Monodelphis domestica (gray short-tailed opossum): 100027473
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Entry
100027473 CDS
T01031
Symbol
ROBO1
Name
(RefSeq) roundabout guidance receptor 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100027473 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mdo04515
]
100027473 (ROBO1)
Cell adhesion molecules [BR:
mdo04515
]
Immunoglobulin superfamily
ROBO family
100027473 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Big_4
Motif
Other DBs
NCBI-GeneID:
100027473
NCBI-ProteinID:
XP_007500795
Ensembl:
ENSMODG00000016857
LinkDB
All DBs
Position
7:complement(1824852..2902763)
Genome browser
AA seq
1658 aa
AA seq
DB search
MAVLSLLLLLWMAEITSPVGVPGRTKAGSRWKGEKNHSADVERGPDAGTPLPASDPEDNS
LGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKD
DSRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYICVARNYLGEAVSHNASLEVAILRDDFR
QNPSDVMVAVGEPAVMECQPPRGHPEPTISWRKDGSPLDDRDERITIRGGKLMITYTRKS
DAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVEDSAEFKCEARGDPVPTV
RWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVVSEP
PHFVVKPRDQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYHPPQSSSRFSVSQT
GDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIQQGPGNQTVAVDG
TLVLSCVATGSPVPTILWRKDGVLVPTQDSRIKQLDTGALQIRYAKLGDTGRYTCIASTP
SGEATWSAYIEVQEFGIPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGAT
PTSYIIEAFSHASGSSWQTVAENVKTETFATKGLKPNAIYLFLVRAANAYGLSDPSQISD
PVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTVLSSSSIEVHWTVDQQSQYIQGYKIL
YRPSSAPHGDSEWLVFEVRTPTQNSAILPELRKGASYEIKARPFFNEFQGADSDVKLAKT
LEEAPSAPPQSVTISKNDGNGTAILVTWQPPPEDTQNGMVQEYKVWCLGNESRYHINKTV
DGSTFSVIIPSLVPGVRYSVEVAASTGAGSGVKSEPQFIQLDSHGNPVSPEDQVSLAQQI
SDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQ
RGGEAVSSGGRPGLLNINEPAAQPWLADTWPNTGSSHNDCSINCCTASNGNSDGNLTTYS
RPADCIANYNNQLDNKQSNLMLPEPTVYGDVDLSNKINEMKTFNSPNLKDGRLVTAPGQP
TPYATTQLIQSGISNNINNGHGEASEKPWKASSQPKQEAASIQYNIMEQNKLNKDYRTTD
TIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKLPKQTGMNWADLLPPPP
AHPPPHSHSEDYSLSVDESYDQEIPCPVPPARMYLQQEELEEEDERGPTPPVRGAASSPA
AVSYSHQSTATLTPSPQEELQPMLQDCPEDIGHGQHHPDRRRQPVSPPPPPRPISPPHTY
GYISGPLVSDMDTDVPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMI
NGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDATGRRH
FHGSHCPRPTSPVSTDSNVSAALMQRARPAKKQKHAPGHPRREVYTDDLPPPPVPPPALK
SPTVQSKGHLEGRPMMLPKLPHVEARADRSAERKGGGYKGREALDGRPASDTRTNPGEPR
DAQELQGDGKARGNKASRRDLPPPKTHLVQEDILPYCRPTFPTSNNPRDPSSSSSMSSRG
SGRQRDQANIGRRNVAEMQVLGAYEKEVDNEELEETES
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctgtcactgctgctgctgctctggatggcagaaatcacttctcctgtgggc
gtcccaggcaggaccaaagctggctcaaggtggaaaggtgaaaagaatcactctgccgac
gtggagagggggccggacgccgggacgccactccccgcctcggatcccgaggacaattcg
ctgggctacacaggctcccgtcttcgtcaggaggattttcctcctcgcattgttgaacat
ccttctgatctcattgtttcaaaaggcgaaccagctactttgaactgtaaagcagaaggc
agacccaccccaactattgagtggtataaaggaggagaaagagtggaaacagacaaagat
gactcccgttcccataggatgctacttccgagcggatctttatttttcttacgtatagta
catggacgcaaaagtaggcctgatgaaggcgtctatatctgtgtcgcacggaattatctt
ggagaagctgtgagccacaacgcatcgctggaggtagcaatactgcgagatgacttccgg
cagaacccttccgatgtgatggtggctgtgggggagccagccgtgatggagtgccagcct
ccacgaggccatccagagcccacgatttcctggagaaaggacggatcgccactggacgac
cgagacgagcgaattaccatccgaggagggaagctcatgattacatacacgcgtaagagt
gatgctggaaaatatgtttgtgttggcaccaacatggtgggagaaagagaaagcgaagtc
gcggagctcacagttttagagaggccgtcgttcgtgaagaggccgagtaacctggcggtg
actgtggaggacagcgcagaattcaagtgcgaggcccgaggggaccccgtccccaccgtg
cggtggaggaaagatgacggagagctccccaaatccagatatgaaatccgagatgatcat
accttgaaaatccgaaaggtaatggcaggtgatatgggatcatacacatgtgttgcagaa
aatatggttgggaaagctgaagcatcagcaactctgacagtacaagttgtgtctgagcct
ccccacttcgtggtgaagcctcgggaccaggtcgccgcgttgggacggaccgtgacgttc
cagtgcgaggccaccggaaaccctcagcccgccatcttctggaggagagaggggagccag
aacctgctgttttcctaccaccctccgcaatcctcgagccgattttcggtctcccagacg
ggcgacctgacgataaccaacgtgcagcgctcggacgtgggctactacatctgccagact
ctgaacgtcgccggaagcatcatcaccaaagcctacctggaagtgactgacgtgatcgca
gaccggcctccccccgtcatccagcagggtcccgggaatcagactgtggcggtggacggc
accctcgtgctcagctgcgtggccacgggcagccccgtgcccaccatcctgtggaggaag
gacggagtcctcgtgcccacccaggactcacgcatcaaacagctggacacaggagcgctg
cagatccgctacgccaagctgggtgacactggtcggtacacctgcattgcttcgactccc
agtggtgaagcgacatggagtgcgtatatcgaagttcaagaatttgggattccagttcag
cctccgagacccactgatccaaatttaatcccaagtgccccttctaaacccgaagtcaca
gatgtcagccgaaacaccgtcacgttgtcatggcagcccaatctgaactcaggtgcaacc
ccaacgtcttacataatagaagccttcagccatgcatctggcagcagctggcagacggta
gcagaaaacgtgaagacagaaacatttgccactaaaggactaaagcctaacgcaatctac
ctttttcttgtgagagctgctaatgcctatggcctgagtgatccgagtcagatatcagat
ccagtaaagactcaagatgttccaccgacaagccaaggtgtggatcacaagcaggtccag
agagaattggggaatgtggttctgcaccttcataaccctaccgtgctctcttcttcttcc
atcgaagtgcactggacggtggaccaacaatcccagtatattcaaggctacaaaatcctg
tacaggccctcgagcgctccccacggagactcggagtggctggtgtttgaagtgaggacc
cccacccagaacagcgccatcctccccgagctcagaaagggagccagctacgaaatcaag
gctcggcctttctttaatgagttccaaggagcagacagtgatgtcaagttggcgaaaacc
ctggaggaagcaccaagcgctccaccccagagtgtaacaatatcgaagaacgatggaaat
ggaactgcaattctagtgacttggcagcccccccccgaagacacccagaatggaatggtc
caagagtataaggtttggtgcctgggcaatgaaagtcgataccacataaacaagacagtg
gatgggtctaccttttctgtcatcattccttctctagttcctggggttcggtacagcgtg
gaagtagcagccagcacaggggcaggatctggcgtcaaaagtgaaccacagttcattcag
ttagactcccatgggaatcctgtgtcaccagaggatcaagtcagtcttgctcagcagatt
tctgatgttgtgaagcagccagcttttatagcaggcattggagctgcctgttggataatc
cttatggtcttcagcatctggttgtatcgtcaccggaagaagagaaatggactcactagt
acttatgctggtataagaaaagtcccgtcttttaccttcacaccaacagtaacttatcag
agaggaggcgaagccgtgagcagcggaggcaggcccggccttctcaacatcaacgagccc
gccgcgcagccctggctggcagacacgtggcccaacacgggcagcagccacaacgactgc
tccatcaactgctgtacggcaagcaacggcaacagcgacggcaacctgaccacctacagc
cgcccggctgattgtatagcaaattacaacaaccagctggataacaaacagtccaatctg
atgctgcctgagcctaccgtgtatggggacgtggacctgagcaacaagatcaatgaaatg
aaaaccttcaatagtcccaacctgaaggatggccgattggttactgcgccagggcagccc
actccttacgccaccactcagctcatccagtccggcatcagcaacaacattaataatggc
cacggagaggccagtgagaaaccctggaaggcctctagtcagcccaagcaggaagcggca
tccattcagtataacattatggagcaaaacaaactaaacaaagattaccgaacgactgat
accatcccaccaactatcccgtataaccaatcgtatgaccagaatactgggggctcctac
aacagttcagatcgaggcagtagtacatctgggagtcaagggcacaagaagggcgcccga
acccccaagttacccaaacagacgggcatgaactgggcagacctgcttccacctcccccg
gcacatcctcctccccacagccatagtgaagactacagcctttctgtagatgagagctat
gaccaggaaatcccgtgcccggtgccaccagctaggatgtacttacaacaagaggagctc
gaagaagaagatgaacgaggtccgacccccccggtgcgtggagcagcttcctctccggca
gccgtgtcctacagtcatcagtctactgccaccctgacgccttcccctcaagaggagctt
cagcccatgttacaagactgcccagaggacattggccatgggcaacaccatcccgacagg
agacgccagcctgtgagccctccccctccgccaaggcccatttctcccccccacacgtac
ggttacatttcaggacctctcgtgtccgatatggacactgacgtgcccgaagaggaagaa
gacgaggccgacatggaagtagccaaaatgcaaaccaggaggctgctcttacggggcctt
gagcagacccctgcttccagcgtgggcgatctggaaagctctgtcacgggctccatgatc
aacggctggggctccgcctcagaggaagacaacatttccagtggacgttccagtgtgagc
tcttctgatggctcattttttacggatgcggattttgcacaggctgttgccgcagcagct
gaatatgctggtcttaaggtggcaagacgtcagatgcaggacgccacaggccgcagacac
ttccatggctcccactgccccaggcccaccagccccgtgtctacggacagtaacgtgagc
gccgctctgatgcagagggcccggccagccaagaaacagaagcacgccccgggacatccg
cgcagagaagtctacacggatgatcttcctcctccgccagtgccgcctcctgctctaaaa
tctcccacagtccagtccaagggacacctcgagggtcggccgatgatgttgccaaaactt
ccccacgtagaggcgcgcgcagaccggtctgcagagagaaaagggggtggctacaagggg
agagaagcgctggatggaaggccagcttccgacacgaggacaaatccgggagagcccaga
gacgcccaagaactgcaaggtgatgggaaggccagagggaacaaggcgtccagacgagac
cttccaccgccaaaaacccaccttgtgcaagaagatatccttccgtactgtagacctaca
tttccaacatcaaataatcccagagatccaagttcttcaagctcaatgtcatcaagaggt
tcaggaagacaaagagatcaagccaatataggtcgaaggaatgttgcagaaatgcaagtg
ctcggagcatatgaaaaagaagtggataatgaagaattagaggaaactgaaagctaa
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integrated database retrieval system
