Monodelphis domestica (gray short-tailed opossum): 100027137
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Entry
100027137 CDS
T01031
Symbol
USP42
Name
(RefSeq) ubiquitin specific peptidase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mdo01002
]
100027137 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdo04121
]
100027137 (USP42)
Enzymes [BR:
mdo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100027137 (USP42)
Peptidases and inhibitors [BR:
mdo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100027137 (USP42)
Ubiquitin system [BR:
mdo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100027137 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
100027137
NCBI-ProteinID:
XP_001377522
Ensembl:
ENSMODG00000008055
LinkDB
All DBs
Position
6:complement(62394701..62538870)
Genome browser
AA seq
1357 aa
AA seq
DB search
MTIVDKVSESSNPSACQNQPGSSVAPSLGDMDSGSASWGAVSSLTDIPKHKISLGPVPGA
AIYSNSSISDKPKPSAQKDQSTGDGIAPPQKVLFPAEKICLKWQQSHRVGAGLQNLGNTC
FVNAALQCLTYTPPLANYMLSHEHSKICHEQGFCMMCTMQAHITQALNNPGNVIKPMPVI
NDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSTKLDRHSQATTLVCQIFGGYLRS
RVKCMNCKGVSDTFDPYLDIPLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFSGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVL
VHTGFSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVLNQQAYVLFYIRSHDVKNGGE
HTHSIHTPGQSSPRPVINQRVVSSKQTVSGFIGPQLPPHMIKSSNHLNGTGPLKETPSCS
VASASSSNLNRASPAPASTSIQNWTVNRPSIIPEPPKKQKITISIHNKLPVRQGQSQPNL
HNNSLENLSKSIPSSTITNSSALQSTSNASTMSVATKVSKQITPSESCSKPVMNGKSKLT
SSVLVPYGAESSEESDEESKGLGKENGHAKPLNGLLTGNGVGMLPNTCSSCQDAEDDEAS
HHELPETVTVNGANSIENSDPKENGLSFDDPTCQVKPAKHSENPFSKTNGLHGKLMPTPL
PPLPEDRIVESFRFSNKLKSLTDDISSTGNEKSPEEHGTELVVGSNSSASFEQLEKVTSS
LSCKIKNNFPPSDPNVIATKEEIPESIIAKTEESIPNVISHCNANKKAIGDDQFPKQCDP
GNFTDEKLLLSQEVKGTLKENSLNSAPVDTVEKLSQTPSNNFDTECDSNKLLVFISTEKC
KETKDLSKSIDMSANELSATQLDKIVENHYSKGSTEQSNSERCEESKVRQKVQSNSPVKE
KGDSPRKVDRGHHHNRREHSSSGERTKQSRSKTETHYYKKRVSYSKERTKKGRHKSEHCN
GSKYKPFHNESSSPDSRSLGKHNHYRSRSRGKSDQERGRYYHSKSERSWSREKYYPDGMR
RWDKYRYYSDYYPYSSREGREWKPSHSDREYDKASQYNSRSHKDYYKSKWVHEPAPKEKE
RHHLNSNKVDLSHCSSLPQHPEKYSHDKIALENSSNLCSQFHEYESVKMRKRKYDSIENS
DSDIEKKIPKPLQNEPVEEQKVKKHKKSKKKKKSKDKHRARSCKHHQELDLSVVNSKADL
RKHKKKKKKKKKHAKKSEDYIEHSDLHVLKISCSETDNKTWEKKDKSPIKDGLPSEDYQK
FNKLSHEEDDDHPEKTKHLRMESQDHKCHPAEYGQGE
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgactatagttgacaaagtatctgaatcttccaacccatcagcttgtcagaatcaacct
ggcagctcagtggcaccttcacttggagacatggactcaggctctgcaagttggggagct
gtatcttctttgacagacatccccaaacataaaatttctttaggaccagtacctggtgct
gcaatatattctaattcatctatatctgacaaaccaaagccatcagcacaaaaagatcaa
tctacaggtgatggcattgcacctccacagaaggtcctttttccagctgaaaaaatttgt
ctaaagtggcaacaatctcacagagttggagctgggctccaaaatctgggcaatacgtgt
tttgtcaatgctgcattgcagtgtttaacatatacgccacctcttgccaattatatgtta
tctcatgaacactccaaaatatgccatgagcaaggattctgtatgatgtgtaccatgcag
gcccatattacccaggcactcaataatcctggcaatgtcatcaaaccgatgccagtcatc
aatgatcttcgacgtatagctaaacacttccgttttggaaaccaggaagatgcccatgaa
tttcttcgatatactgttgatgcaatgcagaaagcatgcctgaatggcagcactaaattg
gaccggcactcccaagctaccactcttgtttgtcaaatatttggaggctacctgaggtct
cgagtaaagtgtatgaactgcaaaggagtttctgataccttcgatccataccttgatatt
ccattggaaataaaggctgcccagagtgtcaacaaggccttggaacagtttgtgaagcct
gagcaattagatggagaaaattcctataaatgtagcaagtgtaaaaagatggttccagct
tcaaagaggtttactatacatagatcatctaatgttcttaccttatctttgaaacgtttt
gcaaattttagtggtggaaaaattgccaaggatgtgaaatatcctgagtatcttgatatt
cgaccatatatgtctcaacctaatggagaaccaattatttatgttctatatgcagtgtta
gtgcatactggttttagctgtcatgctggtcattactactgttacataaaggctagtaat
ggacagtggtaccagatgaatgattccattgtttccaccagtgacatcagatcagtgctt
aatcagcaggcttatgtcctcttttatatcaggtcccatgatgtgaaaaatggaggtgaa
catactcattccattcatactccaggacagtcttctcctcgaccagtgatcaatcaacgg
gtagttagtagtaaacagactgtatcaggctttattggaccacaacttcctcctcatatg
ataaagagttctaatcacttaaatgggactggaccattgaaggaaactccaagttgttct
gtggcaagtgctagtagttctaatttaaacagagcaagtcctgctcctgcttcaacttct
attcaaaactggacagttaacagaccttcaattattcctgagcctcctaagaagcaaaaa
atcactatcagtattcataacaagttgcctgttcgacaaggtcagtctcaacctaatctt
cacaacaattctttagaaaacctcagcaagtccattccctcatctaccattactaattct
tctgcattacaatctacctcaaatgcatcaacaatgtcagttgctactaaagtatcaaaa
cagatcacacctagtgaatcttgttccaagccagtaatgaatggcaagtccaagctcacc
tccagtgtgctggtcccttatggtgcagagtcttcagaagaatctgatgaggagtcaaag
ggactgggtaaggagaatggccatgcaaaacctcttaatggacttctgactggaaatgga
gttggtatgctcccaaatacttgttcttcctgtcaagatgctgaagatgatgaggcttct
catcatgaactgccagaaactgtgacagtaaatggtgctaatagtatagagaatagtgac
cctaaagaaaatggactgtcatttgatgatcccacttgccaagtcaaacctgctaaacat
tcagaaaatcccttttccaagacaaatggattacatggaaagttgatgcctactcccttg
cctccacttccagaagatagaatcgtagagtctttcagattcagcaacaaattaaaaagc
ttgactgatgatataagttcaactggaaatgagaaatcgcctgaagaacatggtaccgaa
cttgtggttggtagcaacagttcagcttcctttgaacaactagagaaagttacttcaagt
cttagctgcaaaataaagaataactttccaccctcggatcctaatgtcattgctaccaaa
gaagaaattcctgaaagtattatagcaaaaacagaagagtctattcctaatgtcattagt
cattgtaatgctaacaagaaagccattggagatgatcagtttcccaaacagtgtgatcct
gggaatttcacagatgaaaagctcctactatcccaagaagtaaagggaacattaaaggag
aattcactgaactctgcaccagtggatacagtggaaaaattgagccaaactccctcaaat
aattttgacactgaatgtgatagtaataaactcttagtatttattagtactgaaaaatgc
aaagaaacaaaggacctttctaaaagtatagacatgtctgctaatgaactgtctgccacc
caattagataaaattgtagagaatcattattcaaaagggagcactgaacaaagtaatagt
gaacgatgtgaagaaagtaaagttagacaaaaagttcagagtaattctccagttaaggaa
aaaggtgatagccccagaaaagtggacagagggcatcaccataaccgaagagaacattct
tccagtggagaacgaacaaagcaaagcaggagcaaaacagagacacattattacaaaaaa
agagtctcctatagcaaagagaggaccaaaaaaggccgccacaaatcagaacactgtaac
ggaagcaaatataaaccgtttcataatgaaagcagtagccctgacagtaggtccttagga
aaacataaccattatcggtccagaagtagaggaaaatctgatcaggaaaggggtagatat
taccattctaaaagtgaacgatcttggagtcgagagaaatattatccagatggaatgaga
agatgggacaaatatagatattatagtgattattatccttattcttcaagggagggtaga
gagtggaagccatctcacagtgatcgggaatatgacaaagcaagtcagtacaatagtaga
tcacacaaggactattataaaagcaaatgggttcatgagccagcacctaaagagaaagaa
aggcatcacttgaacagtaataaagtagacctctcccattgttcatctcttcctcaacat
cctgaaaaatattctcatgacaaaattgcacttgaaaacagttcaaatctttgtagtcag
tttcatgagtatgaaagtgtgaaaatgaggaaaaggaaatatgatagcatagaaaatagt
gacagtgacatagaaaagaaaatccccaaacccttacaaaatgagccagtagaggagcag
aaagtaaagaagcacaaaaaatcgaaaaagaaaaagaaatccaaagacaaacacagagca
agaagctgcaagcatcatcaggaattggatctttctgtagtcaactccaaagctgacctt
cgcaaacacaaaaagaagaagaagaaaaagaagaaacatgcaaaaaaatcagaggactat
attgaacattcagatcttcatgtactcaaaatttcctgctctgagactgataacaaaact
tgggagaaaaaggacaaatctcccatcaaagatggcttgccatctgaggactaccagaaa
tttaataaactttctcacgaggaagatgatgatcaccctgagaaaaccaaacacttaaga
atggaaagccaggatcataaatgtcacccagctgagtatggccagggtgaatga
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integrated database retrieval system
