KEGG   Monodelphis domestica (gray short-tailed opossum): 100027158
Entry
100027158         CDS       T01031                                 
Symbol
DDB1
Name
(RefSeq) damage specific DNA binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03420  Nucleotide excision repair
mdo04120  Ubiquitin mediated proteolysis
mdo05161  Hepatitis B
mdo05170  Human immunodeficiency virus 1 infection
mdo05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100027158 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100027158 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100027158 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100027158 (DDB1)
   05161 Hepatitis B
    100027158 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdo04121]
    100027158 (DDB1)
   03400 DNA repair and recombination proteins [BR:mdo03400]
    100027158 (DDB1)
Ubiquitin system [BR:mdo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     100027158 (DDB1)
DNA repair and recombination proteins [BR:mdo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100027158 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100027158 (DDB1)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Beta_propel
Other DBs
NCBI-GeneID: 100027158
NCBI-ProteinID: XP_007497762
Ensembl: ENSMODG00000020353
LinkDB
Position
5:complement(299395194..299416063)
AA seq 964 aa
MVDWIWNGPPGTARHLCEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQES
ITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVT
LKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNL
GPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSD
SGRETDDTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASV
RLVGQDPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEH
EVACLDITPLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTF
ESSHYLLCALGDGALFYFGLSIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRP
TVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVP
LYESPRKICYQEMSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSKLFSSSTA
PHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDANTYFVVGTAMV
YPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAE
KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSA
VEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFINVFCHGSLVMQN
LGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSF
HTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEEL
TRIH
NT seq 2895 nt   +upstreamnt  +downstreamnt
atggtagattggatttggaacggacccccagggacggcacgtcatttgtgcgaagtgtct
cttcgggagaaggaattcaataaaggcccctggaagcaggaaaatgtggaggcagaagct
tcaatggtgatcgcagtccccgagcctttcggaggtgcgatcattattggccaggagtcc
atcacctaccacaacggcgataagtacctggccattgcccctcccatcatcaagcaaagc
acgattgtgtgccacaatcgagtggatccaaatggatctcgatacctgctgggagacatg
gaaggccgcctcttcatgcttctcctagagaaagaggagcagatggacggcaccgtgacc
ctcaaggatctccgtgtggagcttcttggagagacctccattgccgaatgcttgacgtac
ctcgacaacggggttgtgttcgttggctctcgccttggcgactctcagctcgtaaaactc
aatgtggacagcaatgagcaaggctcctatgttgtggccatggagacctttaccaatcta
ggccccatcgtggacatgtgtgtggtggacctggagaggcagggccaagggcagctggtc
acatgttcaggggcttttaaggaaggctctttgcggatcatccggaacgggattgggatc
cacgaacatgccagcattgacctgccaggcatcaaaggcttatggcctctgaggtccgac
tccggccgagaaacggatgacacgttggtgctgtcctttgtgggccagacgagagttctg
atgctgaacggagaagaagtggaggagaccgagctgacgggcttcgtggatgatcagcag
acttttttctgtgggaatgtggctcaccagcagctgatccagatcacctcggcctctgtg
cgcctggttggccaggacccaaaagcgttagtgagtgaatggaaggaaccccagggcaag
aacatcagcgtggcctcgtgtaacagcagccaggtggtggtggctgtgggcagggccctc
tactatctgcagattcaccctcaggagctccggcagatcagccacacggagatggagcat
gaggtggcgtgcttggacatcacccctctgggggacagcaacgggatgtctcctctctgt
gcgattggcctctggaccgacatctcagcccgcattttgaagcttccctctttcgagctc
ctgcacaaggagatgcttgggggagagatcatccctcgatccatcctgatgaccaccttc
gagagcagccactacctgctctgcgccttgggagatggcgccctcttctacttcgggctc
agcatcgagacgggcttgttgagcgaccgcaagaaggtgactctggggactcagcccaca
gtcctgagaacgttccgctccctctccaccaccaatgtctttgcttgttctgaccgcccc
actgtcatctacagcagcaaccacaagttagtcttctccaatgtcaacctcaaggaggtc
aactacatgtgtcccctcaactcagatggctatcctgacagcctggccttggccaacaat
agcaccctcaccatcggcaccattgacgagatccagaagctgcacatccgtacggttcct
ctctacgagtcccccagaaagatttgctaccaggaaatgtcgcagtgctttggggttctc
tccagtcggatcgaggtgcaggacgccagcggagggacgacagccctgaggcccagtgcc
agcacccaggccttgtccagcagcgtcagttccagcaagctgttctccagcagcacagcc
cctcacgagacgtccttcggagaggaggtcgaggtgcacaaccttctcatcatcgaccag
cacacctttgaagtgcttcatgcccaccagttcctacagaacgaatatgccctcagcctg
gtctcctgcaagcttggcaaagatgccaacacctacttcgttgtgggcactgccatggtg
tatcctgaagaggcagagcccaaacaggggcgaatcgtcgttttccagtactctgacggc
aaactgcagactgtagcagagaaggaagtcaaaggtgctgtgtattccatggtggaattc
aatgggaagctcctggccagcatcaacagcacggtgcgactctacgagtggaccgcagag
aaagaacttcgcacagagtgcaatcactacaacaacatcatggccttgtacctgaagaca
aagggggatttcattctggttggcgacttgatgcgttcagtgctgcttctcgcctacaag
cccatggagggcaactttgaggagattgctcgggactttaaccccaactggatgagtgct
gtagaaatcttggatgatgacaattttctgggggctgagaatgcttttaacttgtttgtg
tgtcagaaggatagtgctgccaccactgatgaggagcgacagcatctgcaggaggtgggg
ctcttccacttgggggaatttatcaacgtattctgccacggctcactggtgatgcagaac
ctgggggagacgtccaccccgacgcaaggctctgtgctctttggcactgtcaacggcatg
atcggcttggtgacttccctgtcagaaagctggtacaacctccttttggacatgcagaac
cgactcaacaaagtcatcaaaagcgtcggcaagatcgagcactccttctggagatcgttc
cataccgagcgcaagacggagccagccacaggtttcattgacggggacctgatcgaaagt
ttcctggatatcagccgccccaagatgcaagaagttgtggccaacttacagtatgatgac
ggcagcggtatgaagcgagaggccaccgcagatgacctcatcaaagttgtggaggagctg
actcggatccattag

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