Monodelphis domestica (gray short-tailed opossum): 100027580
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Entry
100027580 CDS
T01031
Symbol
VPS18
Name
(RefSeq) VPS18, CORVET/HOPS core subunit
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04140
Autophagy - animal
mdo04148
Efferocytosis
mdo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100027580 (VPS18)
04148 Efferocytosis
100027580 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100027580 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100027580 (VPS18)
Membrane trafficking [BR:
mdo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100027580 (VPS18)
Hops complex
100027580 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-RING_Vps41
zf-RING_5
zf-C3HC4_2
zf-RING_2
zf-RING_16
zf-C3H2C3
zf-ANAPC11
KNOX2
zf-rbx1
zf-RING_11
zf_RING_Vps8
zf-RING_UBOX
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
100027580
NCBI-ProteinID:
XP_001370944
Ensembl:
ENSMODG00000000200
UniProt:
F6TFE4
LinkDB
All DBs
Position
1:197854359..197860770
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AA seq
972 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGFVNAPLEKEAPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDILLRIDLGKANEPNQVELGRKDEAKVHKMFLDHTGSHLLIALSSTE
VLYINRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLHVLMEEGGPAPVCSIEAERGPDGRFFVIATTRQRLFQFTGRMAEGAE
VQGFSGLFATYTDHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWDYPPGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLRHMVKDSSTGHLWAHTERAVFRYHVQRESRDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYVESARCYALTQSYFEEIALKFLEVRQEEALAEFLQRKLAGL
KPTERTQATLLTAWLTELYLSRLGALQGDVDALPLYRETREQFRNFLSSPRNKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLSKHHDPQLFYKFSP
ILIRHIPRQLVDAWIDLGSRLDARQLIPALVNYSQGGEAQQVSHAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQAASLLAYLEQAGTSPHRVHYDLKYALRLCAEHGHNRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVKTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLQAYNRHIDELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCSACDFPLLNRPFYVFLCSHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGATPPPAKGPPRTKDGEGGTPGAPSREQLKADLDELVAAECVYCGELMIRSIDRPFID
PQRYEEEHQSWL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgagtacgaagactcgctttcgcgctctgccgtcctgcagccg
ggctgccccagcgtcggcatccctcactcggggtttgtaaatgccccactggagaaggag
gcacccatctttaccaagcagcgaattgactttactccttctgagcgtatcaccagcctt
gtagtttcttgcaatcaactctgcatgagcttgggcaaagatatcctactccgcattgat
ctgggaaaggcaaatgaaccgaaccaggtagagttgggccgcaaagatgaagccaaagtt
cataagatgtttctggatcacactggctcacacctcttgattgccttgagcagtactgaa
gttctctacataaaccgaaatggacagaaggttcgaccactggcacggtggaaggggcag
cttgtggagagtgtgggctggaacaaagccctgggcacagagagcagcactggacccatc
ctagtaggtacagcccagggccagatctttgaggcagaactgtcagccagtgagggtggc
ctttttggtcctgcacctgacctctacttccgcccgctgcatgtactgatggaggaggga
ggcccagcacctgtgtgctccatagaagcagaacgtggccctgatggacgtttttttgtc
attgccactactcgacagcgcctcttccagttcacgggccggatggctgagggggctgag
gtccagggcttttcagggctctttgccacgtatactgatcacccaccaccttttcgagaa
ttccccagcagtctggggtatagtgagttggctttctatacccccaagctgcgctctgcc
ccccgtgcttttgcctggatgatgggagatggtgtactgtatggagcactggactgtggg
cgtcccgattctttactgagtgaagaacgagtgtgggattatcctcctggtgtgggtcct
ggtgccagcccaccactggctattgttttgacccagtttcatttcttgctactcctagca
gaccgagtagaagcagtgtgtacattaacagggcaggtggtgttacgagatcactttcta
gaaaaattcgggccactacgacatatggtgaaagactcctccacaggccacctgtgggct
catactgagcgggctgtgttccgttatcacgttcagcgtgagtcccgggatgtttggcgc
acctatctggatatgaaccgttttgacctagccaaagaatattgccgtgagcgacctgat
tgcctagacacagttctggcccgtgaggctgacttctgcttccgacagcgccgctacgtg
gaaagtgctagatgctatgccctaacccaaagttattttgaagagattgcccttaagttc
ctagaagttcgacaggaggaggccttggcagaattcttgcagaggaaattggcagggctt
aagccaaccgagcgtactcaggccacactgctcactgcctggctgacagaactctacttg
agtcggctaggagcactacaaggtgatgtagatgctttgcctctttatcgtgaaactaga
gaacaattccgcaactttctcagtagcccacgcaacaaagaatggctctttgccagccga
gcctcaatccatgagttgctggccagccatggagatacagaacacatggtgtattttgct
gtgattatgcaggactatgagcgggtagtagcatatcactgccagcatgaagcctatgag
gaggccttggctgtgctctctaagcaccatgatccccagctcttttataaattttcaccc
attctcatccgtcatattcctcgacagctagtggatgcttggattgatctgggcagccgg
ctggatgcccggcagctcatcccagccctggtgaactacagccaaggtggggaagcccag
caagtgagccatgccatccgctacatggaattctgtgtgaatgtgctaggagagactgag
caagccattcacaactacctgctctcattgtatgcacgaggtcaggctgcctcattgctg
gcctacttggagcaagcagggaccagtcctcaccgggtacactatgacctcaaatatgcc
ctgagactgtgtgcagagcatggccataaccgggcttgtgttcatgtctacaaagtgttg
gaactctatgaagaggctgtcgacttggctctccaggtggatgtggacctggccaaacag
tgtgcagacctgccagaggaggatgaggagctgcgtaagaaactgtggctcaaaatcgct
cggcatgtggtacaagaagaagaagatgtgaagaccgccatggcctgtctggctagttgt
cctctcctcaaaatagaggatgtgctgcccttctttcctgactttgtcactattgaccac
ttcaaggaagccatctgcagctctctgcaagcctacaaccggcacattgatgagcttcaa
cgggagatggaggaggctacagctagtgcccagaggattcggcgagatctgcaggagctt
cgtgggcgctatggcactgtggagcctcaagacaagtgctcagcctgcgactttcccctg
ctcaatcgtcctttttatgtctttctttgcagtcacatgttccatgctgactgcctcctg
caggctgttaggcctgggctccctgcctataagcaggcccgcctggaggagctacagaga
aaattaggggctactccacctcctgccaaaggcccaccccgcacaaaagatggagaagga
gggactccaggggcaccgagccgggaacagctgaaagctgacctggatgagctggtggca
gctgaatgtgtctactgtggtgagctgatgatccgttccattgatcggcctttcatcgat
ccccaacggtatgaagaagaacatcaaagctggctttag
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