Monodelphis domestica (gray short-tailed opossum): 100028420
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Entry
100028420 CDS
T01031
Symbol
LHX5
Name
(RefSeq) LIM homeobox 5
KO
K18493
LIM homeobox protein 5
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100028420 (LHX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100028420 (LHX5)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
100028420 (LHX5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
100028420
NCBI-ProteinID:
XP_001378455
Ensembl:
ENSMODG00000027538
LinkDB
All DBs
Position
3:495687494..495695647
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AA seq
303 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDYL
NSPSVKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETTNNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGGKQRSVKFSLLPVPAPRSLE
CSP
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcattgtgccggctgcgagcggcccatcctggaccggtttctgctcaacgtc
ctggaccgcgcgtggcacattaagtgtgttcaatgttgcgagtgcaaatgtaacctcaca
gagaagtgtttctcgcgggaagggaaactctattgcaagaacgacttcttcaggcggttt
ggcaccaaatgtgctgggtgtgcgcagggaatctcccccagcgacctggttcggaaggcc
cgaagcaaagtatttcacctcaactgtttcacctgcatggtctgcaacaagcaactgtcc
actggcgaggaactctatattatagatgagaacaaatttgtttgcaaagaggactatttg
aactcgcccagtgtcaaggaaggcagcctaaactcagtgtcatcctgtaccgaccgaagt
ttatccccggacctccaggacccgctccaggacgaccccaaagagactgacaactcgacg
tcatcggacaaggaaaccacgaacaacgagaacgaagagcagaattccggcaccaagaga
cgggggccgcgcaccaccatcaaggccaagcagctggaaacactcaaggccgccttcgct
gccacacccaagcccacacgccacattcgggaacagctggctcaagagacaggtctcaac
atgcgggtcatccaggtctggttccagaatcgccggtccaaggagcgtagaatgaagcag
ctgagtgctctgggtgcgcggagacacgctttcttcaggagtccgcggcgcatgcgtcca
ttgggcggccggctggatgagtcggagatgctggggtccaccccctacacttactacgga
ggtaagcagcgctctgtgaagttttctctgcttcccgtcccagcgcccaggtccctggag
tgctccccgtaa
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