Monodelphis domestica (gray short-tailed opossum): 100026490
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Entry
100026490 CDS
T01031
Symbol
CHD5
Name
(RefSeq) chromodomain helicase DNA binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdo03036
]
100026490 (CHD5)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100026490 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
Helicase_C
CHDNT
Chromo
HDA2-3
ResIII
HTH_CHD1_Hrp3
DEAD
AAA_22
CHDII_SANT-like
Motif
Other DBs
NCBI-GeneID:
100026490
NCBI-ProteinID:
XP_016288787
LinkDB
All DBs
Position
4:complement(394090838..394238919)
Genome browser
AA seq
1637 aa
AA seq
DB search
MRGPLGTEEEPLQLPEEEEEEMENDEDMSGLSPYSSKGLSNTPVFWLPPEEEDGGLEGLE
EFYPEEPVCVPKKKKSKKLKENKTSKVKRRKKEGSNDELSDNEEEMEEKSDSEGSDYSPN
KKKKKKLKEKKEKKSKRKKKDEEEDENEDGGLKEPKSSGQLMEEWGLDDVDYLFSEEDYH
TLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAA
VETVTIAPPLTVSPPQPIQPLPIRKAKTKEGKVLPFCSQCPPLKGKVQRILHWKWTEPPA
PFITVLPPPDADPGIPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNY
QRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPHYAKMEERFYRYGIKPEWMMIHRILNHSF
DKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYENLKQGYWNHRELMLGEDSRPPKRLNKK
GKKLKDDKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTI
LADEMGLGKTVQTIVYLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTG
DKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAILGSIEWA
CLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLE
GFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKF
ILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKS
SGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA
IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK
VMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFK
DDVEGMMPQGQRINMPEPVAPAPDVQASKGGGTLAAGVKKKHGSTPPGDNKDVEDSSVIH
YDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVVMDDVFLPSGFSVAS
APFPSTLLWLHLGGLGMGGHRSSLGLCPPGARYSRQHVLTRIGVMSLVRKKVGGEFGDRA
HHCGHFSGIVVSDKMEAQLGFLDEKEQMEQKPPKPPELQIPGMPTDRGDGEEKHENLENK
ERSREERREENEKIDPSTDQLLKDDAFPDKDKSLEKMELNLGHGRGDDKDFRPEDSKVEE
KETAESQQNGEKEDDEDGKKDDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYD
IWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFK
LLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPAN
AVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTVQQ
GSFGSSQMYNNNFGPNFRGPGPGGIVNYSQMPLGPYVTATPTGPPASHPERKGADSLKDG
AALGRKGKLSDVICIED
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcacagaggaggagccgctgcagctgcccgaggaggaggaagag
gagatggagaacgacgaggacatgtcaggactgtctccttactcctcgaagggcctgagt
aacacccctgtcttttggttgcctccagaagaagaggatgggggtcttgaaggtctggaa
gaattctatcctgaggaaccagtctgtgttcccaagaagaaaaaatccaagaaactcaag
gagaacaagacatccaaagtaaaaaggagaaagaaagaggggagtaacgatgagctgtct
gataatgaagaggagatggaagagaaatcagacagtgagggaagcgactattctcctaat
aaaaagaagaagaagaagctcaaagagaagaaagagaaaaaatccaagcggaaaaagaag
gatgaagaggaggatgagaatgaagatggaggtttaaaggagcccaagtcttcgggccag
ctcatggaggaatggggcttggatgatgtggattatctgttctctgaagaagattatcac
actttgaccaactacaaggccttcagccaatttctcaggcctctcattgccaagaagaac
cccaagatccccatgtcaaagatgatgacggtcctgggggccaagtggcgagaattcagc
gccaacaacccattcaaggggagctcggcggcagccgcggcagcagcagtggctgctgcc
gtggagacagtcaccattgctccaccgctgaccgtcagccctcctcagcccatccagccc
ttgcctatccggaaggccaagaccaaggagggcaaagttttgcctttctgttctcagtgc
cctcccttgaaagggaaagtccaacggatcttacactggaaatggacagagcctcctgct
cccttcatcactgtgctgcccccgcctgatgctgatccaggcatccctccgccgaagcct
ctggagggcatccctgagcgggagttctttgtgaaatgggctgggctgtcctattggcat
tgttcctgggtgaaggagctgcagctggaattgtatcacacggtgatgtaccggaactac
caaaggaagaatgacatggatgagccaccaccctttgactatggctctggcgatgaggat
ggtaagagtgagaagaggaagaacaaggacccccactacgccaagatggaggagaggttt
tatcgctatgggatcaagcctgaatggatgatgattcaccggatcctgaaccatagcttt
gacaagaagggggatgtgcattacctgatcaagtggaaggaccttccctacgaccagtgt
acctgggagattgatgacatcgacataccctactatgagaatctgaagcaaggctattgg
aaccacagggagttgatgttaggagaagattcccggccacccaagagactgaacaagaaa
ggaaaaaaactgaaagatgacaaactggagaagcccccggagacacctttagtggatccc
actgtcaagttcgacaagcaaccatggtacatcgatgccacagggggcaccctccaccct
tatcagctggagggactgaactggctgaggttctcctgggcccagggcacagataccatc
ttggccgatgagatggggctggggaagacagtccagaccatcgtgtacttgtattctctc
tataaggagggtcactcaaaggggccatacttggtcagtgcgcccttgtccaccatcatc
aattgggagagggaatttgagatgtgggcacctgacttttacgtggttacttacacgggg
gacaaggagagccgatcggtgattcgggagaatgagttttcctttgaggacaacgccatc
cggagtgggaagaaggttttccgcatgaaaaaagaggcacagatcaagtttcatgtcttg
ctcacatcctatgaactcattaccattgaccaggccatcctggggtccattgaatgggcc
tgtcttgtggtagatgaagctcacaggctgaaaaacaaccagtccaagttctttagggtg
ttgaatagctacaagattgactacaagctgctgcttacggggacacccctgcagaacaac
cttgaggaactgttccatcttctaaacttcctgactccagaacggttcaacaacctagaa
ggcttcctggaggagtttgctgatatttccaaggaagatcaaatcaagaagctgcatgac
ttgctggggccccacatgctgaggcgactgaaggctgatgtgtttaagaacatgccagcc
aagacggagctgattgtgcgggtggagctaagccagatgcagaagaaatactacaagttc
attctgaccagaaattttgaagccttgaactccaaaggcggtggaaatcaggtgtctctg
ctgaacatcatgatggacctgaagaagtgctgcaaccacccgtatctcttccccgtggcc
gccgtggaggcaccagtcttacccaatggttcctacgatggcagctccttggtcaagtct
tctgggaagctcatgctcctacagaagatgctgaaaaagttgcgtgatgaaggacaccgg
gttttaatcttctctcagatgaccaaaatgctggacctgctggaggatttcctggagtac
gaaggctataagtatgagcgaattgatggtgggatcacgggaggtcttcggcaagaagct
atcgacagattcaatgctcccggagcccagcagttctgtttcctcctctccacccgggct
ggtggtctgggcatcaacttggccactgctgacaccgtcatcatctacgactcggactgg
aatcctcacaatgacatacaggccttcagcagagcccaccgcatcggccagaacaagaaa
gtcatgatttaccgcttcgtcacaagagcctccgtagaggaacgaatcacccaggtcgcc
aagcgcaagatgatgctcacgcacctagtggtgcgacctggcctgggatcgaagtctggg
tccatgaccaagcaggagctggacgacatcctgaagtttgggacagaggagctctttaaa
gatgatgtggaaggcatgatgcctcagggtcagcggatcaacatgcctgagcccgtggcg
cccgcccctgatgtccaggcctccaaaggtggtggcaccttagcagctggggtgaaaaaa
aagcatggcagcaccccaccaggtgacaacaaggacgtggaagacagtagtgtgatccat
tatgatgatgccgccatttccaagctgctagatcggaaccaggatgccacggatgacaca
gagctgcagaacatgaatgagtacctcagctccttcaaggtggcccaatacgtggtccgg
gaagaagatggagtggtaatggatgatgtttttctaccttctgggttctctgttgcgtca
gccccctttccttccaccttactctggctacatcttggggggctgggcatgggagggcac
aggagctctctgggcttgtgccctccaggagccaggtattctcgacagcacgtgctcacc
cggattggagtcatgtcactagttaggaagaaggtgggtggggagtttggggacagagcc
caccactgtggtcatttttcaggtattgttgtttcagacaaaatggaagcccagctgggc
ttcttggatgaaaaagaacaaatggaacagaaaccccccaaacctcctgaacttcagatt
ccagggatgcccactgacagaggggatggtgaggagaagcatgagaaccttgaaaacaaa
gagagatcccgagaagagaggagggaagagaatgaaaagattgatccctccacagatcag
ctgctcaaagatgatgcattccctgacaaagataaatccctggagaagatggagttaaat
ctgggccacggcagaggggatgacaaagatttccggccagaggactccaaggtagaagag
aaggaaacagcagaaagccagcaaaatggggaaaaagaagatgatgaggatgggaagaag
gacgacaagaacgggaaatttaaattcatgtttaacattgccgacgggggattcacagaa
ttgcacacgctgtggcagaatgaggagcgtgcggctgtctcctcagggaagatctatgac
atttggcatcggcgccatgattactggcttctggcgggtatcgtgacgcacggctatgcc
cgatggcaggatatccagaatgacccccgctacgtgatcctcaatgagcccttcaagtct
gagatccacaagggcaattacctggagatgaaaaacaaattcctggctcgaaggtttaag
cttctagagcaggcgctagtgatcgaagaacagctcaggagggctgcgtacctcaacatg
acccaagaccccaaccatccagccatggccttgaatgctcgtctggccgaagtggaatgc
cttgccgagagccaccagcacctgtccaaggagtccctggctgggaacaagcctgccaat
gctgtcttgcataaggtactgaaccagctggaagaacttttgagtgacatgaaggctgat
gtcacccgcctgccctccatgttgtcccggatcccgcctgtggccgctcgcctgcagatg
tcggaacgcagcatcctgagccgcttgacaaaccgagccggagaccccaccgtccagcag
ggttctttcggctcctcccagatgtacaacaacaactttgggccaaacttccggggtcct
ggaccaggcgggattgtcaactacagccagatgcccctcggcccctatgtgactgccacg
cccactgggccacctgccagccaccccgaaagaaaaggagctgactcccttaaagatggt
gctgctttgggacgaaaggggaaactcagtgatgtcatctgcattgaagactaa
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integrated database retrieval system
