Monodelphis domestica (gray short-tailed opossum): 100027443
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Entry
100027443 CDS
T01031
Symbol
PRDM13
Name
(RefSeq) PR/SET domain 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100027443 (PRDM13)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100027443 (PRDM13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_7th_ZNF462
zf-BED
zf_MP81
Motif
Other DBs
NCBI-GeneID:
100027443
NCBI-ProteinID:
XP_001377731
LinkDB
All DBs
Position
2:361507574..361546450
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AA seq
742 aa
AA seq
DB search
MHTNRAAAISVSAESCIPAGLRLGPVPGIFKLGKYLSDRREPGPKKKVRMVRGELVDESG
GSPLEWIGLIRAARNTQEQTLEAIADLPGGQIFYRALRDVQPGEELTVWYSNSLAQWFDI
PTTATPTHDEKGEERYICWYCWRTFRYPNSLKAHLHFHCVLSGGGGGRAFLHHEHAARPT
AAPTLDGFRLSPKPAAPELAVAAPAASLRNHSQGPPPPHQACGAREGIKREVSSSTSPPP
PGKLGASVKKTGAFGREEQERALDMSVGPGRGHGHFLGMVGGSPAGSGSLAFYPGARSAF
KPTGLAKAAAAAVAVHGTDSYREDNGAGAGKAGGGLGFGKFLGGVKLGGRPGHEPLVASG
GGGHHHHHHHHSHHHAKCLHTGDGPPQPPPPPPPPPPPPVLPCAGALRGFPLFSGHLEEA
SAFKHVERALPAGGLPSGRYAQVPPAAGLHLERFSLPPFEAGGLKSYPGECSHLPAVMPA
FTVYNGELLYGSSTAAAAAAAYYPLKLHFGSLLKYPESMSYFSGPAAAAAAAAAAAAAAA
ALNPGELGSLASIDREIAMHTQQLSEIAAEKSRGRLDGALQPIGVPGGGGGGGGGSGGGG
GSGVGGKPKTGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCLRPFGDPSNLNKHIR
LHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQSVHAKASEEQDCTQGYPPEPGDPKS
DNESDVDVCFTDDQSDQETGAQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgcacacaaacagggctgccgccatcagcgtgagcgcagaaagctgcatcccagccggg
ctgcgcttaggtcctgtgcccggcatcttcaaactgggcaaatacttgtcagaccgcagg
gagccaggacccaagaaaaaggtgcgaatggtgagaggggaattagtggatgaatctgga
ggatctcctttggagtggatagggttaatccgagcggccaggaatactcaggaacagact
ctggaagctattgcggacttgccaggaggacagatcttctatagggcgcttagagatgta
caaccaggtgaggagctgaccgtgtggtattcgaactccttggctcaatggttcgacatc
cccaccaccgctactccaacgcacgatgagaaaggggaggagcgctacatctgttggtat
tgctggaggacttttcggtaccccaacagcctcaaggcgcacctgcatttccattgtgtg
ctcagtggcggcggcggcggtcgagcctttctgcaccacgagcacgcggcccgtccaacc
gctgccccgaccctcgacggtttccgcctctccccgaaacccgcggctcctgagctcgct
gtggccgcccccgcggcctctctgcgcaaccactcgcaaggaccgccacctcctcaccag
gcctgtggggcgcgcgagggtatcaagcgcgaggtgtcctcgtctacctcgccgcccccc
cctggcaaactaggggcttcggtcaagaagacaggtgcgttcggtcgcgaggagcaggag
cgcgcactggacatgagtgtgggaccaggcagggggcatggtcacttccttggtatggta
ggcggttccccggccggttccggcagcctggctttctaccccggggcgcgctccgccttc
aagcccacgggccttgccaaggctgcggctgcagccgtagctgtccatggaaccgactcc
tatcgtgaggacaacggggcaggtgccggaaaggccggaggcggtctgggttttggcaag
ttcttgggcggggtcaagctcggcggccgtccggggcatgaacccctggtagcgagtgga
ggaggaggtcaccaccatcatcaccaccaccacagccaccaccacgccaaatgcctgcat
acgggagacggccctccgcagcctcctccacccccccctccgcctccgcctcctcccgtg
ttgccctgcgccggagcccttcggggtttcccgctcttctctggtcacctggaagaggcg
tcggcattcaagcacgtggagcgggccctgccggccggcgggcttcccagtggccgctac
gcccaggtacccccggctgctgggctgcatctggagcgcttctcgctccctccttttgaa
gccgggggtcttaagtcttaccccggagaatgtagccacctcccggccgtcatgccggcc
ttcaccgtgtataacggggaactgctgtatggctcttcaacagccgcagcggccgctgcc
gcttactaccctctcaagctgcacttcggcagcctgctcaaatacccggagtccatgtct
tacttcagcggacccgctgcggccgcggctgcagctgctgctgcggcggccgcggccgcg
gctctgaatcccggcgagctgggctctctggccagcatcgaccgggagatcgccatgcat
acgcagcagctgtccgagattgcagccgagaaaagccgcggtcgcctggacggggcgctg
cagcccatcggggtcccaggcggaggcgggggaggtggaggaggtagtggcgggggtggg
ggctctggggtgggcgggaagccaaagacaggacacctgtgcctgtactgcggcaagtta
tattcccgcaaatacgggctcaagattcacatgcggactcacacgggctacaagcccctt
aagtgtaaagtgtgcctacgtccctttggcgatcctagcaatctcaacaagcacatcaga
ttgcacgccgaaggtaacactccgtatcgctgtgaattctgcggaaaggtgttggtccgg
cgccgagatttggagagacacgtcaagtcccgacacccaggccagagcgtgcacgccaag
gcgagtgaagagcaggactgcactcagggttatccaccagaaccaggggaccctaagagc
gacaacgaaagcgacgtggatgtctgtttcacagacgatcagagcgaccaggaaaccggg
gcgcagtag
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