Monodelphis domestica (gray short-tailed opossum): 100027257
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Entry
100027257 CDS
T01031
Symbol
PCDHB3
Name
(RefSeq) protocadherin beta-16
KO
K16494
protocadherin beta
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mdo04515
]
100027257 (PCDHB3)
Cell adhesion molecules [BR:
mdo04515
]
Cadherins
Protocadherins
100027257 (PCDHB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
RET_CLD4
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
100027257
NCBI-ProteinID:
XP_001377600
LinkDB
All DBs
Position
1:333088088..333091300
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AA seq
796 aa
AA seq
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MEPERKAIPLQRQVFFLFFLLWVSEAGGDLGRFTVAEETESGSFVTNVAMALGLQLGDLS
ARGARIASKGNKQHLQLNRETGDLNLKEKLDREELCGSTEPCLLPFQILLENPLKIVRAE
LRVEDINDHSPVFLESEMLLRIPENSIPGSVLPLKNAEDLDVGPNAVQNYTLSPNYHFHL
QTHSRGEGRKFPELVLSKALDREEQAEFILILTAVDGGSPPRSGTARVRIVVVDINDNAP
LFVQPRYEVQVPENNSIGFLVVTVSARDLDAGNYGEILYSLFHSSEEISKTFEINPISGD
IRLRKKLDFETIQRYEIDVEGTDGGGLSGKCTVIIQVTDLNDNAPELAMSSLTSPIPENA
PEMVVAVFSISDLDSGENGRLVCSIQEDIPFTLQPSIENFYTLITEGGLDRESKAQYNIM
ITVMDLGFPRLQTVHNITVFISDVNDNPPVFTQTAYIFYLEENNTPASHLGNVSANDRDS
GTNAKVTYSLQPSKSENLSLSSYISINSDNGHLYALRSLDYEAIQTFQFIVKATDGGSPA
LSSQTLVQVVVLDENDNSPFVLYPLQNGTAPCNDLVPRTAEPGYLVTKVVAVDGDSGQNS
WLSYQLLKATDPGLFTIWAHNGEVHTVRPISDRDAIKQRLLILVKDNGQPPLSTAATLNV
LLVDGFSEPYVKRQESIKESTQIDSLTLYLIISLASVSFLFLISAILFTVLHLWKKKRDS
SDMGHLRASAPFPSRLVDINSTGTLSHSYQYEVCLANDSGTNEFKFLKPIIPSLHAHHDG
KDSEENPTFRNSLDFS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgaaaggaaagcgattccactgcagaggcaagtcttctttcttttttttttg
ctatgggtgtctgaggccggtggtgacctgggaaggtttacagtggcggaggagactgag
agcggctcctttgtgacgaatgtagcaatggccctggggttacagttaggggatctgtca
gccagaggggcccgaatcgcttccaaaggaaataagcagcatttacagctaaatcgagaa
actggagatctgaaccttaaggaaaaattggaccgggaggagttgtgcggctccacagag
ccctgtctgctgccttttcaaatcttactggaaaaccctttaaagatagttcgggctgaa
ctgagagtggaagacattaatgaccattcgcccgtgttcctagaatcggagatgctcttg
agaatccccgaaaatagtattccgggttctgtcttgcctctgaaaaacgcagaagattta
gacgtaggacctaacgctgtacagaactataccctcagccctaactaccatttccacctt
cagactcacagccgaggagaaggcaggaaattcccagagctggtgttaagcaaagccctg
gaccgtgaggagcaggcagagtttatactaatcctcacggcagtagatggtggatccccg
cccaggtctgggacagctcgcgtccgcattgtggttgtggacattaatgataatgctcct
ttatttgttcaacctcgatatgaggttcaggtcccagagaacaattccattggcttcctg
gttgtcaccgtctctgctagagacttggacgctggaaattacggagagatactatattcc
ctttttcatagttctgaagaaattagcaaaacttttgaaataaatcccatctcaggagat
attagactcagaaaaaaactagattttgagacaattcaacggtatgagatagatgttgaa
ggaactgatggcggtggcctttctgggaaatgtactgtaattattcaggtgacagatctg
aacgacaatgcccctgaactggctatgtcgtcacttaccagtcccattccagagaatgca
cctgagatggtggtggctgttttcagtatttcagatttggattcaggagaaaatggaagg
ctggtttgctccattcaggaagatatcccctttaccctgcaaccttccatagaaaatttt
tataccttgataacagaaggagggctggatagagaaagtaaggcccaatataacatcatg
attactgtcatggatttggggtttccgaggctccaaacagttcataatatcacagtgttt
atctcagacgtcaatgacaacccaccagtatttactcagacagcatatatattctacctg
gaggagaacaatactcctgcctcacacctgggcaatgtcagtgccaatgacagggactct
gggactaatgccaaggtaacctattcattgcagccttccaagtctgaaaatctgtccctc
tcttcctatatctccatcaattcagacaatggacatctctatgctctgagatccttggat
tatgaagccatccaaacttttcagttcattgtaaaggcaactgatggagggtccccagcc
ctgagcagtcagactttggttcaagttgtggtcctggatgagaatgacaactcacccttt
gtgctatatcctttgcaaaatggtacagctccctgcaatgacctggtgcccaggacagca
gagccaggttacctggtcaccaaagtggtagctgtggatggagactcaggacagaattcc
tggctttcctaccaacttctcaaggccacagacccaggactcttcaccatatgggcccat
aatggggaagttcatacagtgaggcccatcagtgacagagatgccatcaaacagaggctc
ctgatattggttaaggacaatgggcaaccacctctgtccacagcagccacactaaatgtg
ctcctggtggatggattctctgagccatatgtaaaacgccaagaatctatcaaagaatca
acccagattgattctctcactctttacttgatcatttctttggcttctgtctcttttctc
ttcctgatctctgccatcctgttcactgtactacacctatggaaaaagaaaagagattct
tcagacatgggccaccttagagccagtgcccccttcccaagtcgtttagtagatatcaat
agcactgggaccctgtcccatagctaccagtatgaggtgtgtctggccaatgattctgga
accaatgaatttaagtttttgaagccaattattcccagcctccatgctcaccatgatggg
aaagattcagaggaaaatcctaccttcaggaatagcttagatttcagttag
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