Monodelphis domestica (gray short-tailed opossum): 100027111
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Entry
100027111 CDS
T01031
Symbol
SIX4
Name
(RefSeq) SIX homeobox 4
KO
K15615
homeobox protein SIX4
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100027111 (SIX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100027111 (SIX4)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
100027111 (SIX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
NTP_transf_3
Motif
Other DBs
NCBI-GeneID:
100027111
NCBI-ProteinID:
XP_003339515
Ensembl:
ENSMODG00000008646
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All DBs
Position
1:complement(262228589..262243122)
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AA seq
807 aa
AA seq
DB search
MSSSSPTDQIASAVEIKQENGMEATPEGKEAPPEVVGGPVAALNPPPADPFPMEPMGSPT
AANGEEGAAAAVAAAAAAAAAAAAAAVAAAGAAADQVQLHSELLARNHQAAAAAAAAAAA
AAAAAAAQTPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALV
AFHQGIYPELYSILESHSFESANHPLLQQLWYKARYSEAERARGRPLGAVDKYRLRRKFP
LPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRR
QRDRNPSETQSKSESDGNPSTEDESSKGHEDLSPHSLSSSSDGVTNLSLSSHLEPVYMQQ
IGNTKISLSSPGVLLNGGLVPASTSPVFLNGNSFIQGPNSVILNGLNVGNTQTVTLNPSK
TSSSIVNNGASMTDILGSPSEDVKDFKVLQSSTTNSAATTSYNPSVPASFPGLIPSTEVK
REGIQTVASQDGGSVVTFTTPVQINQYGIVQIPNSGTNGQLLNGSIGFSPLQLPPVSVAA
SQGNISVNSSTSDGGTFTSDSTTVQQGKVFFSSLAPSALVYTVPNSGQTAGSVKQEALER
NLVFSQLMPVNQNTQVNVNMSSENISSSGLHPMASSLVNVTPTHNFPLTPPALLNATELN
ADISESQPLSTPVTSTSTVISVSNTNYATLQNCSLITGPDLMSISMTQPALGEIVPAAGD
RVDHSSPAVHEDFVREHRLVLQSVPNIKEDFIPSSEDKSTSNLLMLDSKSKYVLDGMVET
VCEELETDKKELAKLQTVQLDQDMQDL
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcccccacagaccagatcgcaagtgctgtggagataaaacaagaaaat
gggatggaagccacccccgaaggaaaggaggcgccaccagaagtggtggggggacccgtg
gcagcactcaatcctccccctgccgaccctttccccatggagcccatgggttccccgact
gctgccaacggagaggagggggcggcggcggctgtagcggcagcagctgcggcggcggcg
gcagcggcggcagcggctgtggccgccgcgggagctgcggcggaccaggtacaactccac
tctgaacttctagcccgaaaccaccaagctgccgcggccgctgctgccgccgccgccgct
gccgccgccgccgctgcagcccagaccccgctggccttctccccggaccacgtcgcctgc
gtttgcgaagcattacagcaagggggaaacttggatcgcctggcccggttcctgtggtcc
ctgccccagagcgacctgctacgtggcaacgagagcctcctaaaagcccgagccctggtc
gccttccaccagggcatctacccagagctctacagcatcctcgagagccacagcttcgag
tcggccaaccacccacttctgcagcagctctggtacaaggcgcgctacagcgaagcggag
agagcgcgaggccggcccttgggagcggtggacaagtacaggctgagaaggaaattccct
ctgccccggaccatctgggacggcgaggagacggtgtattgtttcaaggagaagtcgcgc
aacgcgctcaaggagctgtacaagcagaatcgttacccgtccccggcagagaagcggcac
ctggccaagatcaccggcctctccctcactcaggtcagcaactggttcaagaaccggagg
cagcgcgaccggaacccctccgagacccagtccaaaagtgagtcagatggtaatcccagc
actgaagatgagtccagcaagggacatgaggatttatctcctcattcactctccagttca
tccgatggagttaccaacttgagcctttccagtcacctggaacctgtatatatgcaacaa
attggaaacactaaaatatcattaagttcccctggtgttttactgaatggaggcttagta
cctgcaagtacttcacctgtcttccttaatggcaattcctttattcagggacctaacagt
gtaatccttaatggactaaatgtaggaaatacacaaactgtgactttaaacccatcaaaa
acttcatcaagcattgtcaacaatggtgcatctatgacagacatcctcggatctccttca
gaggatgtaaaagacttcaaagtcctccagagttccacaacaaattctgcagcaacaaca
tcctacaaccccagtgtccctgcttcatttcctggtttgatacctagcactgaagttaaa
agggaaggtatacaaacagtggcttctcaagatggaggttctgtggtgacttttacaaca
cccgtacaaataaaccagtatggtatcgtacagatccccaattcaggaacaaatggccag
ttgcttaatggaagcattggattctctcctctgcagctgcctcctgtctcagtggcagct
tctcaaggtaatatttcagtaaattcaagcacttctgatggggggacatttaccagtgac
tctaccacagtacagcaaggaaaggtcttcttcagctctcttgcgcctagtgcactagtc
tacacagttccgaattcaggtcaaacagcaggatctgttaaacaagaggccttggaaagg
aaccttgtgttttctcaattaatgccggtcaatcaaaacacacaagtcaatgtaaacatg
tcttctgaaaatatctcgagcagtggccttcatcctatggcctcatcattagttaatgta
actccgactcacaattttcccctcactccccctgctctactaaatgcaacagagctaaat
gctgatatttctgagagccagcccttgtctacacctgtaacgagcacatctactgtgata
tctgtcagcaacactaactatgcaactcttcagaactgttcccttattactggtccagac
ctaatgtcgatttcaatgacccagcctgcccttggggagatcgttccagcagctggagac
cgtgtggatcactcctccccagcagtacatgaggattttgtcagagagcaccggttagtt
ctgcaatccgtacctaacataaaggaggatttcataccaagttctgaggacaaatcaaca
agcaacttattgatgctggattccaaatccaaatatgtcctagatggcatggtcgaaaca
gtctgtgaagaactggaaacagacaaaaaagagcttgccaagctccagactgtccagttg
gatcaagatatgcaagatttataa
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