Monodelphis domestica (gray short-tailed opossum): 100027074
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Entry
100027074 CDS
T01031
Symbol
NELFCD, TH1L
Name
(RefSeq) negative elongation factor complex member C/D
KO
K15181
negative elongation factor C/D
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100027074 (NELFCD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdo03021
]
100027074 (NELFCD)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
100027074 (NELFCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
100027074
NCBI-ProteinID:
XP_001377475
Ensembl:
ENSMODG00000016598
UniProt:
F6ZD99
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All DBs
Position
1:complement(483835301..483851718)
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AA seq
592 aa
AA seq
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MLFSRGGVAAVMDEDYFGSAAEWGEDADGAQQDDDYGEGEDDAEVQQECLHKFSTRDYIM
EPSIFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENH
LKSLLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKL
ISDAGYQGEITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMLCHGEHTY
LFAQSMMSILAQEEQGGSAVRRIAQEVQRFAHEKGHDASQITLALGTAASYPRACQALGA
MLSKGALNPADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKFIH
ILAYAASVVETWKKNKRVSINKDELKSTSKAIETVHNLCCNENKGASELVAELSTLYQCI
RFPVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFE
TEHSQLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDISLIRYFVTEVL
DVIAPPYTSDFVQLFLPILENDSIAGTIKTEGEHDPVTEFIAHCKSNFIMVN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgttgttctctcggggtggtgtcgccgcagtcatggacgaagattatttcgggagcgct
gccgagtggggagaagatgccgacggtgcccagcaggatgatgattatggagaaggagaa
gatgatgcagaagtccaacaagaatgtttgcacaaattttccacccgggattatataatg
gagccttccatattcaacacactcaaaaggtattttcaggcaggaggctctccagagaat
gtaatccaactcttatcagagaactatactgctgtggcccagactgtaaaccttttggct
gagtggctcattcagacaggtgttgagccagttcaagttcaggaaactgtagaaaatcac
ttgaaaagtctattgatcaaacactttgacccccgaaaagcagattctatctttactgaa
gaaggagagacaccggcatggcttgaacaaatgattgcacatactacttggagggatttg
ttttacaaattagccgaagcacatccagactgtcttatgcttaattttacagttaagctt
atttctgatgcaggatatcaaggagagataaccagcgtatccactgcttgccagcaatta
gaagtcttttctcgagtgctccgtacttctctggctacaattttagatggaggagaagaa
aaccttgaaaaaaatctccctgagtttgctaaaatgctgtgtcatggagagcatacctat
ctctttgcccagtcaatgatgtctatattggcccaagaagaacaaggagggtctgctgtg
cgtagaatagctcaagaagttcaacgatttgctcatgagaaaggccatgatgcaagtcag
atcacgcttgcattaggtacagcggcttcataccccagggcttgtcaggctcttggtgcc
atgttatcaaaaggagctctgaatccagctgacattacagtcctgtttaagatgtttaca
agcatggacccacctcctgttgaattgatacgggttccagctttcttggatctatttatg
cagtcactctttaaacctggggccaagatcaatcaggaccataaacacaagttcatccac
atattggcctatgcagctagcgtggtggagacctggaaaaagaacaagagagtgagcatc
aataaagatgaattgaagtcaacttctaaagctattgaaactgttcacaatttatgttgt
aatgagaacaaaggtgcctctgaattagtggccgagttgagtacactttatcagtgcatc
aggtttccagtggtagcaatgggtgtactaaagtgggtggattggacagtgtcagaacca
cgctattttcagctccagactgatcatacaccagtacatttggccttactagatgagatt
agcacctgccaccagctcctccatccccaagtcctgcaattgttggttaaattatttgag
acagagcactcccagctggatgtaatggaacagcttgaactgaagaaaaccctgctggac
agaatggttcatctgctgagtcgaggttatgtattgcccgttgtcagttacatccgaaag
tgtttggagaagttggacactgacatctccctcattcgctattttgttactgaggtcttg
gatgtgattgctcctccctacacttctgactttgtgcagctctttcttcctattctagag
aatgacagtattgcaggtactattaaaacagaaggagaacatgaccctgtgacagagttc
atagcccactgcaagtctaacttcattatggtaaactga
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