Monodelphis domestica (gray short-tailed opossum): 100026537
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Entry
100026537 CDS
T01031
Symbol
VPS8
Name
(RefSeq) VPS8, CORVET complex subunit
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100026537 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100026537 (VPS8)
Membrane trafficking [BR:
mdo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100026537 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
zf-RING_Vps41
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
zf_RING_Vps8_fungal
Clathrin
WD40_CDC20-Fz
zf-RING_11
zf-RING_2
zf-RING_UBOX
EIF3I
Beta-prop_WDR5
Beta-prop_WDR3_1st
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
100026537
NCBI-ProteinID:
XP_007486252
Ensembl:
ENSMODG00000002654
LinkDB
All DBs
Position
2:540850379..541025293
Genome browser
AA seq
1431 aa
AA seq
DB search
MASEGDHESEGVTSSPQGGLGEGLAQALALEASLPRLACIDLDKDLECRNELIDDKEFDI
PQVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDTHSYDTSSVASSDSGDRTNLKRK
KKLLDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFG
KDQNQALRLCLGNTSVGGQYGAISALSINHDCSRLLCGFAKGQMTMWDLASGKLLRSITD
AHPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIE
PLHSKAELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFV
AANNYVNPTLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTIVLLD
SVEKLHVIDRLTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISS
YGGQIFYLGTKSVYVMTLRNWRERVDHLLKQECLTEALSLAWSFHEGKAKAVVGLSGDAS
KRKAVVADRMVEILFHCADRALKKCPDQGKIQVMEQHFQDTVPVIVDYCLRLERRDLLFS
QMYDRFSENSVAKGVFLECLEPYILSDQLVGITAQVMKDLLVHFQDKKLMENVETLIVHM
DITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFKVIAPPLSAGKSLTDEQV
IMGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASSEEEIYPYICT
LLHFDTREFLNVLALTFEDFKNDKQALEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLA
RQLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRM
AERAEFYQICEFMYEREHQYDKIIDCYLRDPLRKEDVFNYIHNILSIPGHSPEEKQSVWQ
KAMEHIEALVSLNPCKAAELVATHFSGQVEAVIQKLQSPLLLFQFLRSLLDPREGVSMTQ
ESPQVAPCITEQFIELLCQYSPHEVIDTLQVLESYRLEETIQITQKYQLLEVCAYLLEKK
GDVHGAFLIMLQRLQSKLQEFTKESEDAKEEPSLKDVEVILVETIALCQRNSHSLNQQQR
EALWFPLLEAMMAPQKLSGSSAPHRHAESLKSLTMQVLNSMAAFIALPSILQRILQDPVY
GRGQLGEIQGLILGMLDTFSYEQTLLETTTSLLNHDLHWSLCNLRASVTRGLNPKQDYCC
ICLQQYKRRQEVADDIIVFSCGHLYHSLCLLNKECSVGTGRQARWTCYRCNSSHKAGKLS
ENASERRKGQLSQAQMKTSPSCPSPRGDSAKKTPSEPGLDPQQMQAFDHLCRLYRGTSRV
TSRFLFCFSLISALLRDPWSSVSGPFPAQTAPQQSLLGQPPGFPAGSASHW
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgaaggagaccacgagagtgaaggtgtgacatcttcaccccaaggagggctt
ggagaaggcctggcccaggctcttgctctggaggcttcacttcccagactcgcctgcata
gacctggacaaggatctggagtgcagaaatgagctaattgatgacaaggagtttgatatt
cctcaggtagacaccccacccaccctggagagcatccttaatgagaccgatgatgaagac
gagtcttttgttctcgaggaccccactctgttaaacatcgacaccatcgacacccactcc
tatgacacgtcatctgtggcaagctcagacagtggggatcgaaccaatctgaaaaggaag
aagaaacttcttgactctttctcactccatggctcagtcatgagacattcgcttctgaag
gggatctctgcccagattgtctcagcagctgataaagtcgatgctggcttgcccactgca
atagctgtatccagtttgatcgcagtggggacatcccatggattggccttaatctttgga
aaagatcagaatcaggccctccgcctctgcctgggcaacaccagcgtcggaggccagtac
ggggccatctctgctctcagcatcaaccacgactgctccaggcttctctgcggctttgcc
aaagggcagatgaccatgtgggacttggccagcgggaagctcttgcgatcaattacagat
gcccacccccccggcacggcgatcctgcacatcaagtttacagatgacccaactcttgcc
atttgcaacgacagcggcggttctgtgtttgagctgacatttaagcgagtgatgggagtg
agaacctgtgaatcccggtgtctgttcagtgggtccaagggggaagtttgctgtattgag
cccctgcattccaaggctgagctgaaggatcaccccatcacccagttttccttgctggcc
atggcgtctttgactaaaatattggtcattggactgaagccatctttaaaagtgtggatg
acttttccctacggacggatggatccctccagcgtcccactgctggcctggcattttgtg
gcagccaacaattacgtgaaccccacactggccttttgcagaggagatgtcgttcacttt
ctgctggttaaaagagacgaatcaggagccatacatgtcacgaaacaaaagcatctgcac
ctgtactatgacctcatcaacttcacctggatcaattcccggacaatcgtgctgctggac
agtgtggagaagctacacgtgatcgatcggctgacgcaggaagagcttgagactgtggaa
atttccgaggtgcagctggtctacaatagcagccacttcaagtccctggccacagggggc
aatgtcagccaggccctggctctggttggagagaaagcctgttatcagtccatcagcagt
tatggcggtcagatcttttatttagggacaaagtctgtttatgtgatgactctgaggaac
tggagagagagagtggatcacctcctgaaacaagagtgtctgactgaggccctgtcccta
gcatggtctttccatgaaggaaaagccaaagccgtcgtgggcttgtcaggggatgccagt
aagcggaaggctgttgtcgctgatcggatggttgaaatactcttccactgtgcagaccgg
gctctgaaaaaatgcccagaccagggtaaaatccaggtgatggagcagcattttcaggac
acggtgcccgtcatcgtggattattgccttcggctggagcgcagggatcttctgtttagc
cagatgtacgacaggttcagtgagaactcggtggccaagggggtcttcttggagtgcctc
gagccttacattttaagtgaccagctggtggggatcacagcccaggtgatgaaagacctg
ctcgttcacttccaagataaaaagttgatggaaaacgtagagaccctcattgtgcacatg
gatatcaccagcctggacatacagcaggttgttctcatgtgctgggaaaatcgcctctac
gatgccatgatctacgtctacaacaggggcatgaatgaattcatcagtcccatggagaaa
cttttcaaggtcattgcccctcctctaagtgccgggaagtctctgacagatgagcaggtt
attatgggcaacaagcttcttgtctacataagttgttgcctggcaggtcgtgcctatccc
ctgggggacatccctgaagacttggtgcctttggttaaaaaccaggtctttgaattcctg
atccgtctgcattcagcggaggcctcctccgaggaagagatctacccctatatctgcacc
ttgcttcactttgacaccagggagttcctgaacgtcctcgccctgacttttgaagatttt
aaaaatgacaagcaggctctggaataccagcagcgaatcgtggacatcttgctaaaggtc
atggtggaaaattccgattttactccttcacaagttggatgtctcttcaccttcctcgcc
cgccagctcgccaagcctgacaatacactgtttgtgaacaggacgctttttgaccaggtt
ctcgaattcctctgcagccccgatgacgactcccgacactctgagaggcaacaggtactc
ctagaactgctccaggctggaggaattgtgcagtttgaggagagccgactcatccggatg
gccgagagagctgagttctaccaaatttgtgaatttatgtatgaaagagagcaccagtat
gacaagattatcgactgctatttacgggaccccctgagaaaggaagacgtgtttaactac
attcataacatcttatccattcctgggcacagcccagaggagaagcagtccgtgtggcag
aaagccatggaacatattgaggcactggtgtctctgaacccctgcaaagcagcggagctg
gtggccacccacttctctgggcaagttgaggcagttattcaaaaactccagagcccactc
ctgcttttccagtttctgaggagccttcttgacccaagggaaggtgtttccatgacccaa
gagtcgccacaggtagccccctgcatcacagagcagttcatcgaattgttgtgccaatac
agccctcacgaggtgattgacaccttgcaagtcctcgagtcctaccgcctggaagagacc
attcagattacccagaagtatcagcttctcgaagtgtgtgcctacctcctggaaaagaaa
ggcgatgtccatggggctttcttaataatgcttcagagactacaaagcaagctccaggag
tttacaaaagaaagcgaagatgcaaaagaagagccctcattaaaggatgtggaagtgatc
ttagtggagacaatcgccctctgccagaggaattcgcatagtctaaaccagcaacagcga
gaggctctctggttcccgctgttggaggcaatgatggccccgcagaagctgtccggttcg
tcagctccacaccgacatgcagaatctctcaagtctctgaccatgcaggtgctgaacagc
atggcggccttcatcgccctcccgtccatcttgcagcgaatcctacaagatcccgtttat
ggaagaggacaacttggggagatccaggggctcatcctaggaatgctggataccttcagc
tatgagcagacgctcctggaaacaacgacgagcctcctaaaccacgacctgcactggtcc
ctctgtaacctgagagcgtcggtcaccaggggcttgaaccccaagcaggactactgctgc
atctgcctgcagcagtacaagagacgccaggaggtggctgatgacatcatcgtcttcagc
tgcggccacctgtatcactccttgtgcctgctcaacaaagagtgctccgtggggacgggg
cgccaggcccgctggacgtgctacaggtgcaattccagccacaaggccgggaagctcagc
gaaaacgcctctgagaggaggaaaggacagctcagccaggcccagatgaaaacatctccc
tcttgtccttcaccccgaggagattctgctaagaagaccccgtccgagcccggcctggac
ccccagcaaatgcaagcctttgaccacctctgccgcctctaccggggaacctccagggta
acgagccgattccttttctgcttctctctgatttccgcccttctgcgggacccctggagc
tctgtctccggccccttcccagcccagacggcgccacagcaaagcctgctgggacaacct
cccggcttcccggccggctctgcctctcactggtga
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