Monodelphis domestica (gray short-tailed opossum): 100026417
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Entry
100026417 CDS
T01031
Symbol
TAF4
Name
(RefSeq) TATA-box binding protein associated factor 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03022
Basal transcription factors
mdo05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100026417 (TAF4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100026417 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdo03021
]
100026417 (TAF4)
03036 Chromosome and associated proteins [BR:
mdo03036
]
100026417 (TAF4)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100026417 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
100026417 (TAF4)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
100026417 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
100026417
NCBI-ProteinID:
XP_007475679
Ensembl:
ENSMODG00000016684
UniProt:
F7DMG1
LinkDB
All DBs
Position
1:478204390..478330135
Genome browser
AA seq
1113 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASTAHHHHHPHKTPEIRAGGAGGLGN
HVVSGSPGGAGVVGAAAAAAAAGANVQTESSKMGLAQEITKAGAGGVQGGVINHNTTRSQ
GSALLDGTSSSTSTSSSSTSTSSTTAGSEAAAAAAAAPGAAAISQGKSVVISSTMATALS
SRNGKIGTTTTVQTLNGSNVVMNSHHSGSAVAFAGTPAAAAAAAAPAVTLVNNGPGSVVL
PLGKGNAVNAVLPSASSNTVIQTSSFLSTAVSSSSSPTVISSSSIGSAGPTVALVRPPIH
TAGPAAASVAAATQNGSNTVINSTISVGSLPATAAASVATVGSGVSLQASLVNSQPGCSM
PATATTQVIKSESPKTIVQAVPQQQTLTTSGQSTTGGNMIIGQTMQGGIPNPSGIPPPPP
APGTPTGMAKGTANTVAQSLPRTPTATTGGIRATLTPTVLAPRLPQPPQNPTNIQNFQLP
PGMVLIRSENGQLLMLPQQTLAQMQAQAHVQTQPQNTMAPRPATPTSAPPVQISTVQAPG
TPIIARQVTPTTIIKQVSQAQTTVQPTTTLQRSPVVQPQIVLGGTTQTAALGTASAVQPG
TPQRTVQGATATSAAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNLLDG
KIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATTA
LTAVVLSSSVQRTAGKTAATVTSTLQPPVISLTQPTPVSVSKQGQPTPLVIQQPQKPGAL
IRSPQVTLTQTPMVALRQPHNRIMLTTPQQIQLNQLQTVPVVKPAVLPGAKALSTVSAQA
AAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETF
LLSAPLQRRILEIGKKHGITELHPDVVSYVSHATQQRLQNLVEKVSETAQQKNLSYKDDE
RYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQ
QQELAQMRQRDANLTALAAIGPRKKRKVDSPGPGSGTEGSGTSTAVPGSSGVGTTRQFTR
QRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggttcggatctgctggatgaggttttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctctctggagtcccagctggcggccagcacggcccatcac
caccatcaccctcacaagacgcccgagatccgggccggaggcgctggggggctggggaac
catgttgtgagcggcagccctggaggagccggagtagtaggagccgccgccgccgccgcc
gccgccggtgctaatgtccagacggagagcagcaaaatgggactggcccaggagatcaca
aaagcaggggccggaggagtgcaagggggtgttattaatcacaacacgaccaggtcccag
ggttcagctctgctggatggaacctcctcatccacctccaccagcagcagcagcaccagc
actagcagcaccacagcaggatccgaagctgctgctgctgctgctgctgctccaggggct
gctgccatcagtcagggcaaatcggtggtcatcagcagcaccatggcaaccgccttgtcc
tccagaaatggcaaaatcggtaccaccaccacggtgcaaactttgaatgggagtaacgtc
gtgatgaactctcaccattcaggaagtgctgttgcttttgctgggactccggctgctgct
gctgctgctgctgcacctgctgtcaccctagtcaacaacggaccaggatctgtggtgttg
ccgctgggaaagggaaatgctgtcaatgctgttttgccttcagcttcttcaaacactgtc
atccagacttcttctttcctcagcactgctgtatcctcctcttcctcacccaccgttatc
tcctcctccagcattggaagtgccggacctactgtggcactagtgaggccaccaattcac
acagcaggacctgctgcagcttctgttgctgcagccacccagaatgggagcaatactgtg
atcaattcaactatcagtgtggggagtttgcctgctactgctgctgcttctgtagctact
gtgggttctggagtttcccttcaggcatcccttgtgaacagccaacctggctgtagcatg
ccagccacagccaccacacaggtcatcaaatcagagtctcctaaaactatagtacaggca
gtgcctcagcagcaaacattgacaaccagtggccagtccaccacagggggtaacatgatc
attgggcaaactatgcaaggtggtatccccaatcctagtgggataccacctcctcctcca
gctcctgggacccctacagggatggctaaaggcactgccaatacagtggcacaaagtctg
ccaaggactccaacagctactacaggtggtatccgagcaacgttgactcctacagtttta
gcaccccgtctgcctcaaccacctcagaatcccacaaatattcaaaattttcaactaccc
ccaggtatggtcctcattcgaagtgagaatggacagttattaatgcttcctcaacagacc
ttggcacagatgcaggcacaggctcatgttcagactcagcctcaaaataccatggcacca
cgccctgcaactcccacaagtgcccctcctgttcagatatcaactgtacaggctcctgga
acaccaattattgcacggcaagtgacaccaactaccataattaagcaagtgtctcaggcg
cagacaacagtacagccaactacaacattacaacgttctcctgtagtacagcctcagatt
gttctgggtggtactacacagacagctgcattaggaacagcctctgctgtacaacctgga
actcctcagaggactgtacaaggagccacagcaacttctgctgctgccacagaaacaatg
gaaaatgtgaagaaatgcaagaattttctatcaacattaataaaactggcttcatctggg
aaacagtctacagagacagcagcaaatgtcaaagaattagtacagaacttgctggatggg
aaaattgaagcagaagattttaccagcaggttatatcgggaacttaattcttcacctcaa
ccttacctcgtgcctttcctgaagaggagtttacctgccttgagacagttaaccccagat
tcggcagcttttatccagcaaagtcagcagcaacagcccacaacacaggcaacaactgcc
ctaacagcagtggtactaagcagctctgttcagcgcacagcagggaagactgctgctact
gtcacaagcactcttcagcctccagtaatcagtctgacacagccaacaccagtcagcgtt
agcaaacaaggacaacctacacctctggtaatccaacaaccacagaaaccaggggcattg
ataagatctccacaggtaacattgacacagacgcctatggtagcattgcgacagccacac
aatcgtatcatgctcactactcctcagcaaattcaactaaatcaacttcagacagttcct
gtggtcaaacctgctgtattacctggcgccaaagctctttctactgtttcagcacaagcg
gctgctgcacaaaagaataaacttaaagaacctggaggtggttctttcagggatgatgat
gacattaatgatgttgcatcaatggcaggagtcaacttatcagaggagagtgcaaggata
ttggcaacaaattctgaattagtgggcacattaacaagatcttgtaaagatgaaaccttt
ctcctttcagcacctttacaaagaaggatattagaaataggtaaaaagcatggaataaca
gaactgcatcctgatgtagtaagttatgtgtcacatgcaacacagcaaaggctacagaac
cttgtagaaaaagtatcagaaactgcccaacaaaagaatctttcttataaggatgatgaa
aggtatgaacaggcaagtgatgtccgggcacaactcaaattctttgaacagcttgatcaa
attgaaaaacagaggaaagatgaacaagagagagaaattttaatgcgagcggcaaagtct
cggtctaggcaagaagatccagaacaacttaggttgaaacagaaggcaaaggagatgcag
caacaagaactagcacagatgaggcaaagagatgccaacttaactgcattagcagcaatt
ggtcctaggaagaaaaggaaagtggattctccaggacctggatcagggacagagggttct
ggaacaagtacagcagtcccgggcagttctggagttggaacgactagacagtttacgcga
caaaggataacgcgggtcaacctcagggacctcatattttgtttagaaaatgagcgagag
acaagccattcactattgctatacaaagcattccttaagtaa
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integrated database retrieval system
