Monodelphis domestica (gray short-tailed opossum): 100027458
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Entry
100027458 CDS
T01031
Name
(RefSeq) protocadherin gamma-B1-like
KO
K16496
protocadherin gamma subfamily B
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mdo04515
]
100027458
Cell adhesion molecules [BR:
mdo04515
]
Cadherins
Protocadherins
100027458
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
100027458
NCBI-ProteinID:
XP_007474477
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Position
1:333167011..333171704
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AA seq
844 aa
AA seq
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MERSAKQKGWAQRPQVLLPFLASLFNLALSEQIRYSIPEEMEKGSVVGNLAKDLGLDIRD
LSTRKLRISTENEYFAVSSESGELLVRGRIDREEICGSKSKCALEFETVAENPMNIFFII
VTIQDINDNPPQFLTNYISLEISELTLPGAKFALSSARDADVGMNSLKTYQISPEPHFSL
SVKERLDGSKYPQLLLEKSLDREIQSSHNLVLMAIDGGEPAQSGLAEIRINVTDANDNAP
IFSQDVYRVSLPENLLPGSSVLRVTATDKDEGINAEITFSFRSEDNSRQLFYLHPKSGEI
ITEDILDFEETNRYMMDVEAKDGSHTAHCNIQIEILDENDNAPEVNFVSLSDQIPEDSMP
GTVIALIKTHDRDSKENGQVSCHIQENIPFKLESSSRNYHKLLTDGPLDREQTPKYNITV
IAVDKGNPPLFTSKIFILHIADINDNPPVFLQPSYVAYFSENNPSGSSIAKVLAEDPDLE
QNGRVSYSILSSDLAPLPLSSYVSVNGHSGDIFAQRSFDYEQVRTFELMLQAEDSGSPAL
KTNVSLRVFILDCNDNAPNILYPALASDSSALFDMVPRLAEPGYLVTKVVAVDADSGHNA
WLAYRVLQATDMGLFNVGLRTGEVRTTRALSDKEATRHRLLVSVQDGGQPPLSATVALHL
VFADNLQEVLPEMREEHSDILNPKSELQFYLVIALSLISVLFLITVTLTVTLHLRRFCKP
NMLSCVHVDVCSMAKPVVPPNYNEGTLPYSYNLCVASEAGKMEYNFLKFAEGMTFPQNLH
FNEDSWVLNNSDGELKVTSDLVTSQERREIQQLPSAFQPIEPRIDQEHKEKAADTSPSAQ
RNRR
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaagtgccaagcagaagggctgggcacagaggcctcaggtactgcttcctttc
ttggcgtctttgttcaatctcgcactttctgagcagatccgctactccattccagaggaa
atggagaaaggatcggtggtggggaacctcgccaaagatctggggctcgatatccgggat
ttgtctactcggaaactgcggatcagtacagagaatgaatactttgctgtgagctccgag
agtggagaattactggtaagaggcagaatagatcgagaggaaatatgcgggagcaagtcc
aaatgtgctctggagttcgaaacagtagctgaaaatccaatgaatatcttctttataatt
gtgacgattcaggatattaatgacaatccgccgcaattccttacaaactatatttcccta
gaaataagcgaactgacacttccaggagcaaaatttgctctttcttcagcacgagatgca
gacgtgggcatgaactctcttaaaacatatcagatcagtcccgagccccatttctctctg
tcagtgaaggaaagactagatggcagtaaatacccgcaattgcttttggaaaaatccctg
gaccgagaaattcagagttctcacaatttggtccttatggccatcgatggcggagaaccg
gcccaaagcggcttggccgaaatcaggatcaatgtcaccgatgccaatgataatgcccca
atttttagccaagacgtctacagggtcagtcttccagagaacttgctcccgggctcctca
gtactgcgtgtgaccgccactgacaaagatgaggggatcaacgcagagattaccttctct
ttccgcagtgaggataatagtagacaattgttctacctccaccccaagagtggagaaatt
ataactgaagatatattggactttgaagaaacaaatagatatatgatggatgtcgaagca
aaggacggtagtcacacagcacattgtaacattcaaattgaaattctcgatgaaaatgat
aatgccccagaggtgaactttgtctcactctctgatcaaattccggaagactccatgcca
ggaactgttatcgcactcattaaaacacatgaccgagattcgaaggaaaatggtcaggtc
tcttgtcatatccaagaaaatattcctttcaagttagagtcctcgtctaggaattaccac
aaactgctgacagatgggcctcttgaccgtgagcagactccgaagtataatatcactgtg
atagctgtagacaagggaaacccacctctgttcaccagcaaaatattcatcttgcacatt
gcagacattaatgacaatcctcccgttttcctccagccttcctatgtcgcttacttttct
gaaaataatccttctggttcttccatcgccaaggtcctggcagaggaccctgaccttgaa
cagaatggccgggtgtcctactccatactgagcagtgacttggccccactccctctgtcc
tcctacgtgtctgtcaatggacatagtggggacatcttcgcacagcgttccttcgactat
gagcaggtcaggactttcgaactgatgttgcaggcggaagactctgggtctcctgctcta
aaaactaacgttagcctgcgagtgtttatcctcgactgcaatgacaatgccccaaacatc
ctataccctgccctggcgtcggacagctctgcccttttcgatatggtccctagactggcg
gagcctggctacctggtcaccaaggtggtggctgtggatgcagactccggacacaatgcc
tggctggcctatcgggtgctgcaggccacggatatgggactctttaacgtgggactgcgc
acaggcgaggtcaggaccaccagagctttgtctgataaagaggcaactcggcaccgcctg
ctggtctctgtgcaggatggtgggcagcccccactctcggccacggtggctttgcacttg
gtctttgcagacaacctgcaggaggtgctacccgagatgagggaggagcactcagatatc
ctgaaccccaagtctgagctacagttttacctagtaatagctttgtccctaatttctgtg
ctcttcctcatcacagtaacacttactgtcactctgcatcttcggagattttgcaagccc
aacatgttgagctgtgtccatgtagatgtttgctctatggccaaacctgttgtcccccca
aactacaatgaggggactttgccatattcttataatctgtgtgtggcctcagaagcagga
aagatggaatataattttctcaaatttgctgaaggaatgacatttccccagaatctccac
tttaatgaggattcttgggtcctaaacaacagtgatggagaactcaaggtcacatctgat
ttggtcacttctcaggaaaggagagaaatacagcagcttccttccgccttccaacccata
gagccaaggattgatcaggagcacaaagaaaaagctgcagacacaagtccatctgcgcaa
cggaatcgccgataa
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