Monodelphis domestica (gray short-tailed opossum): 100028429
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Entry
100028429 CDS
T01031
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes 1B
KO
K06636
structural maintenance of chromosome 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04110
Cell cycle
mdo04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100028429 (SMC1B)
04114 Oocyte meiosis
100028429 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdo03036
]
100028429 (SMC1B)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100028429 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
100028429 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
100028429
NCBI-ProteinID:
XP_001378464
Ensembl:
ENSMODG00000007253
UniProt:
F6VWT2
LinkDB
All DBs
Position
8:complement(10534577..10611354)
Genome browser
AA seq
1283 aa
AA seq
DB search
MPREFPSASLLLPPTPLPSPSRAYLRRHLASSTRPGVSSLAAVMGRLDRLLVENFKSWRG
RQVLGPFRGFTCIVGPNGSGKSNVMDALSFVMGERTSNLRVKSLQELIHGAHVGRPSATT
ASVLAVYVEDNGEEKTFRRTIRGGSSEFHFNDNPISRSAYTAELEKIGIIVKARNCLVFQ
GTVESISMKKPKERTQFFEEISNSKELIDEYEKKKKKVQKAEEDAQFNFNKKKNVAAERK
HAKLEKEEADRYQALLEDLKEKKIQLQLFQLYHNEKRIQFLSSELDEMNKEMALTKESLS
DEENIVKTRKKELGRLTRELQQMEKEMKALEAVLNQKRPQYIKAKENTSHHLKKLETAKK
AIRVSEKQCTKQEDDIQALEKELWDLDRTWRNFEKQVEEERLRRGRDIELEASQLDQYKE
LKEQVIKKVATMTQQLEKLQWEQRADEERLAFGDRRRAEVQGNLKQVKEQVEDHNKRIEK
LEEYTSTCIDCLKEKTQQEEALSEELEQSRVRMAEVNSELSRIGGELQNAHIDHHEGKRQ
QKKAEVLEFLKRLYPESVYGRLLDLCHPIHKKYQLAVTKLFGRYMVAIVVVSEKVARDCI
RFLKEERAEPETFLALDYLDIKPINERLREMKGSKMVIDVVQTQLPQLKKVIQFVCGNGL
VCETVEEARHMAFDGPERLKTVALDGTLFLKSGVISGGSSDLKLKARCWDEKEINKLKER
RDQLIRELKDLMKIRRKETDLKQIQALVQGTHTRLKYSQNELETIKKKHLARFNKEQSQL
QSELLNIESQYVMLSDGIEKRIRQITDFQEKIDKVEDEIFHDFCEEIGVENIREYENQQV
KQQQEIDKKRLEFEKLKTRLNIQLEYSHNQLKKKTNKVTTLKEAIVKDTEDLESLKKVEE
NCLQVVDDLMTKRQQLKDVCVAQNVSIEKAQGQVEEARKKFLISNREVGKMQKEMAAVQT
ALEQQRLEKHNILLSCKVQDIEVALVAGSLDETIQVALGEQAESTQSTVAAMYEREGALQ
IDYSSLAEDLKDLQSDKEIKAQLGLLEQQLATHEDILLKTTAPNLRALQNLQNVRDKFQE
SIDAFEASRKEARVCRQEFEQVKKKRYDLFSQCFEHVSVSIDQIYKKLCRNNSAQAFLSP
ENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDA
ALDNTNIGKVSSYIREQTREQFQMIIISLKEEFYSKADALVGIYPEQGDCMFSRVLTLDL
SLYPDSDTREHRSRRRDNRSRFT
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgagaattcccctctgcctctctcctccttcctccgacgccgctgccgtctcct
tcccgcgcttacctccgccgccatcttgcgtcctcgacgcgcccgggggtctcctccctt
gccgccgtcatgggtcgcctggaccggctgctcgtggagaacttcaagtcgtggcgcggc
cgccaggtcctcgggccctttcgcggtttcacatgcatcgtcggccccaacggctccgga
aagtcaaacgtgatggatgcgctgagcttcgtgatgggtgaaaggacgagcaacctgcgt
gtgaagagcctgcaggagctgatccacggcgcacatgtgggccgcccgtccgccaccacg
gccagcgtactggcagtatatgtggaggacaacggcgaggaaaagacgttccgaaggacc
atccggggagggtcatcagaatttcattttaatgataatcctatcagtcgttctgcctac
acagctgagttggaaaaaattggcatcattgtcaaagctaggaattgcctcgtttttcag
ggcactgtagaatccatttcaatgaaaaagcccaaagagagaactcagttttttgaagaa
attagcaattcaaaagagcttattgatgaatatgagaaaaagaagaaaaaggtacagaaa
gctgaagaggatgcccaatttaattttaataagaaaaaaaatgtggctgctgaacgcaaa
catgccaaattagagaaagaagaggctgaccgctaccaggccctcctcgaggacctgaaa
gagaagaaaatccagctacagcttttccagctttaccacaatgagaaaagaattcagttt
ctgtcaagtgaattagatgaaatgaacaaggagatggctctcaccaaagaatccctttct
gatgaggaaaacatagtgaagaccagaaaaaaagagctgggcaggctaaccagagagctg
cagcagatggagaaggagatgaaggctcttgaagctgtgctgaaccagaagaggccccag
tatatcaaggccaaagaaaatacctcacaccacctcaagaagctagagactgccaagaag
gccatccgagtcagtgagaagcagtgcaccaagcaagaagatgacatccaagctctggaa
aaagaactgtgggacttagacaggacatggaggaattttgaaaagcaggttgaagaagag
aggctgcgtcgtgggagggacatcgagttggaagccagccagctggatcagtacaaggag
ctcaaggaacaagtgatcaagaaagtggcaaccatgacccagcagctggaaaagctgcag
tgggagcaaagggcagatgaggaaagactggcatttggggacaggaggcgagcagaagtc
cagggaaatttaaagcaagtaaaggaacaggtagaggaccataataagcgcatcgagaag
ttggaggagtataccagcacatgcattgattgtttgaaagagaagacacaacaagaagaa
gccctttctgaggagcttgagcagtctagggtccgaatggctgaagtgaacagcgaattg
agtcgtattggaggggaattacaaaatgcacacattgatcaccatgagggcaagcggcaa
caaaagaaagctgaggttctggagttcctgaaaaggctttatcctgagtctgtgtatggc
agactgcttgatttatgtcatcctatacataagaagtaccagcttgctgtgaccaagctc
ttcggcaggtacatggtagctattgttgtagtttctgaaaaagtagcaagagattgcatc
cgattcctgaaagaggaaagagctgagcctgagacattccttgctctggattaccttgat
atcaaacccatcaatgaaagactgagggagatgaaaggctccaaaatggtaatagatgtc
gtgcagacacaacttccacagctaaagaaagtcattcaatttgtgtgtggcaatgggctt
gtgtgtgagactgtagaagaagcccggcacatggccttcgatgggcctgagcggctgaag
acggtggctcttgatggaacattgtttttgaaatctggagtaatatctggaggatcaagt
gacttaaaactcaaagcaaggtgctgggatgaaaaggaaataaacaagctcaaggagaga
cgagaccagctcatcagggagttaaaggacttaatgaaaatacgacgcaaagaaacagat
ttgaaacaaatccaggctttggtacaaggaactcatacacgtctcaaatattctcaaaat
gaactggagacaattaaaaagaagcatcttgctcgttttaacaaggaacagtcccagctc
caaagtgaattactgaacattgaatctcagtacgtgatgctgagtgatggcattgagaaa
agaatccgacaaatcacagattttcaagaaaagatagataaggtagaagatgaaattttc
catgacttttgtgaagaaattggcgtagaaaatattcgcgaatatgaaaaccagcaagtg
aaacaacagcaagaaattgacaaaaagaggctcgagtttgagaagctgaagactcggctc
aacattcagctggaatatagccataatcagctgaagaagaaaaccaataaggtcacaacc
ctgaaagaagccattgtcaaagatacagaagaccttgagagtctgaagaaggtggaagaa
aactgcctacaagttgtggatgacctcatgaccaaacggcagcaactaaaggatgtgtgt
gttgctcagaatgttagcattgaaaaggcacagggccaggtggaggaagctcgaaagaaa
tttttgatcagcaatagggaggtggggaagatgcagaaggagatggcagctgtccagacg
gccctcgaacagcagcggctggagaagcacaacattctgctgagctgcaaggtgcaggac
atcgaggttgcccttgtggccggctccctggacgagaccatccaagtggcgctcggagag
caagctgagagcacacaaagcacagtggcagccatgtatgagagagaaggggccctacag
atagactacagcagccttgctgaagacctgaaggatctgcagtctgataaggagatcaag
gctcagctggggctccttgagcagcagctggccacacatgaggacattctcctgaagacc
actgcccccaaccttcgggccctgcagaacctgcagaatgtcagagacaagttccaggag
tctattgatgcttttgaggccagcaggaaggaggcaagggtctgtaggcaggagtttgag
caggtaaagaagaaacgatatgatctcttcagccagtgctttgagcacgtctctgtgtcc
attgatcagatctacaaaaaactttgcaggaacaacagtgcccaggcctttctgagccca
gagaaccctgaagaaccttatctggaagggatcagctacaactgtgtggctcctgggaag
cgtttcatgcccatggacaacttatcagggggagagaagtgcgtggctgcattggccctc
ctttttgctgtgcacagcttccgcccagcacctttctttgtccttgatgaagtagatgcg
gccttggacaacacaaacattggcaaagtgtccagctacatccgggagcagacccgagag
cagtttcagatgatcatcatttccctcaaggaggagttctactctaaagcagatgctctg
gtcggcatctaccccgagcaaggggactgcatgttcagccgagtcctgaccctggacctg
tctttgtatccagacagtgacacccgggaacatcgcagcaggcgccgagacaaccgctcg
aggttcacctag
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integrated database retrieval system
