KEGG   Monodelphis domestica (gray short-tailed opossum): 100027887
Entry
100027887         CDS       T01031                                 
Name
(RefSeq) collagen alpha-1(II) chain
  KO
K19719  collagen type II alpha
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04151  PI3K-Akt signaling pathway
mdo04510  Focal adhesion
mdo04512  ECM-receptor interaction
mdo04518  Integrin signaling
mdo04974  Protein digestion and absorption
mdo05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    100027887
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100027887
   04518 Integrin signaling
    100027887
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100027887
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    100027887
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100027887
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:mdo00536]
    100027887
Glycosaminoglycan binding proteins [BR:mdo00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100027887
SSDB
Motif
Pfam: Collagen COLFI
Other DBs
NCBI-GeneID: 100027887
NCBI-ProteinID: XP_016282513
LinkDB
Position
Unknown
AA seq 1057 aa
MNFIRISSVPRKGYVDCLDLLIFNFPQEASRFLVDFSFVLSPQGPAGPQGPPGPAGEEGK
RGARGEPGAAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLGGPKGANGDPGR
PGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGA
NGEAGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPVGERGEQGAPGPSGFQGLPGP
PGSPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGARGLPGTPGTDGP
KGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGP
IGPPGPAGPNGEKGESGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGE
QGPSGQKGDSGSPGPQGPSGAPGPQGPTGVTGPKGTRGAQGPPGATGFPGAAGRVGPPGS
NGNPGPPGPPGASGKDGPKGSRGDTGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGPDGP
PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGSGDRGPPGPVGPPGLTGP
SGEPGREGSPGADGPPGRDGAAGVKGDRGETGPVGGPGAPGPPGSPGPVGPTGKQGDRGE
SGAQGPMGPAGPAGARGIAGPQGPRGDKGETGEAGERGLKGHRGFTGLQGLPGPPGPSGD
QGASGPAGPSGPRGPPGPVGPSGKDGSNGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGP
PGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQAAGNLRQHDAEVDATLKSLNNQIESIR
SPEGSRKNPARTCRDLQLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGETCVYPNPNS
VPKKNWWSSKGKEKKHVWFGETINGGFHFSYGDDNLAPNTANVQMTFLRLLSTEGSQNIT
YHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYSVLKDGCTKHTGKWGKTVI
EYRSQKTSRLPIIDIAPMDIGGADQEFGVDIGPVCFL
NT seq 3174 nt   +upstreamnt  +downstreamnt
atgaatttcatcagaatatcttctgttcccaggaaaggctatgtggactgtttagattta
ctaatatttaacttcccccaagaagcatccagattcttagtagacttttcttttgtgctt
tcccctcagggtcctgctggacctcagggacctcctggcccagctggtgaagaaggcaag
agaggtgctcgtggggagcctggtgctgctggacctgttggtcctcctggagagagaggt
gctcctggcaaccgtggtttcccagggcaggatggtcttgcaggtcccaagggagcccct
ggtgaacgtggacccagtggtcttggtggtcccaaaggagccaatggtgaccctggtcgt
cctggagaacctggcctccctggagccagaggtctaactggtcgccctggtgatgctggc
cctcaaggcaaagtcggtccttctggagcccctggtgaggatggtcgtcctgggcctcca
ggaccccagggagctcgtgggcaacctggtgtcatgggattccctggtcctaaaggtgcc
aatggggaagctggcaaagctggtgagaagggactacctggtgctcctggacttagaggt
cttcctggcaaggatggtgaaacaggtgctgcaggaccccctggaccagcgggtcctgtt
ggtgagaggggtgaacagggtgctcctggaccatctggcttccagggacttcctggccct
cctggctctccaggtgaaggtggaaaaccaggtgatcagggtgttcccggtgaagctggt
gctcctggcctcgtgggtcccagaggtgaacgtggtttcccaggcgaacgtggatctcct
ggtgctcaaggtctacagggtgcccggggtctccctggaactcctggaactgatggtcct
aaaggtgcaactggtccagctggccctaatggtgctcaaggtcccccaggtctgcaagga
atgcctggtgagagaggtgcagctggtattgctgggccaaaaggagacagaggtgatgtt
ggtgaaaaaggcccagagggagctcctggcaaagatggcggcagaggtctgactggtcca
attggtccccctggccctgctggccccaatggcgagaagggtgaatctggtccccctggt
cctgctggaactgctggtgcccgtggtgccccaggtgaacgtggagagactggaccccct
ggcccagctggatttgcaggccctcctggtgctgatggtcagcctggtgctaagggtgag
caaggaccatctggccagaagggagattctggttcccctggtcctcagggtccatctgga
gcacctgggcctcagggtccaactggagtgactggtcctaaaggaacccgtggtgcccag
ggtcctcctggagctactggattcccaggagctgctggccgtgttggacctccaggttcc
aatggtaatcctggtccccctggtcctcctggagcttctggaaaagatggtcccaaagga
tctcgaggagatactggtcccccaggtcgggctggtgatcctggtcttcaaggtcctgct
ggtgcccctggtgagaaaggagagcctggagatgatggtccctcaggtcctgatggtcct
cccggtccccagggtttggctggtcaaagaggaattgttggattgcctggtcaacgtggt
gaaagaggcttccctggtctacctggcccttcaggtgagcctggcaagcagggagctccc
ggaggttctggagatcgtggtcctcctggtcctgtggggcctcctggtttaactggtcct
tctggtgaacctgggcgtgagggaagtcctggtgctgatgggcctccaggcagagatggt
gcagcaggagtcaagggtgatcgtggtgaaacaggtcctgttggtggtcctggagctcct
ggaccccctggttctcctggacccgttggaccaaccggcaaacagggagacagaggagaa
tctggtgcacaagggcccatgggtcctgcaggaccagctggagcaaggggaattgcaggt
cctcaaggtccccgtggtgacaaaggagaaactggagaggctggtgagagaggactgaag
ggacaccgtggtttcactggtcttcaaggtctccctggtccccctggtccttctggagat
caaggtgcctctggtcctgctggtccttctggtccccgaggtccacctggcccagtgggt
ccttctggtaaagatggctccaatggaatccctggccccattggtccccctggtcctcga
ggtcgctctggtgaaactggccctgctggtcctcctggaaatcctggacctcctggacct
ccaggtccccctggtcctggcattgacatgtctgcctttgctggcttgggccagagagag
aagggccctgaccccctgcaatacatgagagccgaccaagcagctggcaacctgcgacaa
catgatgctgaggtggatgccaccctcaagtccctcaacaaccagattgaaagcatccga
agccctgagggctctcgcaagaacccagctcgcacttgccgagacctgcaactctgtcac
cctgaatggaagagcggagactactggattgaccccaaccagggctgcaccttggatgct
atgaaagttttctgcaacatggagactggtgagacatgtgtctaccccaacccaaacagt
gtccccaagaagaactggtggagcagcaagggcaaggaaaagaaacacgtctggtttgga
gaaaccatcaatggtggcttccatttcagctatggagatgacaacctggcccccaacact
gccaacgtccagatgaccttcctccgcttgttgtccactgagggttcccagaacatcacc
taccactgtaagaacagcattgcctacttggatgaggcagctggtaacctcaagaaggct
ttgctgatccagggatctaacgatgtcgagattcgggctgagggcaacagcagattcaca
tacagcgtgctgaaagatggctgcacgaaacacactggtaagtggggcaagacagtcatc
gagtaccgatcacagaagacctcccgtcttcccatcattgacattgcacctatggacatt
gggggggctgatcaggaatttggtgtggacatcggccctgtctgcttcttgtaa

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