Monodelphis domestica (gray short-tailed opossum): 100027073
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Entry
100027073 CDS
T01031
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mdo04515
]
100027073
Cell adhesion molecules [BR:
mdo04515
]
Cadherins
Protocadherins
100027073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
He_PIG
InlK_D3
MAP17
Motif
Other DBs
NCBI-GeneID:
100027073
NCBI-ProteinID:
XP_016283967
Ensembl:
ENSMODG00000006343
LinkDB
All DBs
Position
1:333013768..333019778
Genome browser
AA seq
790 aa
AA seq
DB search
MDREEVIILQQRQVLFLFVILGVSGAVSELEQFSVVEEIERGSLVANVAKGLGLKAEELS
NRGARVAFKGNKEYLQLHPKTGDLLLREKLDREDLCGPIEPCVLPFQILLENPFQVVGAE
LRVQDVNDHSPLFLETEMLLKIPESTSPGTVFLLENARDLDVGSNSLQNYKISPNSLFHI
QIRDSSEDQRYPELVLDKTLDREEQSEVILTLTAIDGGVPPRSGSAQVRVIIVDINDNAP
IFIQSQYEVQISENISVGSKVVTVSATDLDIGNYGEISYTFFYPSENIRKTFHLKEKLGE
LYLKEKVDFESIQSYTINIQATDGGGLSGECTVVVQVMDLNDNPPELTMSSLTSPIPENS
PEIVFAVFSVSDLDSGENGRMVCSIQDDLPFSLKPSVENYYTLVTEGALDRERRAEYNIT
ITVMDLGSPRLKTEHNITIWISDINDNPPVFTQTTYKLYLQENNSPALHIGSVSAKDRDS
GINAKVTYSLLPPENGDLPLFSYISINSDNGHLYALRSLDYETIQVFQFTVTATDGGSPS
LSSQTLVQVVVQDMNDNSPFVLYPLQNGTAPCNDLVPRTAEPGYLVTKVVAVDRDWGQNS
WLSYQLLKATDPGLFTVWAHNGEVRTARPISDRDAIKQRLLVLVKDNGQPPLSTAATLNV
LLVDGFSEPYMQFPDAPKEPIQTDSLTTYLVISLASVSFLFLVSVIMVIAIRLWKRKRDA
TDAAHFNPNGPFPSHLVDVSGTGTLSQSYQYEVCLTTGSGTSEFKFLKPIIPTLLPTEKN
KDSIDNNLKE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggatcgggaggaggtgataattctgcaacaaaggcaagttctttttctctttgttata
ttgggtgtgtctggggcagtctcagagctggagcagttttccgttgtggaggagatagag
agaggctccttggtggctaatgtggcaaagggcttgggtctgaaggccgaggaattgtca
aatcggggggccagagtcgctttcaaagggaacaaagagtatttacagctgcatcctaaa
accggagatctgctcctcagagagaaactggaccgagaggatctgtgcggccccattgag
ccctgtgtgctgccattccagatcttattggaaaatccctttcaggttgttggggcagaa
ttaagggtacaagacgtaaatgatcattcaccattgttcttagaaactgagatgcttcta
aaaattcctgagagcacttcccccgggactgtttttctactagaaaatgctagagattta
gatgtaggaagcaacagtctccagaactataaaatcagccccaattccctcttccatatt
caaattcgagatagcagtgaagaccagagatatccagagcttgtactggataaaacattg
gatcgggaggagcaatctgaggtcattttaactctcactgcaatagatggtggagtccca
ccaaggtctgggtctgcccaagtccgagtcatcatagtggatatcaatgacaatgcacct
atatttattcagtctcagtatgaggttcagatctctgaaaacatctcagttggatccaag
gttgtcacagtctcagccacagatttagacatagggaattatggagaaatatcttacaca
tttttttatccatctgaaaacattcgtaaaacttttcatctcaaagagaaattgggagaa
ctttacttaaaggaaaaagtggattttgagtcaattcaatcctatacaataaatattcag
gccacagatggtgggggactttcaggagaatgtactgttgttgttcaagtgatggattta
aacgataatcctccagagctgaccatgtcttcacttaccagccccatcccagaaaactca
cctgaaattgtgttcgctgttttcagcgtttcagatctagactctggggaaaatggaagg
atggtttgctccatccaagatgaccttcctttttccctaaaaccttctgttgagaactat
tatacactggtaacagaaggagcactggacagagagagaagagctgaatacaatatcacc
attactgtcatggatttggggtccccaaggctcaaaactgaacacaatatcaccatatgg
atctctgacatcaatgataaccctccagtgtttactcagacaacctacaaactgtacctc
caggagaacaacagccctgccctccacattggcagtgtcagtgccaaggatagggactca
ggaatcaatgccaaagtcacatactccctgctgcccccagagaatggagacctgcctctc
ttctcctacatctccatcaactcagacaatggccatctctatgctctgagatccctggat
tatgaaaccatccaagttttccagttcacagtgacagcaactgatggtggttccccatct
ctgagcagccagactttggttcaagttgtggtacaggatatgaatgacaactctcccttt
gtgctgtaccccttgcagaatggcacagctccctgcaatgacctggtgcccaggactgca
gagccaggttacttggtcactaaggttgtggctgtggatagagactggggacagaattcc
tggctttcctaccagctgctcaaggccacagatccaggactcttcactgtgtgggcccac
aatggggaagttcgaacagcaagacccatcagtgacagagatgccatcaagcagaggctc
ctggttctggtgaaggacaatgggcagcctcctctgtccacagcagccaccttgaatgtt
ctcctggtggatggcttctctgagccctacatgcaatttccagatgcacccaaggagcca
atccagactgattccctcaccacttacttagtcatttccctggcctctgtctcctttctc
ttcctggtctctgttattatggtcattgctattcgcctgtggaagaggaagagggatgcc
actgatgctgctcacttcaatccaaatggtcccttcccaagtcacttggtggatgtcagt
gggacagggactttatctcagagctaccaatatgaggtgtgcctgactactggctcagga
accagtgaattcaagttcctgaaacccattattcccacccttcttcccactgagaaaaat
aaggattccattgacaacaaccttaaggaatag
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