Monodelphis domestica (gray short-tailed opossum): 100027053
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Entry
100027053 CDS
T01031
Name
(RefSeq) protocadherin beta-2-like
KO
K16494
protocadherin beta
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mdo04515
]
100027053
Cell adhesion molecules [BR:
mdo04515
]
Cadherins
Protocadherins
100027053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
He_PIG
InlK_D3
MAP17
Motif
Other DBs
NCBI-GeneID:
100027053
NCBI-ProteinID:
XP_001377464
Ensembl:
ENSMODG00000011229
LinkDB
All DBs
Position
1:333008848..333011925
Genome browser
AA seq
790 aa
AA seq
DB search
MEREGAMILQQRQVIFLFILLGVSGAASELEQFSVVEEMERGSFVANVAKGLGLDAQELS
NRGVRVAFKGNKEYLQLHPKTGDLFLREKLDREDLCGSIEPCVLPFQILLENPFQIIRAE
LIVEDINDHSPAFLDNEMILKIPENTFPGSVFVLENAQDLDVGSNSLQDYKISPNSHFHS
QIQDSSKGRIYPELVLNKALDREELSEILLILTAVDGGVPPRSGSAQVRVIIVDINDNAP
IFIQSQYEVQISENISVGSKVVTVSATDLDIGNYGEISYTFLHASENIRKTFHLKEKLGE
LYLKEKVDFESIQSYTINIQATDGGGLSGECTVIVQVMDLNDNPPELTMSSLTSPIPENS
PEIVFAVFSVSDLDSGENGRMVCSIQDDLPFSLKPSVENYYTLVTEGALDRERRAEYNIT
ITVMDLGSPRLKTEHNITIWISDINDNPPVFTQTTYKLYLQENNSPALHIGSVSAKDRDS
GINAKVTYSLLPPENGDLPLFSYISINSDNGHLYALRSLDYETIQVFQFTVTATDGGSPS
LSSQALVQVVVQDMNDNSPFVLYPLQNGTTPCNDLVPRTAEPGYLVTKVVAVDRDWGQNS
WLSYQLLKATDPGLFTVWAHNGEVRTARPISDRDAIKQRLLVLVKDNGQPPLSTAATLNV
LLVDGFSEPYMQFPDAPKEPIQTDSLTTYLVISLASVSFLFLVSVIMVIAIRLWKRKRDA
TDAAHFNPNGPFPSHLVDVSGTGTLSQSYQYEVCLTTGSGTSEFKFLKPIIPTLPPAEGN
GKDSVENPHL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggaaggggccatgattctacaacaaaggcaagttatttttctctttattcta
ttgggtgtgtctggggcagcttccgaactggagcagttttccgtagtggaggagatggag
agaggctcctttgtggccaatgtggcaaagggcttgggtctggatgcccaggaattgtca
aatcggggggtcagagtcgctttcaaagggaacaaagagtatttacagctgcaccctaaa
actggggatctattcctgagagagaaactggaccgagaggatctgtgcggctccattgag
ccctgtgtgctgcctttccagatcttattggaaaatccctttcagattattcgggctgaa
ctgatagtggaagacattaatgatcattcaccagcgttcctagacaatgaaatgatactg
aaaattccggagaacaccttccccggaagtgtatttgtgctagaaaatgcgcaggatttg
gatgtaggaagcaacagtctacaggactataaaatcagccctaattctcatttccacagt
caaattcaggacagtagcaagggtaggatatacccagagcttgtactgaataaagccctt
gatcgagaggaactgtctgaaattctattaattctcactgcagtggatggtggagtccca
ccaaggtctgggtctgcccaagtccgagtcatcatagtggatatcaatgacaatgcacct
atatttattcagtctcagtatgaggttcagatctctgaaaacatctcagttggatccaag
gttgtcacagtctcagccacagatttagacatagggaattatggagaaatatcttacaca
tttttgcatgcttctgaaaacattcgtaaaacttttcatctcaaagagaaattgggagaa
ctttacttaaaggaaaaagtggattttgagtcaattcaatcttatacaataaatattcaa
gccacagatggtgggggactttcaggagaatgtactgttattgttcaagtgatggattta
aacgataatcctccagagctgaccatgtcttcacttaccagccccatcccagaaaactca
cctgaaattgtgttcgctgttttcagcgtttcagatctagactctggggaaaatggaagg
atggtttgctccatccaagatgaccttcctttttccctaaaaccttctgttgagaactat
tatacactggtaacagaaggagcactggacagagagagaagagctgaatacaatatcacc
attactgtcatggatttggggtccccaaggctcaaaactgaacacaatatcaccatatgg
atctctgacatcaatgataaccctccagtgtttactcagacaacctacaaactgtacctc
caggagaacaacagccctgccctccacattggcagtgtcagtgccaaggatagggactca
ggaatcaatgccaaagtcacatactccctgctgcccccagagaatggagacctgcctctc
ttctcctacatctccatcaactcagacaatggccatctctatgctctgagatccctggat
tatgaaaccatccaagttttccagttcacggtgacagcaactgatggtggttccccatct
ctgagcagccaggctttggttcaagttgtggtacaggatatgaatgacaactctcccttt
gtgctgtaccccttgcagaatggcacaactccctgcaatgacctggtgcccagaactgca
gagccaggttacttggtcactaaggttgtggctgtggatagagactggggacagaattcc
tggctttcctaccagctgctcaaggccactgacccaggactcttcactgtgtgggcccac
aatggggaagttcgaacagcaagacccatcagtgacagagatgccatcaagcagaggctc
ctggttctggtgaaggacaatgggcagcctcctctgtccacagcagccaccttgaatgtt
ctcctggtggatggcttctctgagccctacatgcaatttccagatgcacccaaggagcca
atccagactgattccctcaccacttacttagtcatttccctggcctctgtctcctttctc
ttcctggtctctgttattatggtcattgctattcgcctgtggaagaggaagagggatgcc
actgatgctgctcacttcaatccaaatggtcccttcccaagtcacttggtggatgtcagt
gggacagggactttatctcagagctaccaatatgaggtgtgcctgactactggctcagga
accagtgaattcaagttcctgaaacccattattcccacccttcctcctgccgaaggaaat
gggaaggactctgttgaaaacccacacttatga
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