Monodelphis domestica (gray short-tailed opossum): 100027004
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Entry
100027004 CDS
T01031
Symbol
HNRNPU
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100027004 (HNRNPU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdo03041
]
100027004 (HNRNPU)
Spliceosome [BR:
mdo03041
]
Common components
Common spliceosomal components
hnRNP proteins
100027004 (HNRNPU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
SRP54
Motif
Other DBs
NCBI-GeneID:
100027004
NCBI-ProteinID:
XP_003340222
Ensembl:
ENSMODG00000006515
LinkDB
All DBs
Position
2:142860752..142872095
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AA seq
838 aa
AA seq
DB search
MSSSPVNVKKLKVSELKEELKKRRLSDKGLKAELMERLQAALDDEEASGGRPTLEPGNGS
LDLGGDSAGRSHTQPSGAGLEQEAATTADEEEEEEEEEEEEGIAALDGDQMELGEENGAA
GAADSGPMEEEEAGGSSEDENGDDQGFQEGEDELGDEEEEAGAGDENGHGEQQXSPPTTP
QQQQPQQQRGAAKEAAGKSGGPTSLFAVTVAPPSAARQAQQQAGGKKKAEGGGGGGRPGA
PAAGDGKTEQKGGDKKRGVKRPREDHGRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDTV
VCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVR
HLYTKDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGDKFDENDVIS
CFANFEGEEVELSYAKNGQDLGVAFKINKEVLAERPLFPHVLCHNCAVEFNFGQKEEPYF
PIPEEYTFIQNVSLDDRVRGPKGPDEKKDCEVVMMIGLPGAGKTTWVTKHAAENPGKYNI
LGTNTIMDKMMVAGFKRQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSAA
AQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLPEVAE
CFDEITYVELQKEEAQKLLEQYKEESKKSLPPEKKQNTGSKKSNKNKSGKNQFNRGGGHR
GRGGFNMRGGNFRGGAPGNRGGYNRRGNMPQRGGGGGGSGGIGYPYPRGPVFPSRGGYSN
RGNYNRGGMPNRGNYNQNFRGRGNNRGYKNQSQGYNQWQQGQFWGQKPWSQHYHQGYY
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttcgccagtgaacgtgaagaagctgaaggtgtcggagctgaaggaggagctc
aagaagcggcgcctttccgataagggcctcaaggccgagctcatggaacgactccaggcc
gctctagacgacgaagaggcctctggaggccgccccaccttggagcccgggaacggcagc
ctggacctgggcggggattccgccgggcgctcgcacacgcagccctcgggagcaggcctc
gagcaggaggccgcgaccacggccgacgaggaagaggaggaggaggaagaagaggaggag
gaagggatcgcggccctggatggtgaccagatggagctaggggaagaaaacggggccgcg
ggggcggccgattcgggtccgatggaggaggaggaggcgggcggctcctcggaggacgaa
aacggcgatgaccagggcttccaggaaggggaggacgagctcggggacgaggaggaggaa
gcgggtgcgggagatgagaacggacacggggagcagcagngctcaccgccgactacgccg
cagcagcaacagcctcagcagcagcgcggggcggccaaggaggccgcagggaagagcggc
ggccccacctcacttttcgccgtgacggtggcgcctccctcggcagcgaggcaggcccag
cagcaggcgggaggcaagaagaaggcggaaggcggcggaggcggtggccgtcccggggct
ccggcggcgggagatggcaaaacagaacagaaaggtggagacaaaaagagaggtgttaaa
agacctcgtgaagatcatggccggggctattttgagtacattgaagaaaacaaatacagc
agagctaaatctcctcagcctccggttgaagaggaagatgaacattttgatgacacagtg
gtttgtcttgatacttataattgtgatctacattttaaaatctcaagagaccgtctcagt
gcttcttcactaaccatggagagttttgcttttctttgggctggagggagagcttcttac
ggagtttcaaaaggcaaagtttgttttgaaatgaaggttacagagaagatcccagtgagg
catttatatacaaaagatattgacatacatgaagtacggattggctggtcacttacaacc
agtggaatgttacttggtgaagaagaattttcttatgggtattccctaaaaggaattaaa
acatgcaactgtgagaccgaagactatggggacaagtttgatgaaaatgatgtgatttca
tgttttgctaattttgaaggtgaagaagtggagctttcctatgcaaagaatggacaagac
cttggtgttgccttcaaaattaacaaggaagttcttgctgaacgacctctcttccctcat
gttctctgccataactgtgcagttgagtttaattttggtcagaaggaagaaccatatttc
ccaatacctgaggaatatactttcatccagaatgtctccttagatgatcgcgttagaggg
ccaaaaggaccagatgagaagaaagattgtgaagttgtgatgatgattggcttgccagga
gctggaaaaaccacctgggttactaagcatgcagcagaaaatcctggtaaatacaacatt
ctgggaacaaacactattatggataaaatgatggtggcaggctttaagagacagatggca
gatactggaaaattgaacacgctgttgcagagagccccacagtgtcttgggaaattcatt
gagatagctgctcggaagaagcggaactttattctggatcagacaaatgtgtctgcagct
gcccagaggagaaaaatgtgcctgtttgcaggctttcaacgcaaagctgtggtagtttgc
ccaaaagatgaagactacaagcagagaacacagaagaaggcagaggtggagggaaaggat
cttccagaacatgcagttctcaaaatgaaagggaactttacactgccagaggtagctgag
tgttttgatgaaataacctatgtagagctgcaaaaagaagaagcccaaaagctgttggag
cagtataaggaagaaagtaaaaaatctcttcctccagagaagaaacagaatactggctca
aagaagagcaataagaataagagtggcaaaaaccagtttaatagaggaggtggtcataga
ggacgtggaggatttaacatgcgtggtggaaactttagaggaggtgctcctggaaatcgt
ggtggttataataggaggggaaatatgccacagcgtggtggtggaggaggaggaagtgga
ggaattggctatccttaccctcgtggccctgtctttcccagccgaggtggatactcaaac
agaggcaactacaacagaggtggaatgcccaacagggggaactacaaccagaacttcaga
ggccgaggaaacaatcgtggctacaaaaatcaatctcagggctacaaccagtggcagcag
ggtcaattctggggtcagaagccatggagtcagcattatcaccaaggatattattga
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