Monodelphis domestica (gray short-tailed opossum): 100026438
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Entry
100026438 CDS
T01031
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo02010
ABC transporters
mdo04145
Phagosome
mdo04612
Antigen processing and presentation
mdo05163
Human cytomegalovirus infection
mdo05168
Herpes simplex virus 1 infection
mdo05169
Epstein-Barr virus infection
mdo05170
Human immunodeficiency virus 1 infection
mdo05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100026438
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100026438
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
100026438
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100026438
05168 Herpes simplex virus 1 infection
100026438
05163 Human cytomegalovirus infection
100026438
05169 Epstein-Barr virus infection
100026438
09163 Immune disease
05340 Primary immunodeficiency
100026438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdo02000
]
100026438
Enzymes [BR:
mdo01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
100026438
Transporters [BR:
mdo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
100026438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
ABC_ATPase
AAA_23
AAA_29
AAA_15
AAA_25
HopA1
Zeta_toxin
AAA_16
AAA_11
Motif
Other DBs
NCBI-GeneID:
100026438
NCBI-ProteinID:
XP_007483708
LinkDB
All DBs
Position
2:complement(269821097..269825397)
Genome browser
AA seq
526 aa
AA seq
DB search
MILHANSFPPAFLLILLSFSSLSSLSAGFRGGFFTLVHSQINLRIRRLLFSSLLHQDLSF
FQETKTGELNSRLSSDTNLMSSWLSLNANVFLRSLVKVVGLYGFMFSLSPRLAVLSLLEV
PLSMATEKIYNARRQTVLQQIQDAVAKAGQVVREAVGSLKTVRSFGAEEDEAQRYEEALE
HKRQLEWHRDWERAAYVLLCRVLQLGMQVLMLNCGLRQILSGELSRGGLVSFLLYQGNVG
RSVQTLVYICGDMVSNVGAAEKVFHYLDREPQMPRPGVLVPPSLRGLVEFQDVFFAYPMQ
PTKPVLKGVTFTLYPGKVTALVGPNGAGKSSVAALLQNLYQPTRGQLLLDGEPLPQYEHK
YLHSQVSVVGQEPVLFSGSVRDNIAYGLESCRDAEVMAAVRAAGADGFINNMEHGLDTAV
GEKGSQLSAGQKQCLAIARALVRNPRVLILDEATSALDTECEQALQESVLQGHRTVLVIA
HRLQTVQAADHILVLEQGKLVEQGTHTQLMAQRGLYHHLVQGQFEA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgattcttcatgctaactcatttccacctgcatttctcctcattcttttgtctttctca
tcccttagctcattatctgcaggtttccgaggaggtttcttcacgcttgtccactctcag
atcaacctgcgcattcggcgtctgctcttctcttctctgctacaccaggacctcagcttc
ttccaggagaccaagacaggtgagttaaattcacgcctgtcttcagacaccaacttgatg
agcagttggctttctttaaatgccaatgtattcctgcggagcctagtgaaggttgtggga
ctgtatggcttcatgttcagtctctcacctcgactcgctgtcctctccctgctggaagtg
cccctttcaatggctactgagaagatctacaatgcccgacgtcagacagtgctccagcag
atccaggatgctgtagcaaaggctggacaggtggtgagggaggctgtgggaagcctgaaa
accgtgaggagttttggagcagaggaggatgaagcccagcgctatgaggaagccttggag
cacaagcgtcagctggagtggcaccgggactgggagagagcggcatacgtgctcctctgt
cgggttcttcaactggggatgcaagtgttaatgctgaattgtgggctaaggcagatcttg
tctggagagctctccaggggaggccttgtctcctttctgctctatcaggggaacgtgggg
agatctgtacagactctagtgtacatctgtggggacatggtgagcaatgtgggtgctgca
gagaaagttttccactacctggaccgtgagccacagatgcctcgtcctggggtactggtc
cctccttccctccgtggcctcgtggaattccaagatgtcttctttgcctatcccatgcag
ccaaccaaacctgtgctcaagggagtgacattcaccctgtatcccggaaaagtgacagcc
ctggtggggcccaatggggctgggaagagctcagtggctgcactgctgcagaatctctac
cagcccacaaggggccagctgctgctggatggggagcccctgccccagtatgagcacaag
tacctgcactcacaggtgtctgtggttgggcaggagcctgtgctcttctcagggtctgta
agggacaacattgcttatgggctggagagctgcagagatgctgaggtgatggctgctgtc
cgggcagctggtgctgacggattcattaacaatatggagcacggcctggacacagctgtg
ggggagaaggggagccagttgtctgcaggacagaagcagtgtctggccattgctcgggcc
ctggtgcggaatccccgagtcctcattctagacgaggccaccagtgcattggacacggag
tgtgagcaggcgcttcaggagagcgtgctgcaagggcatcggacagtgctggtgattgca
catcgcctgcagacagtgcaggctgctgaccacatcctggtgctggagcaagggaagctg
gtggagcaggggactcacactcagctcatggcccagagaggcctctatcaccacctggta
caggggcaatttgaagcctga
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