Monodelphis domestica (gray short-tailed opossum): 100028418
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Entry
100028418 CDS
T01031
Symbol
PRPF4B
Name
(RefSeq) pre-mRNA processing factor 4B
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mdo01001
]
100028418 (PRPF4B)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdo03041
]
100028418 (PRPF4B)
Enzymes [BR:
mdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
100028418 (PRPF4B)
Protein kinases [BR:
mdo01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
100028418 (PRPF4B)
Spliceosome [BR:
mdo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100028418 (PRPF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Pox_ser-thr_kin
ABC1
CoV_S1_C
Motif
Other DBs
NCBI-GeneID:
100028418
NCBI-ProteinID:
XP_001378453
Ensembl:
ENSMODG00000009756
LinkDB
All DBs
Position
3:complement(341906200..341958052)
Genome browser
AA seq
1038 aa
AA seq
DB search
MRDDSLLTTTFPCPGSRSRCRQGVGKFKMAAVESQPPREAPEMEDADNSEKSINEENGEV
SEEDPSQNKHSRHKKKKHKHRNKHKKHKHSSEDDKDKKHKHKHKHKKHKRKEVIDASDKE
GASPAKRTKIDDLALLEDLEKQRALIKAELDNELMEGKVQSGMGLILQGYESGSEEEGEI
HEKARNGNRSTARSSNTKGKLELVDNKNSSKKRSKSRSKERTRHRSDKKKSKGSIEGVKE
KTTRSKSKERKKSKSPSKRSKSQDQARKSKSPALKRRSQEKIGKAKSPTEDKIKLEDKSK
SKDRKKSPIINESKSRDRGKKSKSPIELRSKSKDRRSRSKDRKSKRSEIDKEKKPIKSPS
KDASSGKENRSPSRRPGRSPKGKSLSPKQRDKSRRSRSPLLNDRRSKQSKSPSRTLSPGR
RAKSRSVERKRREPERRRLSSPRTRPRDDILSRRERSKDVSPISRWSPTRRRSSRSPIRR
RSRSPLRRSRSPRRRSRSPRRRDRGRRSRSRLRRRSRSRGGRRRRSRSKVKEDKFKGSLS
EGMKVEQESSSDDNLEDFDVEEEDEEALIEQRRIQRQAIVQKYKYLAEDSNMSMPSEPSS
PQSSTRTRSPSPDDILERVAADVKEYERENVDTFEASVKAKHNLMTVEQNNGSTQKKLLA
PDMFTESDDMFAAYFDSARLRAAGIGKDFKENPNLRDNWTDAEGYYRVNIGEVLDKRYNV
YGYTGQGVFSNVVRARDMARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFH
CLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRC
NILHADIKPDNILVNESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYG
IDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNF
MYIEVDKVTEREKVTVMSTINPTKDLLADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPA
KRISINQALQHAFIQEKI
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacgattcccttctaactactaccttcccctgtcccggcagccgcagccgctgc
cgccaaggagtcgggaagttcaaaatggccgccgtcgagtctcagccgccgcgggaagcg
cctgaaatggaagatgcagataattctgaaaagagcataaatgaagaaaatggagaagtg
tcggaggaggacccatctcaaaataagcacagtcgacacaaaaaaaagaagcacaaacat
agaaacaaacacaagaaacataaacattcttcagaagatgacaaggacaaaaaacataaa
cataagcataaacataagaaacataaacgaaaagaggttattgatgcctctgacaaagaa
ggggcatctccagcaaaaagaactaaaattgatgacttagctttgctggaagatttggaa
aaacagagagctttaattaaagctgaacttgataatgagttgatggaaggaaaagtccag
tctggaatggggctaatattacagggttatgagtcaggctccgaagaagagggagaaata
catgagaaggcgagaaatgggaatagatcaactgctaggtcatcaaacactaagggaaaa
cttgaactcgtagacaataaaaatagttcaaagaaacgaagcaaaagcagatcaaaagaa
cggactagacatagatctgataaaaagaaaagcaagggaagcattgaaggagttaaagaa
aaaacaaccagaagtaagtctaaggaaagaaaaaagtccaagagtccatctaaaagaagc
aaatctcaagatcaagcaagaaaatcaaaatccccagcacttaaaaggcgatctcaggag
aaaattggaaaggccaaatcccctactgaggataagattaaattagaagataaaagtaaa
tcaaaagatagaaagaaatctccaattataaatgaaagcaaaagtcgtgatcgtgggaaa
aaatccaaatctccaatagaactaagaagcaaatccaaagacagaaggtcaagatccaaa
gatagaaaatccaaaagatctgagattgacaaagaaaagaagccaattaaatctccctct
aaagatgcttcctctggaaaagaaaataggtccccaagtagaagaccaggtcgtagtcct
aaaggaaaaagtttatctccaaaacagcgtgataaatccagaaggagtaggtcccctcta
cttaatgatcggagatccaagcaaagtaaatcaccatctcggactctgtctcctggtaga
agagctaagagtcgatcagtggaaagaaaacgaagagaaccagaaaggagaagactttct
tctccaagaacacgtcctagggatgatattcttagcagacgtgagagatcaaaagatgtc
agtcctattagtagatggtccccaaccagaagaagatcaagtaggtctcctatccgcagg
agatctcgttcaccactcagacgaagccggtctccaaggagaagaagcaggtccccaaga
agaagagatagaggtaggcggagtagatctcgacttcgacgtcggtctcgatcaaggggt
ggtcgtaggcgcagaagcagaagcaaagtaaaggaagataaatttaaaggaagcctttct
gaaggaatgaaagttgaacaggaatcatcatctgatgataacctagaagactttgatgtt
gaagaagaagatgaagaagccctaatagagcagagaagaatccaaaggcaggcaattgtt
cagaaatacaaataccttgctgaggatagcaatatgtctatgccatctgagccaagcagc
cctcagagtagcactcgaacacgttcaccatctcctgatgacattttagaacgggttgct
gctgatgttaaagaatatgaaagggaaaatgttgatacatttgaggcttctgtaaaagcc
aagcacaatcttatgacagttgaacaaaataatggttctactcagaagaaactattggca
cctgacatgttcacagaatcagatgatatgtttgctgcatattttgatagtgctcgtctt
cgggctgctggcattggaaaagatttcaaagaaaatcccaacctcagggataattggact
gatgcagaaggctattaccgtgttaacataggtgaagtcctagacaaacgttacaatgtg
tatggctacactggacagggtgtcttcagtaatgtagtgagagccagagatatggcaaga
gcaaaccaggaagtggcagtgaaaatcatcaggaacaatgagcttatgcaaaaaacgggg
ttaaaagaactggaatttttgaaaaagcttaatgatgctgatcctgatgacaaatttcat
tgtttacggctcttccgacacttttaccataaacaacatctctgccttgtgtttgagcct
ctaagtatgaatttacgagaggtattgaaaaagtatggaaaggatgtcggtctccatatt
aaggctgtaagatcctatagtcagcagttgttcttggcattgaaacttcttaaaaggtgc
aacattctacatgctgatatcaagccagacaatatcttggttaatgaatcaaaaactatt
ctaaagctttgtgattttggatcagcttcacatgttgcagataatgacattacaccctat
ctcgtcagtagattttatcgtgctcctgaaattattataggaaaaagctatgactatggt
atagatatgtggtctgtaggctgcacattatatgaactttatactggaaaaatattattt
cctggtaaaaccaataatcatatgttgaaacttgctatggacctcaaagggaaaatgcca
aataagatgataagaaaaggtgtgttcaaagatcagcactttgatcaaaatctcaacttc
atgtacatagaagtagataaagtaacagaaagggagaaagttactgtcatgagcaccatt
aatcctaccaaggacctcttggctgatttgattgggtgccagagacttcctgaagaccaa
cgcaaaaaagtacaccagctaaaggacttgttggaccagatcttaatgttggacccagct
aaacgaattagcatcaaccaggctctacagcatgccttcatccaggaaaaaatttaa
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