatcaggccatgctctgtcaaattcaagattcagtggcagaggct
agacaggtggtgcgggaggctgtgggaagtttaagaactgtacgaagttttggggcagag
gagaatgaggcccagcgctatgagaaagctctagaacatggccggaaactacggtggcgc
cagaacagagaatatggcatttatcaagtcatcaagcggggacttcaactagcaatgtgg
gcattgatattggactatgggctgaggcagatccttgcaggaaagctcaccaggggtggc
ctcctctcctttctgctctatcaagagcatgttgggagacttctgaagatcctggtgtgc
atgtatggagacatggtgagcaaagttggagctgcaaagaaagtattccaatacctagac
cgtgtaccacagatgcccccacctggaatactggctccttctgttttgcatggccttgtg
gaatttcgagatgtctcttttgcctatccaagcaaccccaaatactttgttctcaaggga
gtgacattcactttgcatcctgggaaggtgacagccttagtaggccccaatggggctggg
aagagctcagtggctgcactgctgcagaatctctaccagcccacaagaggccagctgctg
ctggatggggagcccctgccccagtaccagcaccagtacctgcactcacaggtatctgtg
gttgagcaggagcctgtactgttctcagggtcagtgagggacaacattgtctatgggctg
gagagctgcaaggatgatgaagtgatggctgctgtccgggtagcccaggctgatggattt
attgctaatatggagcatggactggacacagctgttggagagaaggggagtcagctgtca
gcaggacaaaagcagcgtctggccattgctcgggctctggtgcggaatccccgagtcctc
atcctagacgaggccaccagtgcgctggatgtagaatgtgaacaggcgcttcaaaagtgt
atgctgcaagggcatcggacagtgctggtgattgcacatcgcctgcagacagtgcaggct
gctgaccacatcctggtgctggagcaagggaagctggtggagcaggggactcacactcag
ctcatggcccagagaggcctctatcaccacctggtacagcagtag
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integrated database retrieval system
