Monodelphis domestica (gray short-tailed opossum): 100026301
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Entry
100026301 CDS
T01031
Symbol
EIF4A3
Name
(RefSeq) eukaryotic translation initiation factor 4A3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03013
Nucleocytoplasmic transport
mdo03015
mRNA surveillance pathway
mdo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100026301 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
100026301 (EIF4A3)
03015 mRNA surveillance pathway
100026301 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100026301 (EIF4A3)
03041 Spliceosome [BR:
mdo03041
]
100026301 (EIF4A3)
03009 Ribosome biogenesis [BR:
mdo03009
]
100026301 (EIF4A3)
03012 Translation factors [BR:
mdo03012
]
100026301 (EIF4A3)
Enzymes [BR:
mdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100026301 (EIF4A3)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100026301 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
100026301 (EIF4A3)
Spliceosome [BR:
mdo03041
]
Complex C
Other components
EJC/TREX
100026301 (EIF4A3)
Ribosome biogenesis [BR:
mdo03009
]
Eukaryotic type
90S particles
Helicases
100026301 (EIF4A3)
Translation factors [BR:
mdo03012
]
Eukaryotic type
Initiation factors
eIF-4
100026301 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
100026301
NCBI-ProteinID:
XP_007482966
Ensembl:
ENSMODG00000002190
UniProt:
F7GE48
LinkDB
All DBs
Position
2:235818408..235840823
Genome browser
AA seq
411 aa
AA seq
DB search
MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacagccacgatggctacttcgggttctgcgcggaagagactgctgaaagag
gaagacatgaccaaagtggaattcgagaccagtgaagaagtggacgtgacacccactttt
gacacgatgggtttgcgggaggatttgctgcgaggcatctacgcctacggttttgagaaa
ccatcagctatccaacagcgtgctatcaaacaaattattaagggaagagatgtcattgca
cagtctcaatctggtacaggcaaaacagcaacatttagcatttcagttctccagtgtttg
gatattcaggtgcgagaaacccaggctttgatcttggctccaaccagggaattagctgtt
caaattcaaaagggtcttcttgctcttggtgactacatgaatgttcaatgtcatgcctgt
attggagggacaaatgttggtgaagatatcaggaaactggattatgggcaacatgtcgtt
gctggtacaccaggtcgtgtttttgatatgattcgtcgcagaagtttaagaactcgtgct
atcaagatgttggttttggatgaagctgatgaaatgcttaataaaggattcaaggaacag
atttatgatgtgtacagatatctgcctcctgctacccaggtagttttgatcagtgccaca
ttgcctcatgagatcttagaaatgaccaataaattcatgactgatccaattcgcatcctg
gttaaacgtgatgaattgactctggaaggaatcaaacagttttttgtggcagtggaaaga
gaagaatggaaatttgacactttgtgtgacctttatgatactttgactatcactcaagca
gtcatcttttgtaataccaagaggaaggtagactggctgactgagaaaatgagagaagcc
aacttcactgtttcatcaatgcatggagacatgccccaaaaagaaagagagtctatcatg
aaagagtttagatctggtgcaagccgagtacttatttcaacagacgtctgggccagagga
ttagatgttcctcaagtctctcttatcattaactatgacttgcccaataacagagaatta
tacatacacagaattgggagatcaggtcgatatggccgaaagggtgttgcgattaatttt
gtaaagaatgatgatatccgaattctcagagatattgaacagtactactcaactcaaatt
gatgaaatgcccatgaatgttgccgatcttatctga
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