Monodelphis domestica (gray short-tailed opossum): 100027473
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Entry
100027473 CDS
T01031
Symbol
ROBO1
Name
(RefSeq) roundabout guidance receptor 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04360
Axon guidance
mdo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100027473 (ROBO1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100027473 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mdo04515
]
100027473 (ROBO1)
Cell adhesion molecules [BR:
mdo04515
]
Immunoglobulin superfamily
ROBO family
100027473 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
Pur_ac_phosph_N
Unc5_NetrinR_N
Big_4
Ig_J_second
DUF7908
Motif
Other DBs
NCBI-GeneID:
100027473
NCBI-ProteinID:
XP_007500795
Ensembl:
ENSMODG00000016857
LinkDB
All DBs
Position
7:complement(1824852..2902763)
Genome browser
AA seq
1658 aa
AA seq
DB search
MAVLSLLLLLWMAEITSPVGVPGRTKAGSRWKGEKNHSADVERGPDAGTPLPASDPEDNS
LGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKD
DSRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYICVARNYLGEAVSHNASLEVAILRDDFR
QNPSDVMVAVGEPAVMECQPPRGHPEPTISWRKDGSPLDDRDERITIRGGKLMITYTRKS
DAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVEDSAEFKCEARGDPVPTV
RWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVVSEP
PHFVVKPRDQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYHPPQSSSRFSVSQT
GDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIQQGPGNQTVAVDG
TLVLSCVATGSPVPTILWRKDGVLVPTQDSRIKQLDTGALQIRYAKLGDTGRYTCIASTP
SGEATWSAYIEVQEFGIPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGAT
PTSYIIEAFSHASGSSWQTVAENVKTETFATKGLKPNAIYLFLVRAANAYGLSDPSQISD
PVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTVLSSSSIEVHWTVDQQSQYIQGYKIL
YRPSSAPHGDSEWLVFEVRTPTQNSAILPELRKGASYEIKARPFFNEFQGADSDVKLAKT
LEEAPSAPPQSVTISKNDGNGTAILVTWQPPPEDTQNGMVQEYKVWCLGNESRYHINKTV
DGSTFSVIIPSLVPGVRYSVEVAASTGAGSGVKSEPQFIQLDSHGNPVSPEDQVSLAQQI
SDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQ
RGGEAVSSGGRPGLLNINEPAAQPWLADTWPNTGSSHNDCSINCCTASNGNSDGNLTTYS
RPADCIANYNNQLDNKQSNLMLPEPTVYGDVDLSNKINEMKTFNSPNLKDGRLVTAPGQP
TPYATTQLIQSGISNNINNGHGEASEKPWKASSQPKQEAASIQYNIMEQNKLNKDYRTTD
TIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKLPKQTGMNWADLLPPPP
AHPPPHSHSEDYSLSVDESYDQEIPCPVPPARMYLQQEELEEEDERGPTPPVRGAASSPA
AVSYSHQSTATLTPSPQEELQPMLQDCPEDIGHGQHHPDRRRQPVSPPPPPRPISPPHTY
GYISGPLVSDMDTDVPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMI
NGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDATGRRH
FHGSHCPRPTSPVSTDSNVSAALMQRARPAKKQKHAPGHPRREVYTDDLPPPPVPPPALK
SPTVQSKGHLEGRPMMLPKLPHVEARADRSAERKGGGYKGREALDGRPASDTRTNPGEPR
DAQELQGDGKARGNKASRRDLPPPKTHLVQEDILPYCRPTFPTSNNPRDPSSSSSMSSRG
SGRQRDQANIGRRNVAEMQVLGAYEKEVDNEELEETES
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctgtcactgctgctgctgctctggatggcagaaatcacttctcctgtgggc
gtcccaggcaggaccaaagctggctcaaggtggaaaggtgaaaagaatcactctgccgac
gtggagagggggccggacgccgggacgccactccccgcctcggatcccgaggacaattcg
ctgggctacacaggctcccgtcttcgtcaggaggattttcctcctcgcattgttgaacat
ccttctgatctcattgtttcaaaaggcgaaccagctactttgaactgtaaagcagaaggc
agacccaccccaactattgagtggtataaaggaggagaaagagtggaaacagacaaagat
gactcccgttcccataggatgctacttccgagcggatctttatttttcttacgtatagta
catggacgcaaaagtaggcctgatgaaggcgtctatatctgtgtcgcacggaattatctt
ggagaagctgtgagccacaacgcatcgctggaggtagcaatactgcgagatgacttccgg
cagaacccttccgatgtgatggtggctgtgggggagccagccgtgatggagtgccagcct
ccacgaggccatccagagcccacgatttcctggagaaaggacggatcgccactggacgac
cgagacgagcgaattaccatccgaggagggaagctcatgattacatacacgcgtaagagt
gatgctggaaaatatgtttgtgttggcaccaacatggtgggagaaagagaaagcgaagtc
gcggagctcacagttttagagaggccgtcgttcgtgaagaggccgagtaacctggcggtg
actgtggaggacagcgcagaattcaagtgcgaggcccgaggggaccccgtccccaccgtg
cggtggaggaaagatgacggagagctccccaaatccagatatgaaatccgagatgatcat
accttgaaaatccgaaaggtaatggcaggtgatatgggatcatacacatgtgttgcagaa
aatatggttgggaaagctgaagcatcagcaactctgacagtacaagttgtgtctgagcct
ccccacttcgtggtgaagcctcgggaccaggtcgccgcgttgggacggaccgtgacgttc
cagtgcgaggccaccggaaaccctcagcccgccatcttctggaggagagaggggagccag
aacctgctgttttcctaccaccctccgcaatcctcgagccgattttcggtctcccagacg
ggcgacctgacgataaccaacgtgcagcgctcggacgtgggctactacatctgccagact
ctgaacgtcgccggaagcatcatcaccaaagcctacctggaagtgactgacgtgatcgca
gaccggcctccccccgtcatccagcagggtcccgggaatcagactgtggcggtggacggc
accctcgtgctcagctgcgtggccacgggcagccccgtgcccaccatcctgtggaggaag
gacggagtcctcgtgcccacccaggactcacgcatcaaacagctggacacaggagcgctg
cagatccgctacgccaagctgggtgacactggtcggtacacctgcattgcttcgactccc
agtggtgaagcgacatggagtgcgtatatcgaagttcaagaatttgggattccagttcag
cctccgagacccactgatccaaatttaatcccaagtgccccttctaaacccgaagtcaca
gatgtcagccgaaacaccgtcacgttgtcatggcagcccaatctgaactcaggtgcaacc
ccaacgtcttacataatagaagccttcagccatgcatctggcagcagctggcagacggta
gcagaaaacgtgaagacagaaacatttgccactaaaggactaaagcctaacgcaatctac
ctttttcttgtgagagctgctaatgcctatggcctgagtgatccgagtcagatatcagat
ccagtaaagactcaagatgttccaccgacaagccaaggtgtggatcacaagcaggtccag
agagaattggggaatgtggttctgcaccttcataaccctaccgtgctctcttcttcttcc
atcgaagtgcactggacggtggaccaacaatcccagtatattcaaggctacaaaatcctg
tacaggccctcgagcgctccccacggagactcggagtggctggtgtttgaagtgaggacc
cccacccagaacagcgccatcctccccgagctcagaaagggagccagctacgaaatcaag
gctcggcctttctttaatgagttccaaggagcagacagtgatgtcaagttggcgaaaacc
ctggaggaagcaccaagcgctccaccccagagtgtaacaatatcgaagaacgatggaaat
ggaactgcaattctagtgacttggcagcccccccccgaagacacccagaatggaatggtc
caagagtataaggtttggtgcctgggcaatgaaagtcgataccacataaacaagacagtg
gatgggtctaccttttctgtcatcattccttctctagttcctggggttcggtacagcgtg
gaagtagcagccagcacaggggcaggatctggcgtcaaaagtgaaccacagttcattcag
ttagactcccatgggaatcctgtgtcaccagaggatcaagtcagtcttgctcagcagatt
tctgatgttgtgaagcagccagcttttatagcaggcattggagctgcctgttggataatc
cttatggtcttcagcatctggttgtatcgtcaccggaagaagagaaatggactcactagt
acttatgctggtataagaaaagtcccgtcttttaccttcacaccaacagtaacttatcag
agaggaggcgaagccgtgagcagcggaggcaggcccggccttctcaacatcaacgagccc
gccgcgcagccctggctggcagacacgtggcccaacacgggcagcagccacaacgactgc
tccatcaactgctgtacggcaagcaacggcaacagcgacggcaacctgaccacctacagc
cgcccggctgattgtatagcaaattacaacaaccagctggataacaaacagtccaatctg
atgctgcctgagcctaccgtgtatggggacgtggacctgagcaacaagatcaatgaaatg
aaaaccttcaatagtcccaacctgaaggatggccgattggttactgcgccagggcagccc
actccttacgccaccactcagctcatccagtccggcatcagcaacaacattaataatggc
cacggagaggccagtgagaaaccctggaaggcctctagtcagcccaagcaggaagcggca
tccattcagtataacattatggagcaaaacaaactaaacaaagattaccgaacgactgat
accatcccaccaactatcccgtataaccaatcgtatgaccagaatactgggggctcctac
aacagttcagatcgaggcagtagtacatctgggagtcaagggcacaagaagggcgcccga
acccccaagttacccaaacagacgggcatgaactgggcagacctgcttccacctcccccg
gcacatcctcctccccacagccatagtgaagactacagcctttctgtagatgagagctat
gaccaggaaatcccgtgcccggtgccaccagctaggatgtacttacaacaagaggagctc
gaagaagaagatgaacgaggtccgacccccccggtgcgtggagcagcttcctctccggca
gccgtgtcctacagtcatcagtctactgccaccctgacgccttcccctcaagaggagctt
cagcccatgttacaagactgcccagaggacattggccatgggcaacaccatcccgacagg
agacgccagcctgtgagccctccccctccgccaaggcccatttctcccccccacacgtac
ggttacatttcaggacctctcgtgtccgatatggacactgacgtgcccgaagaggaagaa
gacgaggccgacatggaagtagccaaaatgcaaaccaggaggctgctcttacggggcctt
gagcagacccctgcttccagcgtgggcgatctggaaagctctgtcacgggctccatgatc
aacggctggggctccgcctcagaggaagacaacatttccagtggacgttccagtgtgagc
tcttctgatggctcattttttacggatgcggattttgcacaggctgttgccgcagcagct
gaatatgctggtcttaaggtggcaagacgtcagatgcaggacgccacaggccgcagacac
ttccatggctcccactgccccaggcccaccagccccgtgtctacggacagtaacgtgagc
gccgctctgatgcagagggcccggccagccaagaaacagaagcacgccccgggacatccg
cgcagagaagtctacacggatgatcttcctcctccgccagtgccgcctcctgctctaaaa
tctcccacagtccagtccaagggacacctcgagggtcggccgatgatgttgccaaaactt
ccccacgtagaggcgcgcgcagaccggtctgcagagagaaaagggggtggctacaagggg
agagaagcgctggatggaaggccagcttccgacacgaggacaaatccgggagagcccaga
gacgcccaagaactgcaaggtgatgggaaggccagagggaacaaggcgtccagacgagac
cttccaccgccaaaaacccaccttgtgcaagaagatatccttccgtactgtagacctaca
tttccaacatcaaataatcccagagatccaagttcttcaagctcaatgtcatcaagaggt
tcaggaagacaaagagatcaagccaatataggtcgaaggaatgttgcagaaatgcaagtg
ctcggagcatatgaaaaagaagtggataatgaagaattagaggaaactgaaagctaa
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integrated database retrieval system
