Monodelphis domestica (gray short-tailed opossum): 100027569
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Entry
100027569 CDS
T01031
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon, catalytic subunit
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03030
DNA replication
mdo03410
Base excision repair
mdo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100027569 (POLE)
03410 Base excision repair
100027569 (POLE)
03420 Nucleotide excision repair
100027569 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdo03032
]
100027569 (POLE)
03400 DNA repair and recombination proteins [BR:
mdo03400
]
100027569 (POLE)
Enzymes [BR:
mdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100027569 (POLE)
DNA replication proteins [BR:
mdo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
100027569 (POLE)
DNA repair and recombination proteins [BR:
mdo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
100027569 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
100027569
NCBI-ProteinID:
XP_007489637
Ensembl:
ENSMODG00000015171
LinkDB
All DBs
Position
3:complement(463914894..463991975)
Genome browser
AA seq
2242 aa
AA seq
DB search
MDARFGFERLREPDEKTGWLINMHPTEILDEDKRLVSAVDYYFIQDDGNRFKVALPYKPY
FYIATRKGCEREVSSFLSKKFQGKIAKLETVPKEDLDLSNHLVGLKRNYIKLSFNTVDDL
VKVRKEISPAVKKNRERDNTSDTYTAMLSSALMGVSVTTDEGVSKKIADQLDNVVDMREY
DVPYHIRLSIDLKIHVAHWYNVRYRGSTLPIEITRRDDLVERPDPVVLAFDIETTKLPLK
FPDAETDQIMMISYMVDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLI
QRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLSMHQEIGFQKDSQGEYKSSQCIH
MDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEEPQTLATYSVSDAV
ATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQEF
NKLTEDGHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTMRHAIEE
EENVPIEQVTNFQEVCDEIKNKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSA
IVNEATCAACDFNKPGANCQRKMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPDKPA
RAFHELSREEQAKYEKKRLADYCRKAYKKIHITKVEERLTTICQRENSFYVDTVRAFRDR
RYEFKGLHKVWKKKLSAAMEMGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGA
RWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNAK
KPKVTISYPGAMLNIMVKEGFTNDQYQELTEPTSLTYITRSENSIFFEVDGPYLAMILPA
SKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGNTLEEVYA
SVAKVADYWLDVLYSRAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFL
GDQMVKDAGLSCRFIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDI
RTILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVRHPDWLHKKLMEKHDIYKQKKIS
ELFIHEGKRQVTVNQHPEGSQGHGILDMEDLIQTKPLQSAIPIATKRKRIPVESQEESQN
LELIQSWREILGQPPSLGTTREEWLVWITFHKKKWELQARQRQERRKRRRVETREGVLSS
GIIRDGPATGLGHFLRKTARSILDLPWQIVQISETNQPGLFRLWAVIGNDLHCIKLNIPR
VFYVNQRVPKEEEGPSFRKVNRVLPRSNMVYNLYEYSVPEDMYQEHINEINADLSAPDIE
GVYETQVPLLLRALIQLGCVCMVSRQLVQHLTGREAETFPLEYLEMRSLAQFSYLEPGSI
RHIYLYHHSQGNKALFGLFIPSQRKSSVFVLDTVRSNQMPNLNSMYSAEHHLLLEKVGPE
LLPPDKHIFEVRAETDLKTIYRAIQRLLLGYKEERRGPTLIAVQSNWELKRLATGMPVFE
EFPLVPVCVTDDISYGALDWQRHAARRMIRHYLNLDTCLSQAFEMSRYFHIPVGNLPEDI
STFGSDLFFSRHLRHHNHLLWFSPTSRPDLGGKEADDNRLVMEFDDQASVEINSPGCYST
VCLELDIQNLAVNTILQSHHVNDMEGASSMGISFDVIQQASLEEMVTGNQAANIPASYDE
TALCSNTFRILKSMVVGWVKEITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLSM
MKKLFLQLVAEFKRLGSSVIYANFNRIILCTKKRHIEDAIAYIDYITNSIHSKEIFHSLT
ISFSRCWEFLLWMDPANYGGIKGKVPTRVHYGMQNTQKEQKAEEEQESEEEQEEEEEEEK
EIIEESNVEDLLDNNWNIVQFLPQAASCQSYFLMIISAYIVAVYHSMKEELRRNAPGCTP
IKRRGNSQLSQEAEGMAGALPGMITFSQDYVANELTQNFFTITQKIQKKVMGSRNSTEPS
EMFPLLPGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQF
RDPCRSYVLPEVICRNCNFCRDLDLCKDPFLSQDASILPQWLCSNCQAAYDSAHIEMALV
EALQKKLMAFTLQDLICLKCKGVKEANMPVYCSCAGDFSLTIQTKVFVEQIGIFRNIARH
YSMTYLTEMIDWLLQMNPQLTS
NT seq
6729 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaagatttggttttgaaagactccgtgaacctgatgagaagactggctggcta
atcaacatgcacccaactgagattttagatgaagataagcgtctggtcagtgcagtggat
tactattttatccaagatgatgggaaccgatttaaggtggcgctgccttacaagccatat
ttctacatagcaacaaggaagggttgcgagagagaagtgtcatcttttctttctaagaag
tttcaagggaaaattgccaaactggagactgttcccaaagaggatctggatttgtcaaat
cacttggtgggcttgaagcgaaattacattaaactctctttcaatactgtggatgacctt
gtaaaagtgaggaaggagatttccccagccgtgaagaagaatcgagagagggataacacc
agtgatacctatacagctatgttgtctagtgcattgatgggagttagtgtaactactgat
gaaggagtctctaagaagatagctgaccagttggacaatgtagttgacatgcgagagtat
gatgttccctaccacattcgtttgtccattgacctgaagatccatgtggctcactggtat
aatgttcggtaccggggcagtacccttcccattgaaatcacccgccgagatgaccttgtt
gaacgacctgaccctgtagttttggcatttgacattgaaacaaccaaactgcctcttaag
ttcccagatgcagagactgaccagattatgatgatctcttacatggtagatggtcaggga
tacttgatcactaacagggagattgtttctgaggacattgaagattttgagttcacccct
aagccagaatatgagggacccttttgtgtcttcaatgagcctgatgaggctcatctaatc
cagagatggtttgagcatgttcaggaaaccaaacctaccatcatggtgacttacaatggt
gacttttttgactggccatttgtggaagccagagcagcagttcatgggctgagtatgcat
caggagattggattccaaaaggacagtcaaggggaatacaagtcttctcagtgtatccat
atggattgtctcagatgggtgaagagggacagttatcttccagtgggcagccataacctt
aaagctgcagccaaagccaagctaggatatgatcctgtggagttggaccccgaggacatg
tgtcgaatggccactgaggaacctcagacgctagctacatattcagtatcagatgctgtt
gctacttactacatgtatatgaagtatgtccatcccttcatctttgctctatgtaccatc
atccccatggagccagatgaggtcctgcggaaaggttcaggaactttgtgtgaggctttg
ctgatggtccaggctttccatgccaacatagtttttcctaacaagcaagaacaggagttt
aacaaactgacagaagatggccatgtactggactcagagacatatgttggtggccatgtg
gaggctctagaatcgggtgtctttcgcagtgacattccttgccgatttaaaatgaatcct
gcagcctttgactttttgcttcagcgtgtggagaagaccatgcgtcatgctattgaagaa
gaagagaatgtgcccattgagcaagttaccaacttccaagaggtgtgtgatgaaattaag
aacaaactgacctctctgaaggatgtgcccaatcgaattgaatgccctctcatataccat
ctggatgtgggtgccatgtaccccaacattatccttactaacaggttgcagccttctgcc
atagtgaatgaggccacatgtgctgcctgtgactttaacaaaccaggtgctaactgtcag
cgaaagatgacctggcagtggaggggggagttcatgccagccagccgtagtgagtatcat
cgcattcaacagcagctggaatcggagaagtttcccccattgttcccagataaaccagcc
cgagcatttcatgagctgtcccgagaagaacaggctaaatatgagaagaaaagactggca
gattactgccgaaaagcttacaagaagatccacatcaccaaggtggaagaacgtctcacc
accatctgccagcgggagaactccttctatgtagacacagttcgagctttccgagaccga
cgatatgaattcaaaggactacataaggtatggaagaagaagttgtctgctgccatggag
atgggagatgctgctgaagtcaagaggtgtaaaaacatggagattttgtacgattccttg
cagctggctcacaaatgtatcctcaactctttctatggctatgtcatgcgcaaaggggct
cgatggtattccatggagatggcaggaattgtctgcttcacaggagccaatattatcaca
caagcccgggagctgattgagcagattgggagacctctagagcttgacacagatggaatt
tggtgtgtcctaccaaatagcttccccgaaaattttgttatcaagtcaaccaatgcaaaa
aagcccaaggtgaccatctcctatcctggagctatgttaaatatcatggtgaaggaaggc
ttcaccaatgatcaatatcaggagctcactgagcccacttccctcacttacatcacccgc
tcagagaacagcatcttctttgaagtggatgggccataccttgccatgattcttccagct
tccaaggaggaggggaagaaactgaagaaaagatatgctgtgttcaatgaagatggttcc
ctggctgagctaaaaggctttgaagtcaaaaggcgtggagaactacagttgattaagatc
ttccaatcatcggtgtttgaagccttccttaagggcaatactttggaagaggtgtatgca
tctgttgctaaagtagcagactattggctagatgtgctctatagcagagcagccaatatg
cccgactcagagctatttgaactaatctctgagaaccgttctatgtctcggaaactggaa
gactacggagagcaaaaatctacctccatcagtacagcaaagaggctggctgagttcttg
ggggatcagatggtgaaggacgctggcctgagctgtcgcttcatcatctcccgcaaacct
gaaggatctccagtcacagagagggccatcccacttgccattttccaagcagaacccaca
gtaagaaaacacttcctccggaaatggctcaagagctcttctctacaagactttgacatt
cggacaattctggactgggattactacattgaaagacttgggagtgccattcagaagatc
attaccatccctgcagccctacagcaggtcaagaacccagtgccacgagtccgacaccct
gattggctacacaagaagctgatggagaagcatgatatttataagcagaagaagatcagc
gagctatttatccatgagggcaagagacaggtcactgtaaatcagcatccagagggtagt
cagggacatgggattttggacatggaagacctcatccaaaccaaaccattgcagtcagca
attcctattgccaccaaaaggaagcgaatccctgtagagagccaagaagaatcccagaac
ttggagttgatccaatcctggcgagaaattttgggacagcctccatctcttggcacaacc
agggaagagtggcttgtgtggatcacattccataagaagaagtgggagctacaggcccgt
caacgccaagaacggaggaagcgacggcgtgtggagactagggaaggagtgctgagctca
gggatcatccgagatggcccagccacaggcttaggacactttttgcgaaaaacagcccga
agcatattggatctgccttggcagattgtgcagatcagtgagaccaaccaacctggcctc
ttcagactttgggctgtcattggtaatgatctgcactgtatcaagctgaatatcccacgt
gtgttttatgtgaaccagcgtgtacctaaggaggaagaaggaccttctttccgtaaggtg
aacagagtcctccctcgttccaacatggtctacaatctgtatgagtattccgtaccagag
gacatgtaccaagaacatatcaatgaaatcaatgctgatttgtctgcaccagacattgag
ggcgtttatgagacccaggtaccattgttgctacgggctcttatccaattaggttgtgtt
tgtatggtcagtaggcagctggtacagcacctcacaggccgggaggctgagacctttcct
ctagagtatttggaaatgcgttccttggcacaattcagctatcttgaaccaggaagcatc
cggcacatctatctatatcaccactctcagggcaacaaagcgctttttggactcttcatc
ccctcccagcgtaaatcctctgtgtttgtcttagacacggtgcgcagtaaccagatgcca
aatctgaattccatgtactcagcggagcaccaccttctgttggagaaggtgggaccagag
ctcctaccaccagacaagcacatttttgaagtgcgagctgagactgacctgaagactatt
tatagagctatccaaagactgttgcttggctacaaggaagaacgccgtggtcccacactc
attgctgtacagtccaactgggaactgaagaggctggccactgggatgcctgtatttgag
gagttccctttggtaccagtctgtgtgactgatgacattagctatggggccttggactgg
cagcgtcatgcagcccggcgtatgatccggcactatctcaacctggacacttgcctgtct
caggcttttgagatgagtagatattttcacattcctgttggaaatctcccagaagacatc
tccacctttggatcagatctcttcttctctcgtcacctccgacaccataatcacctgctc
tggttttctcctacatcccgccctgacttgggtgggaaagaggcagatgacaatcgcctt
gtcatggaatttgatgaccaggcttctgtggaaatcaacagtcctgggtgctactccaca
gtatgtttggaactggacatccagaacttggcagtaaataccatcttgcagtctcaccat
gttaatgatatggaaggagcctccagcatgggaatcagttttgatgtcatccagcaagcc
tctctggaggaaatggtcacaggaaaccaggcagccaacatccctgccagctatgatgag
accgccctctgctctaacacattcaggatcttaaagagcatggtggtgggctgggtgaaa
gaaatcactcagtaccacaatgtctatgctgacaatcaagtgatgcacttttatcgctgg
cttcggtccccatcttctctcctctatgaccctgctttgcaccggactctccttagcatg
atgaagaagcttttcctgcagcttgtagctgagttcaagcgtctgggctcctcggtcatt
tatgccaacttcaatcgcatcatcctttgtaccaaaaagcgccacatcgaggatgccatt
gcctacatagactatatcaccaacagcatccactcgaaagaaattttccattccttgacg
atttccttctctcggtgctgggaatttcttctttggatggatcctgctaactatggagga
atcaaaggaaaagttccaacccgtgtccactatgggatgcaaaacacccagaaagaacaa
aaagcagaggaagaacaggagagtgaggaagagcaggaggaggaggaggaagaagagaaa
gagataatagaagaatccaatgtggaagacttactggataacaactggaatattgtacaa
tttcttcctcaagcagcctcttgccagagctactttctcatgattatttcagcatatatt
gtggctgtataccacagcatgaaagaggagctgagacgaaatgcccctgggtgcaccccc
atcaagaggagagggaacagtcagctgtcccaggaggctgaaggcatggctggggctctc
cctggaatgatcaccttttcccaggattatgtggccaatgagcttacccaaaactttttc
accatcactcagaagatccagaagaaagtcatgggctcccgaaactccacagagccctct
gagatgttccccctccttcctggctcccatctgctgctcaacaaccctgccctggagttc
ataaaatatgtgtgcaaggtgctctctctggacactaacattactaaccaagtgaacaag
ctgaacagagatctcctgcgccttgtcgatgtgggtgagttctcagaggaggcccaattc
cgggacccctgccgctcctatgtacttcctgaagtcatctgccggaattgcaacttctgc
cgggacctggatctctgcaaagaccctttcctctctcaggatgcctccatcctgcctcag
tggctttgctccaactgccaggcagcttatgactctgctcacattgagatggctctggta
gaagcccttcagaagaagctaatggcttttaccctgcaggacctgatctgcctaaagtgt
aaaggggtgaaggaggccaacatgcccgtctactgcagctgtgcgggagatttttccctg
actattcagaccaaggtctttgtagaacagattggcatcttcaggaacattgcccgacat
tatagcatgacctacctgacagaaatgattgactggctgctacaaatgaatcctcagctt
accagctag
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integrated database retrieval system
